RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 KLHL10Q6JEL2 608 aa19.17■□□□□ 0.66
LINC00271-201ENST00000421378 ARMCX5Q6P1M9 558 aa19.17■□□□□ 0.66
LINC00271-201ENST00000421378 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.17■□□□□ 0.66
LINC00271-201ENST00000421378 DHTKD1Q96HY7 919 aaPredicted RBP19.17■□□□□ 0.66
LINC00271-201ENST00000421378 MSTO1Q9BUK6 570 aa19.17■□□□□ 0.66
LINC00271-201ENST00000421378 HAPLN2Q9GZV7 340 aa19.17■□□□□ 0.66
LINC00271-201ENST00000421378 NXF3Q9H4D5 531 aaKnown RBP19.17■□□□□ 0.66
LINC00271-201ENST00000421378 CXXC1Q9P0U4 656 aaPredicted RBP19.17■□□□□ 0.66
LINC00271-201ENST00000421378 CGNQ9P2M7 1197 aaKnown RBP19.17■□□□□ 0.66
LINC00271-201ENST00000421378 IPPQ9Y573 584 aa19.17■□□□□ 0.66
LINC00271-201ENST00000421378 AMHP03971 560 aa19.16■□□□□ 0.66
LINC00271-201ENST00000421378 GARTP22102 1010 aa19.16■□□□□ 0.66
LINC00271-201ENST00000421378 ECHDC2Q86YB7 292 aa19.16■□□□□ 0.66
LINC00271-201ENST00000421378 CBWD1Q9BRT8 395 aa19.16■□□□□ 0.66
LINC00271-201ENST00000421378 DACH1Q9UI36 760 aa19.16■□□□□ 0.66
LINC00271-201ENST00000421378 TRAF3IP3Q9Y228 551 aa19.16■□□□□ 0.66
LINC00271-201ENST00000421378 CALUO43852 315 aaPredicted RBP19.15■□□□□ 0.66
LINC00271-201ENST00000421378 ZNF623O75123 536 aa19.15■□□□□ 0.66
LINC00271-201ENST00000421378 FAM189BP81408 668 aa19.15■□□□□ 0.66
LINC00271-201ENST00000421378 DEFB103AP81534 67 aa19.15■□□□□ 0.66
LINC00271-201ENST00000421378 STX1AQ16623 288 aa19.15■□□□□ 0.66
LINC00271-201ENST00000421378 C9orf50Q5SZB4 431 aa19.15■□□□□ 0.66
LINC00271-201ENST00000421378 CENPPQ6IPU0 288 aa19.15■□□□□ 0.66
LINC00271-201ENST00000421378 HACE1Q8IYU2 909 aa19.15■□□□□ 0.66
LINC00271-201ENST00000421378 SMG8Q8ND04 991 aaKnown RBP19.15■□□□□ 0.66
LINC00271-201ENST00000421378 P2RX5Q93086 422 aa19.15■□□□□ 0.66
LINC00271-201ENST00000421378 RNPC3Q96LT9 517 aaKnown RBP19.15■□□□□ 0.66
LINC00271-201ENST00000421378 SEMA6BQ9H3T3 888 aa19.15■□□□□ 0.66
LINC00271-201ENST00000421378 ANO10Q9NW15 660 aa19.15■□□□□ 0.66
LINC00271-201ENST00000421378 RNF216Q9NWF9 866 aaPredicted RBP19.15■□□□□ 0.66
LINC00271-201ENST00000421378 TMEM161AQ9NX61 479 aa19.15■□□□□ 0.66
LINC00271-201ENST00000421378 AGO2Q9UKV8 859 aaKnown RBP19.15■□□□□ 0.66
LINC00271-201ENST00000421378 CTNND2Q9UQB3 1225 aa19.15■□□□□ 0.66
LINC00271-201ENST00000421378 HES2Q9Y543 173 aa19.15■□□□□ 0.66
LINC00271-201ENST00000421378 TTC3P53804 2025 aa19.15■□□□□ 0.66
LINC00271-201ENST00000421378 CLIC2O15247 247 aa19.15■□□□□ 0.66
LINC00271-201ENST00000421378 EOMESO95936 686 aa19.15■□□□□ 0.66
LINC00271-201ENST00000421378 ATF7P17544 494 aaPredicted RBP19.15■□□□□ 0.66
LINC00271-201ENST00000421378 TYRO3Q06418 890 aa19.15■□□□□ 0.66
LINC00271-201ENST00000421378 PAK1Q13153 545 aa19.15■□□□□ 0.66
LINC00271-201ENST00000421378 SHHQ15465 462 aa19.15■□□□□ 0.66
LINC00271-201ENST00000421378 ZCWPW2Q504Y3 356 aa19.15■□□□□ 0.66
LINC00271-201ENST00000421378 THNSL1Q8IYQ7 743 aa19.15■□□□□ 0.66
LINC00271-201ENST00000421378 CEP120Q8N960 986 aa19.15■□□□□ 0.66
LINC00271-201ENST00000421378 RNF169Q8NCN4 708 aa19.15■□□□□ 0.66
LINC00271-201ENST00000421378 NELFBQ8WX92 580 aa19.15■□□□□ 0.66
LINC00271-201ENST00000421378 TSG101Q99816 390 aa19.15■□□□□ 0.66
LINC00271-201ENST00000421378 ELAC1Q9H777 363 aaKnown RBP19.15■□□□□ 0.66
LINC00271-201ENST00000421378 LRFN2Q9ULH4 789 aa19.15■□□□□ 0.66
LINC00271-201ENST00000421378 PCDHB7Q9Y5E2 793 aa19.15■□□□□ 0.66
LINC00271-201ENST00000421378 SLC4A7Q9Y6M7 1214 aa19.15■□□□□ 0.66
LINC00271-201ENST00000421378 BICDL2A1A5D9 508 aa19.14■□□□□ 0.65
LINC00271-201ENST00000421378 KIAA0391O15091 583 aaKnown RBP19.14■□□□□ 0.65
LINC00271-201ENST00000421378 OGTO15294 1046 aa19.14■□□□□ 0.65
LINC00271-201ENST00000421378 STAG3L1P0CL83 205 aa19.14■□□□□ 0.65
LINC00271-201ENST00000421378 CCDC192P0DO97 292 aa19.14■□□□□ 0.65
LINC00271-201ENST00000421378 CCNE1P24864 410 aa19.14■□□□□ 0.65
LINC00271-201ENST00000421378 BMP8BP34820 402 aa19.14■□□□□ 0.65
LINC00271-201ENST00000421378 GRM5P41594 1212 aa19.14■□□□□ 0.65
LINC00271-201ENST00000421378 PMS1P54277 932 aaKnown RBP19.14■□□□□ 0.65
LINC00271-201ENST00000421378 OSTNP61366 133 aa19.14■□□□□ 0.65
LINC00271-201ENST00000421378 LRRC63Q05C16 580 aa19.14■□□□□ 0.65
LINC00271-201ENST00000421378 RASIP1Q5U651 963 aa19.14■□□□□ 0.65
LINC00271-201ENST00000421378 ZNF598Q86UK7 904 aaKnown RBP19.14■□□□□ 0.65
LINC00271-201ENST00000421378 NPAS4Q8IUM7 802 aa19.14■□□□□ 0.65
LINC00271-201ENST00000421378 C12orf56Q8IXR9 622 aa19.14■□□□□ 0.65
LINC00271-201ENST00000421378 PGBD4Q96DM1 585 aa19.14■□□□□ 0.65
LINC00271-201ENST00000421378 APOL6Q9BWW8 343 aa19.14■□□□□ 0.65
LINC00271-201ENST00000421378 PCIF1Q9H4Z3 704 aa19.14■□□□□ 0.65
LINC00271-201ENST00000421378 HSPBP1Q9NZL4 362 aa19.14■□□□□ 0.65
LINC00271-201ENST00000421378 TRIM49BA6NDI0 452 aa19.13■□□□□ 0.65
LINC00271-201ENST00000421378 FAM189A1O60320 539 aa19.13■□□□□ 0.65
LINC00271-201ENST00000421378 UPP2O95045 317 aa19.13■□□□□ 0.65
LINC00271-201ENST00000421378 NR3C1P04150 777 aa19.13■□□□□ 0.65
LINC00271-201ENST00000421378 CYP2J2P51589 502 aa19.13■□□□□ 0.65
LINC00271-201ENST00000421378 KYAT1Q16773 422 aa19.13■□□□□ 0.65
LINC00271-201ENST00000421378 EDRF1Q3B7T1 1238 aa19.13■□□□□ 0.65
LINC00271-201ENST00000421378 SEZ6Q53EL9 994 aa19.13■□□□□ 0.65
LINC00271-201ENST00000421378 MRPL10Q7Z7H8 261 aaKnown RBP19.13■□□□□ 0.65
LINC00271-201ENST00000421378 CRIPAKQ8N1N5 446 aa19.13■□□□□ 0.65
LINC00271-201ENST00000421378 LPPQ93052 612 aa19.13■□□□□ 0.65
LINC00271-201ENST00000421378 TOP1MTQ969P6 601 aa19.13■□□□□ 0.65
LINC00271-201ENST00000421378 SAAL1Q96ER3 474 aa19.13■□□□□ 0.65
LINC00271-201ENST00000421378 SLC9A7Q96T83 725 aa19.13■□□□□ 0.65
LINC00271-201ENST00000421378 CCDC94Q9BW85 323 aaPredicted RBP19.13■□□□□ 0.65
LINC00271-201ENST00000421378 SNTG2Q9NY99 539 aa19.13■□□□□ 0.65
LINC00271-201ENST00000421378 LAMA3Q16787 3333 aa19.13■□□□□ 0.65
LINC00271-201ENST00000421378 MEIS3P2A8K0S8 358 aa19.12■□□□□ 0.65
LINC00271-201ENST00000421378 LDHAP00338 332 aaKnown RBP19.12■□□□□ 0.65
LINC00271-201ENST00000421378 ITGA4P13612 1032 aa19.12■□□□□ 0.65
LINC00271-201ENST00000421378 NR2F2P24468 414 aa19.12■□□□□ 0.65
LINC00271-201ENST00000421378 AKAP5P24588 427 aa19.12■□□□□ 0.65
LINC00271-201ENST00000421378 NFIL3Q16649 462 aa19.12■□□□□ 0.65
LINC00271-201ENST00000421378 ZBTB41Q5SVQ8 909 aa19.12■□□□□ 0.65
LINC00271-201ENST00000421378 ANKRD40Q6AI12 368 aa19.12■□□□□ 0.65
LINC00271-201ENST00000421378 CHRDL2Q6WN34 429 aa19.12■□□□□ 0.65
LINC00271-201ENST00000421378 SLC9A9Q8IVB4 645 aa19.12■□□□□ 0.65
LINC00271-201ENST00000421378 GPD1LQ8N335 351 aa19.12■□□□□ 0.65
LINC00271-201ENST00000421378 NOC3LQ8WTT2 800 aaKnown RBP19.12■□□□□ 0.65
LINC00271-201ENST00000421378 TMEM174Q8WUU8 243 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms