RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 LACTBP83111 547 aaPredicted RBP14.54□□□□□ -0.08
TMEM50B-201ENST00000420455 MBTD1Q05BQ5 628 aa14.54□□□□□ -0.08
TMEM50B-201ENST00000420455 MCL1Q07820 350 aa14.54□□□□□ -0.08
TMEM50B-201ENST00000420455 OLIG1Q8TAK6 271 aa14.54□□□□□ -0.08
TMEM50B-201ENST00000420455 VTI1AQ96AJ9 217 aa14.54□□□□□ -0.08
TMEM50B-201ENST00000420455 BZW2Q9Y6E2 419 aaKnown RBP14.54□□□□□ -0.08
TMEM50B-201ENST00000420455 DUSP10Q9Y6W6 482 aa14.54□□□□□ -0.08
TMEM50B-201ENST00000420455 GOLGA8IPA6NC78 632 aa14.53□□□□□ -0.08
TMEM50B-201ENST00000420455 ZNF233A6NK53 670 aa14.53□□□□□ -0.08
TMEM50B-201ENST00000420455 GOLGA8JA6NMD2 632 aa14.53□□□□□ -0.08
TMEM50B-201ENST00000420455 HOXC8P31273 242 aa14.53□□□□□ -0.08
TMEM50B-201ENST00000420455 GPC3P51654 580 aa14.53□□□□□ -0.08
TMEM50B-201ENST00000420455 ERCC6LQ2NKX8 1250 aa14.53□□□□□ -0.08
TMEM50B-201ENST00000420455 CYP4F22Q6NT55 531 aa14.53□□□□□ -0.08
TMEM50B-201ENST00000420455 TARS2Q9BW92 718 aaKnown RBP14.53□□□□□ -0.08
TMEM50B-201ENST00000420455 CARD6Q9BX69 1037 aa14.53□□□□□ -0.08
TMEM50B-201ENST00000420455 MRPL4Q9BYD3 311 aaKnown RBP14.53□□□□□ -0.08
TMEM50B-201ENST00000420455 MYO1AQ9UBC5 1043 aa14.53□□□□□ -0.08
TMEM50B-201ENST00000420455 AGO2Q9UKV8 859 aaKnown RBP14.53□□□□□ -0.08
TMEM50B-201ENST00000420455 MBLAC1A4D2B0 266 aaPredicted RBP14.53□□□□□ -0.08
TMEM50B-201ENST00000420455 TTLL13PA6NNM8 815 aa14.53□□□□□ -0.08
TMEM50B-201ENST00000420455 ACKR2O00590 384 aa14.53□□□□□ -0.08
TMEM50B-201ENST00000420455 TOM1L1O75674 476 aa14.53□□□□□ -0.08
TMEM50B-201ENST00000420455 CYP2C19P33261 490 aa14.53□□□□□ -0.08
TMEM50B-201ENST00000420455 EIF4A3P38919 411 aaKnown RBP14.53□□□□□ -0.08
TMEM50B-201ENST00000420455 FCGRTP55899 365 aa14.53□□□□□ -0.08
TMEM50B-201ENST00000420455 AMHR2Q16671 573 aa14.53□□□□□ -0.08
TMEM50B-201ENST00000420455 SLC9C1Q4G0N8 1177 aa14.53□□□□□ -0.08
TMEM50B-201ENST00000420455 PHLDB3Q6NSJ2 640 aa14.53□□□□□ -0.08
TMEM50B-201ENST00000420455 USP37Q86T82 979 aa14.53□□□□□ -0.08
TMEM50B-201ENST00000420455 ZBTB8OSQ8IWT0 167 aa14.53□□□□□ -0.08
TMEM50B-201ENST00000420455 RNF149Q8NC42 400 aa14.53□□□□□ -0.08
TMEM50B-201ENST00000420455 SYT11Q9BT88 431 aa14.53□□□□□ -0.08
TMEM50B-201ENST00000420455 SUGCTQ9HAC7 445 aa14.53□□□□□ -0.08
TMEM50B-201ENST00000420455 CNTNAP2Q9UHC6 1331 aa14.53□□□□□ -0.08
TMEM50B-201ENST00000420455 EVPLQ92817 2033 aa14.53□□□□□ -0.08
TMEM50B-201ENST00000420455 RRN3P2A6NIE6 340 aa14.52□□□□□ -0.08
TMEM50B-201ENST00000420455 CYBAP13498 195 aa14.52□□□□□ -0.08
TMEM50B-201ENST00000420455 KIF11P52732 1056 aa14.52□□□□□ -0.08
TMEM50B-201ENST00000420455 AMPD2Q01433 879 aa14.52□□□□□ -0.08
TMEM50B-201ENST00000420455 GRIK4Q16099 956 aa14.52□□□□□ -0.08
TMEM50B-201ENST00000420455 KRT39Q6A163 491 aa14.52□□□□□ -0.08
TMEM50B-201ENST00000420455 TLK2Q86UE8 772 aa14.52□□□□□ -0.08
TMEM50B-201ENST00000420455 FMNL3Q8IVF7 1028 aa14.52□□□□□ -0.08
TMEM50B-201ENST00000420455 TRPV1Q8NER1 839 aa14.52□□□□□ -0.08
TMEM50B-201ENST00000420455 BICD1Q96G01 975 aa14.52□□□□□ -0.08
TMEM50B-201ENST00000420455 CCDC42Q96M95 316 aa14.52□□□□□ -0.08
TMEM50B-201ENST00000420455 HAUS4Q9H6D7 363 aa14.52□□□□□ -0.08
TMEM50B-201ENST00000420455 ANK1P16157 1881 aa14.52□□□□□ -0.08
TMEM50B-201ENST00000420455 F8VZ95 297 aa14.52□□□□□ -0.08
TMEM50B-201ENST00000420455 PJA2O43164 708 aa14.52□□□□□ -0.08
TMEM50B-201ENST00000420455 CYP2B6P20813 491 aa14.52□□□□□ -0.08
TMEM50B-201ENST00000420455 CLCN3P51790 818 aa14.52□□□□□ -0.08
TMEM50B-201ENST00000420455 NLRP11P59045 1033 aaKnown RBP14.52□□□□□ -0.08
TMEM50B-201ENST00000420455 SMYD5Q6GMV2 418 aa14.52□□□□□ -0.08
TMEM50B-201ENST00000420455 RHPN2Q8IUC4 686 aa14.52□□□□□ -0.08
TMEM50B-201ENST00000420455 ZBTB45Q96K62 511 aaPredicted RBP14.52□□□□□ -0.08
TMEM50B-201ENST00000420455 CREBZFQ9NS37 354 aa14.52□□□□□ -0.08
TMEM50B-201ENST00000420455 PRKCBP05771 671 aa14.52□□□□□ -0.09
TMEM50B-201ENST00000420455 GCLMP48507 274 aa14.52□□□□□ -0.09
TMEM50B-201ENST00000420455 POU5F1Q01860 360 aaKnown RBP14.52□□□□□ -0.09
TMEM50B-201ENST00000420455 MAPK6Q16659 721 aa14.52□□□□□ -0.09
TMEM50B-201ENST00000420455 ZNF516Q92618 1163 aa14.52□□□□□ -0.09
TMEM50B-201ENST00000420455 FAM213AQ9BRX8 229 aa14.52□□□□□ -0.09
TMEM50B-201ENST00000420455 UPF3AQ9H1J1 476 aaKnown RBP14.52□□□□□ -0.09
TMEM50B-201ENST00000420455 DYNC1LI2O43237 492 aaPredicted RBP14.51□□□□□ -0.09
TMEM50B-201ENST00000420455 IQCF3P0C7M6 154 aa14.51□□□□□ -0.09
TMEM50B-201ENST00000420455 CPT1AP50416 773 aa14.51□□□□□ -0.09
TMEM50B-201ENST00000420455 MXI1P50539 228 aa14.51□□□□□ -0.09
TMEM50B-201ENST00000420455 VAV2P52735 878 aa14.51□□□□□ -0.09
TMEM50B-201ENST00000420455 CETN1Q12798 172 aa14.51□□□□□ -0.09
TMEM50B-201ENST00000420455 ASIC2Q16515 512 aa14.51□□□□□ -0.09
TMEM50B-201ENST00000420455 GJB7Q6PEY0 223 aa14.51□□□□□ -0.09
TMEM50B-201ENST00000420455 GUCA1BQ9UMX6 200 aa14.51□□□□□ -0.09
TMEM50B-201ENST00000420455 NRCAMQ92823 1304 aa14.51□□□□□ -0.09
TMEM50B-201ENST00000420455 GFPT2O94808 682 aa14.51□□□□□ -0.09
TMEM50B-201ENST00000420455 C4BPAP04003 597 aaKnown RBP14.51□□□□□ -0.09
TMEM50B-201ENST00000420455 WNT7BP56706 349 aa14.51□□□□□ -0.09
TMEM50B-201ENST00000420455 PPFIA1Q13136 1202 aa14.51□□□□□ -0.09
TMEM50B-201ENST00000420455 ZBTB10Q96DT7 871 aa14.51□□□□□ -0.09
TMEM50B-201ENST00000420455 MINDY3Q9H8M7 445 aa14.51□□□□□ -0.09
TMEM50B-201ENST00000420455 DNAJC12Q9UKB3 198 aa14.51□□□□□ -0.09
TMEM50B-201ENST00000420455 TNFSF13BQ9Y275 285 aa14.51□□□□□ -0.09
TMEM50B-201ENST00000420455 ZC3H11AO75152 810 aaKnown RBP eCLIP14.5□□□□□ -0.091e-7■■■□□ 17.7
TMEM50B-201ENST00000420455 GJB1P08034 283 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 SRGAP2CP0DJJ0 459 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 SOX5P35711 763 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 SLC18A3Q16572 532 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 ZNF410Q86VK4 478 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 KIAA0319LQ8IZA0 1049 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 SEMA4DQ92854 862 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 MSTO1Q9BUK6 570 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 ARHGAP39Q9C0H5 1083 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 RRP9O43818 475 aaKnown RBP14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 DUSP11O75319 330 aaKnown RBP14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 FERP16591 822 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 STAT1P42224 750 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 PSMC4P43686 418 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 CAP1Q01518 475 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 RAPGEF1Q13905 1077 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms