RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 CDT1Q9H211 546 aa15.83■□□□□ 0.12
PTPN18-204ENST00000420717 PANK4Q9NVE7 773 aa15.83■□□□□ 0.12
PTPN18-204ENST00000420717 LMCD1Q9NZU5 365 aa15.83■□□□□ 0.12
PTPN18-204ENST00000420717 SERTAD1Q9UHV2 236 aa15.83■□□□□ 0.12
PTPN18-204ENST00000420717 STYXL1Q9Y6J8 313 aa15.83■□□□□ 0.12
PTPN18-204ENST00000420717 CITO14578 2027 aa15.82■□□□□ 0.12
PTPN18-204ENST00000420717 FAM189A1O60320 539 aa15.82■□□□□ 0.12
PTPN18-204ENST00000420717 NMT1P30419 496 aaKnown RBP15.82■□□□□ 0.12
PTPN18-204ENST00000420717 GRM5P41594 1212 aa15.82■□□□□ 0.12
PTPN18-204ENST00000420717 ZNF568Q3ZCX4 644 aa15.82■□□□□ 0.12
PTPN18-204ENST00000420717 PAN2Q504Q3 1202 aaKnown RBP15.82■□□□□ 0.12
PTPN18-204ENST00000420717 CDR2LQ86X02 465 aaPredicted RBP15.82■□□□□ 0.12
PTPN18-204ENST00000420717 FMR1NBQ8N0W7 255 aaPredicted RBP15.82■□□□□ 0.12
PTPN18-204ENST00000420717 RNF169Q8NCN4 708 aa15.82■□□□□ 0.12
PTPN18-204ENST00000420717 GSTCDQ8NEC7 633 aa15.82■□□□□ 0.12
PTPN18-204ENST00000420717 FBXO22Q8NEZ5 403 aa15.82■□□□□ 0.12
PTPN18-204ENST00000420717 STAMQ92783 540 aa15.82■□□□□ 0.12
PTPN18-204ENST00000420717 PAGE5Q96GU1 130 aa15.82■□□□□ 0.12
PTPN18-204ENST00000420717 C11orf84Q9BUA3 381 aaPredicted RBP15.82■□□□□ 0.12
PTPN18-204ENST00000420717 LMAN2LQ9H0V9 348 aa15.82■□□□□ 0.12
PTPN18-204ENST00000420717 RNF39Q9H2S5 420 aa15.82■□□□□ 0.12
PTPN18-204ENST00000420717 TBC1D13Q9NVG8 400 aa15.82■□□□□ 0.12
PTPN18-204ENST00000420717 KANSL3Q9P2N6 904 aa15.82■□□□□ 0.12
PTPN18-204ENST00000420717 STXBP5LQ9Y2K9 1186 aa15.82■□□□□ 0.12
PTPN18-204ENST00000420717 UBE4BO95155 1302 aa15.82■□□□□ 0.12
PTPN18-204ENST00000420717 ARL5CA6NH57 179 aa15.81■□□□□ 0.12
PTPN18-204ENST00000420717 HNRNPDLO14979 420 aaKnown RBP15.81■□□□□ 0.12
PTPN18-204ENST00000420717 EIF3DO15371 548 aaKnown RBP eCLIP15.81■□□□□ 0.12
PTPN18-204ENST00000420717 GTPBP6O43824 516 aaPredicted RBP15.81■□□□□ 0.12
PTPN18-204ENST00000420717 KLRC4O43908 158 aa15.81■□□□□ 0.12
PTPN18-204ENST00000420717 IDEP14735 1019 aa15.81■□□□□ 0.12
PTPN18-204ENST00000420717 CTNNB1P35222 781 aa15.81■□□□□ 0.12
PTPN18-204ENST00000420717 ASIC1P78348 528 aa15.81■□□□□ 0.12
PTPN18-204ENST00000420717 FAM160A1Q05DH4 1040 aa15.81■□□□□ 0.12
PTPN18-204ENST00000420717 DSC1Q08554 894 aa15.81■□□□□ 0.12
PTPN18-204ENST00000420717 SNW1Q13573 536 aaKnown RBP15.81■□□□□ 0.12
PTPN18-204ENST00000420717 ADGRE1Q14246 886 aa15.81■□□□□ 0.12
PTPN18-204ENST00000420717 NOLC1Q14978 699 aaKnown RBP eCLIP15.81■□□□□ 0.12
PTPN18-204ENST00000420717 XKR4Q5GH76 650 aa15.81■□□□□ 0.12
PTPN18-204ENST00000420717 HERC4Q5GLZ8 1057 aaPredicted RBP15.81■□□□□ 0.12
PTPN18-204ENST00000420717 L1TD1Q5T7N2 865 aaKnown RBP15.81■□□□□ 0.12
PTPN18-204ENST00000420717 SLC39A4Q6P5W5 647 aa15.81■□□□□ 0.12
PTPN18-204ENST00000420717 KRBA2Q6ZNG9 492 aa15.81■□□□□ 0.12
PTPN18-204ENST00000420717 EPM2AIP1Q7L775 607 aaPredicted RBP15.81■□□□□ 0.12
PTPN18-204ENST00000420717 COLGALT1Q8NBJ5 622 aa15.81■□□□□ 0.12
PTPN18-204ENST00000420717 URGCPQ8TCY9 931 aa15.81■□□□□ 0.12
PTPN18-204ENST00000420717 ARNTL2Q8WYA1 636 aa15.81■□□□□ 0.12
PTPN18-204ENST00000420717 ZHX3Q9H4I2 956 aa15.81■□□□□ 0.12
PTPN18-204ENST00000420717 PRDM12Q9H4Q4 367 aa15.81■□□□□ 0.12
PTPN18-204ENST00000420717 MRPL44Q9H9J2 332 aaKnown RBP15.81■□□□□ 0.12
PTPN18-204ENST00000420717 AAASQ9NRG9 546 aa15.81■□□□□ 0.12
PTPN18-204ENST00000420717 TYW1Q9NV66 732 aaKnown RBP15.81■□□□□ 0.12
PTPN18-204ENST00000420717 USP20Q9Y2K6 914 aa15.81■□□□□ 0.12
PTPN18-204ENST00000420717 HES2Q9Y543 173 aa15.81■□□□□ 0.12
PTPN18-204ENST00000420717 RECQL4O94761 1208 aa15.8■□□□□ 0.12
PTPN18-204ENST00000420717 ZNF202O95125 648 aa15.8■□□□□ 0.12
PTPN18-204ENST00000420717 LIG1P18858 919 aa15.8■□□□□ 0.12
PTPN18-204ENST00000420717 PPM1AP35813 382 aa15.8■□□□□ 0.12
PTPN18-204ENST00000420717 MLH1P40692 756 aa15.8■□□□□ 0.12
PTPN18-204ENST00000420717 CASP5P51878 434 aa15.8■□□□□ 0.12
PTPN18-204ENST00000420717 POU5F1Q01860 360 aaKnown RBP15.8■□□□□ 0.12
PTPN18-204ENST00000420717 UBE3AQ05086 875 aa15.8■□□□□ 0.12
PTPN18-204ENST00000420717 GRIK3Q13003 919 aa15.8■□□□□ 0.12
PTPN18-204ENST00000420717 CUL4BQ13620 913 aa15.8■□□□□ 0.12
PTPN18-204ENST00000420717 KYAT1Q16773 422 aa15.8■□□□□ 0.12
PTPN18-204ENST00000420717 BMT2Q1RMZ1 405 aa15.8■□□□□ 0.12
PTPN18-204ENST00000420717 TMEM132AQ24JP5 1023 aa15.8■□□□□ 0.12
PTPN18-204ENST00000420717 FAM26FQ5R3K3 315 aa15.8■□□□□ 0.12
PTPN18-204ENST00000420717 ELOA2Q8IYF1 753 aaPredicted RBP15.8■□□□□ 0.12
PTPN18-204ENST00000420717 TIGD1Q96MW7 591 aa15.8■□□□□ 0.12
PTPN18-204ENST00000420717 FAM161BQ96MY7 647 aa15.8■□□□□ 0.12
PTPN18-204ENST00000420717 TMEM175Q9BSA9 504 aa15.8■□□□□ 0.12
PTPN18-204ENST00000420717 FGFBP2Q9BYJ0 223 aa15.8■□□□□ 0.12
PTPN18-204ENST00000420717 HCSTQ9UBK5 93 aa15.8■□□□□ 0.12
PTPN18-204ENST00000420717 LZTS1Q9Y250 596 aa15.8■□□□□ 0.12
PTPN18-204ENST00000420717 PCDHB13Q9Y5F0 798 aa15.8■□□□□ 0.12
PTPN18-204ENST00000420717 MYO9BQ13459 2157 aa15.8■□□□□ 0.12
PTPN18-204ENST00000420717 A0A0B4J269 797 aa15.79■□□□□ 0.12
PTPN18-204ENST00000420717 CLDN3O15551 220 aa15.79■□□□□ 0.12
PTPN18-204ENST00000420717 B4GALT3O60512 393 aa15.79■□□□□ 0.12
PTPN18-204ENST00000420717 SLC34A2O95436 690 aa15.79■□□□□ 0.12
PTPN18-204ENST00000420717 LIG4P49917 911 aa15.79■□□□□ 0.12
PTPN18-204ENST00000420717 AFF1P51825 1210 aaKnown RBP15.79■□□□□ 0.12
PTPN18-204ENST00000420717 PLCB3Q01970 1234 aa15.79■□□□□ 0.12
PTPN18-204ENST00000420717 NAB2Q15742 525 aa15.79■□□□□ 0.12
PTPN18-204ENST00000420717 ZC2HC1CQ53FD0 456 aaPredicted RBP15.79■□□□□ 0.12
PTPN18-204ENST00000420717 KANK3Q6NY19 840 aa15.79■□□□□ 0.12
PTPN18-204ENST00000420717 ALKAL1Q6UXT8 129 aa15.79■□□□□ 0.12
PTPN18-204ENST00000420717 STXBP4Q6ZWJ1 553 aa15.79■□□□□ 0.12
PTPN18-204ENST00000420717 SLC39A11Q8N1S5 342 aa15.79■□□□□ 0.12
PTPN18-204ENST00000420717 GDPD5Q8WTR4 605 aa15.79■□□□□ 0.12
PTPN18-204ENST00000420717 MYLIPQ8WY64 445 aa15.79■□□□□ 0.12
PTPN18-204ENST00000420717 ZFP42Q96MM3 310 aa15.79■□□□□ 0.12
PTPN18-204ENST00000420717 ZNF558Q96NG5 402 aa15.79■□□□□ 0.12
PTPN18-204ENST00000420717 GAD1Q99259 594 aa15.79■□□□□ 0.12
PTPN18-204ENST00000420717 GAS2L1Q99501 681 aaPredicted RBP15.79■□□□□ 0.12
PTPN18-204ENST00000420717 HAPLN2Q9GZV7 340 aa15.79■□□□□ 0.12
PTPN18-204ENST00000420717 SNTG2Q9NY99 539 aa15.79■□□□□ 0.12
PTPN18-204ENST00000420717 EXOC7Q9UPT5 735 aa15.79■□□□□ 0.12
PTPN18-204ENST00000420717 PCDHB12Q9Y5F1 795 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms