RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 CCDC134Q9H6E4 229 aa13.06□□□□□ -0.32
CLCN4-203ENST00000421085 ENO3P13929 434 aaPredicted RBP13.06□□□□□ -0.32
CLCN4-203ENST00000421085 OSBPP22059 807 aa13.06□□□□□ -0.32
CLCN4-203ENST00000421085 VHLP40337 213 aa13.06□□□□□ -0.32
CLCN4-203ENST00000421085 MDM1Q8TC05 714 aa13.06□□□□□ -0.32
CLCN4-203ENST00000421085 XPO1O14980 1071 aaKnown RBP13.06□□□□□ -0.32
CLCN4-203ENST00000421085 ESRRBO95718 433 aa13.06□□□□□ -0.32
CLCN4-203ENST00000421085 PPARGP37231 505 aaPredicted RBP13.06□□□□□ -0.32
CLCN4-203ENST00000421085 SYCP2LQ5T4T6 812 aa13.06□□□□□ -0.32
CLCN4-203ENST00000421085 C9orf72Q96LT7 481 aa13.06□□□□□ -0.32
CLCN4-203ENST00000421085 CCT7Q99832 543 aa13.06□□□□□ -0.32
CLCN4-203ENST00000421085 FHOD1Q9Y613 1164 aa13.06□□□□□ -0.32
CLCN4-203ENST00000421085 ADCY3O60266 1144 aa13.06□□□□□ -0.32
CLCN4-203ENST00000421085 VCAM1P19320 739 aa13.06□□□□□ -0.32
CLCN4-203ENST00000421085 ITIH2P19823 946 aa13.06□□□□□ -0.32
CLCN4-203ENST00000421085 BCAR1P56945 870 aa13.06□□□□□ -0.32
CLCN4-203ENST00000421085 SLC44A4Q53GD3 710 aa13.06□□□□□ -0.32
CLCN4-203ENST00000421085 SLC27A3Q5K4L6 730 aa13.06□□□□□ -0.32
CLCN4-203ENST00000421085 SZRD1Q7Z422 152 aa13.06□□□□□ -0.32
CLCN4-203ENST00000421085 PLD3Q8IV08 490 aa13.06□□□□□ -0.32
CLCN4-203ENST00000421085 PNKPQ96T60 521 aa13.06□□□□□ -0.32
CLCN4-203ENST00000421085 RTN2O75298 545 aa13.06□□□□□ -0.32
CLCN4-203ENST00000421085 GFAPP14136 432 aa13.06□□□□□ -0.32
CLCN4-203ENST00000421085 STX3Q13277 289 aa13.06□□□□□ -0.32
CLCN4-203ENST00000421085 DDX42Q86XP3 938 aaKnown RBP eCLIP13.06□□□□□ -0.32
CLCN4-203ENST00000421085 HPS3Q969F9 1004 aa13.06□□□□□ -0.32
CLCN4-203ENST00000421085 UNC45AQ9H3U1 944 aa13.06□□□□□ -0.32
CLCN4-203ENST00000421085 RFX1P22670 979 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 KCTD2Q14681 263 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 Q3C1V9 767 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 EPHA10Q5JZY3 1008 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 EP400NLQ6ZTU2 488 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 FRMD5Q7Z6J6 570 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 WDR17Q8IZU2 1322 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 TMEM47Q9BQJ4 181 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 KIAA1586Q9HCI6 787 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 KLHL11Q9NVR0 708 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 STK32BQ9NY57 414 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 ATP7AQ04656 1500 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 CPSF1Q10570 1443 aaKnown RBP13.05□□□□□ -0.32
CLCN4-203ENST00000421085 USP17L15C9J2P7 530 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 USP17L13C9JLJ4 530 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 USP17L11C9JVI0 530 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 USP17L18D6R9N7 530 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 USP17L22D6RA61 530 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 USP17L17D6RBQ6 530 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 USP17L19D6RCP7 530 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 USP17L20D6RJB6 530 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 CLDN3O15551 220 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 COPB2P35606 906 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 STAT3P40763 770 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 USP17L24Q0WX57 530 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 USP17L6PQ6QN14 398 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 KCNK16Q96T55 309 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 PSMC3IPQ9P2W1 217 aaPredicted RBP13.05□□□□□ -0.32
CLCN4-203ENST00000421085 FOXP2O15409 715 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 ATXN8OSP0DMR3 200 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 SCP2P22307 547 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 IFNA8P32881 189 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 IL6STP40189 918 aaPredicted RBP13.05□□□□□ -0.32
CLCN4-203ENST00000421085 SEMA3FQ13275 785 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 EEPD1Q7L9B9 569 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 ZNF555Q8NEP9 628 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 FUT8Q9BYC5 575 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 ZBTB5O15062 677 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 SDC4P31431 198 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 ULK4Q96C45 1275 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 PARVAQ9NVD7 372 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 ATP8B3O60423 1300 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 EMSYQ7Z589 1322 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 M0QYV0 167 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 GUCY1A2P33402 732 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 PSMD7P51665 324 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 ARPP19P56211 112 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 MAP3K7CLP57077 242 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 TRIM60Q495X7 471 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 CDKL3Q8IVW4 592 aaPredicted RBP13.05□□□□□ -0.32
CLCN4-203ENST00000421085 ISCUQ9H1K1 167 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 EML4Q9HC35 981 aaKnown RBP13.05□□□□□ -0.32
CLCN4-203ENST00000421085 MTO1Q9Y2Z2 717 aaKnown RBP13.05□□□□□ -0.32
CLCN4-203ENST00000421085 RCAN1P53805 252 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 CCDC15Q0P6D6 951 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 DPYDQ12882 1025 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 MKRN4PQ13434 485 aaPredicted RBP13.05□□□□□ -0.32
CLCN4-203ENST00000421085 LRRC8BQ6P9F7 803 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 HIC2Q96JB3 615 aa13.05□□□□□ -0.32
CLCN4-203ENST00000421085 GEMIN8Q9NWZ8 242 aaKnown RBP13.05□□□□□ -0.32
CLCN4-203ENST00000421085 MAGEA13PA6NCF6 341 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 TBXAS1P24557 533 aaPredicted RBP13.04□□□□□ -0.32
CLCN4-203ENST00000421085 TARSP26639 723 aaKnown RBP13.04□□□□□ -0.32
CLCN4-203ENST00000421085 RBBP7Q16576 425 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 CDR2LQ86X02 465 aaPredicted RBP13.04□□□□□ -0.32
CLCN4-203ENST00000421085 MMGT1Q8N4V1 131 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 SH3RF3Q8TEJ3 882 aaPredicted RBP13.04□□□□□ -0.32
CLCN4-203ENST00000421085 IFT43Q96FT9 208 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 CELF4Q9BZC1 486 aaKnown RBP13.04□□□□□ -0.32
CLCN4-203ENST00000421085 BFARQ9NZS9 450 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 CYP26A1O43174 497 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 WDR47O94967 919 aa13.04□□□□□ -0.32
CLCN4-203ENST00000421085 ATP6V1B1P15313 513 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms