RNA–Protein interactions for RNA: ENST00000419964.1

EPHA4-205, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 552 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-205ENST00000419964 USP49Q70CQ1 688 aa8.05□□□□□ -1.12
EPHA4-205ENST00000419964 FAM114A1Q8IWE2 563 aa8.05□□□□□ -1.12
EPHA4-205ENST00000419964 MFSD2AQ8NA29 543 aa8.05□□□□□ -1.12
EPHA4-205ENST00000419964 GIMAP7Q8NHV1 300 aa8.05□□□□□ -1.12
EPHA4-205ENST00000419964 ERCC4Q92889 916 aaPredicted RBP8.05□□□□□ -1.12
EPHA4-205ENST00000419964 SHDQ96IW2 340 aa8.05□□□□□ -1.12
EPHA4-205ENST00000419964 FAM20AQ96MK3 541 aa8.05□□□□□ -1.12
EPHA4-205ENST00000419964 C7orf25Q9BPX7 421 aa8.05□□□□□ -1.12
EPHA4-205ENST00000419964 ANO3Q9BYT9 981 aa8.05□□□□□ -1.12
EPHA4-205ENST00000419964 CPVLQ9H3G5 476 aa8.05□□□□□ -1.12
EPHA4-205ENST00000419964 TPSG1Q9NRR2 321 aa8.05□□□□□ -1.12
EPHA4-205ENST00000419964 IFNKQ9P0W0 207 aa8.05□□□□□ -1.12
EPHA4-205ENST00000419964 PCDHA12Q9UN75 941 aa8.05□□□□□ -1.12
EPHA4-205ENST00000419964 NFE2L3Q9Y4A8 694 aa8.05□□□□□ -1.12
EPHA4-205ENST00000419964 WDR46O15213 610 aaKnown RBP8.04□□□□□ -1.12
EPHA4-205ENST00000419964 AP5Z1O43299 807 aa8.04□□□□□ -1.12
EPHA4-205ENST00000419964 STK10O94804 968 aaKnown RBP8.04□□□□□ -1.12
EPHA4-205ENST00000419964 RHOBTB3O94955 611 aa8.04□□□□□ -1.12
EPHA4-205ENST00000419964 CYP3A4P08684 503 aa8.04□□□□□ -1.12
EPHA4-205ENST00000419964 MUTP22033 750 aa8.04□□□□□ -1.12
EPHA4-205ENST00000419964 GTF2F1P35269 517 aaKnown RBP eCLIP8.04□□□□□ -1.12
EPHA4-205ENST00000419964 SLC16A2P36021 539 aa8.04□□□□□ -1.12
EPHA4-205ENST00000419964 SREBF1P36956 1147 aa8.04□□□□□ -1.12
EPHA4-205ENST00000419964 TECP42680 631 aa8.04□□□□□ -1.12
EPHA4-205ENST00000419964 TXKP42681 527 aa8.04□□□□□ -1.12
EPHA4-205ENST00000419964 PAK1Q13153 545 aa8.04□□□□□ -1.12
EPHA4-205ENST00000419964 NOLC1Q14978 699 aaKnown RBP eCLIP8.04□□□□□ -1.12
EPHA4-205ENST00000419964 KARSQ15046 597 aaKnown RBP8.04□□□□□ -1.12
EPHA4-205ENST00000419964 IL17AQ16552 155 aa8.04□□□□□ -1.12
EPHA4-205ENST00000419964 Q4G0T1 1027 aa8.04□□□□□ -1.12
EPHA4-205ENST00000419964 PRAMEF13Q5VWM6 474 aa8.04□□□□□ -1.12
EPHA4-205ENST00000419964 CDCP2Q5VXM1 449 aa8.04□□□□□ -1.12
EPHA4-205ENST00000419964 OVOS1Q6IE37 1185 aa8.04□□□□□ -1.12
EPHA4-205ENST00000419964 FOXR2Q6PJQ5 311 aa8.04□□□□□ -1.12
EPHA4-205ENST00000419964 PRR23CQ6ZRP0 262 aa8.04□□□□□ -1.12
EPHA4-205ENST00000419964 ARMCX6Q7L4S7 300 aa8.04□□□□□ -1.12
EPHA4-205ENST00000419964 UBE3DQ7Z6J8 389 aa8.04□□□□□ -1.12
EPHA4-205ENST00000419964 SIAH1Q8IUQ4 282 aa8.04□□□□□ -1.12
EPHA4-205ENST00000419964 LRRC8AQ8IWT6 810 aa8.04□□□□□ -1.12
EPHA4-205ENST00000419964 PRPF38AQ8NAV1 312 aaKnown RBP8.04□□□□□ -1.12
EPHA4-205ENST00000419964 KIAA1524Q8TCG1 905 aa8.04□□□□□ -1.12
EPHA4-205ENST00000419964 ATG4CQ96DT6 458 aa8.04□□□□□ -1.12
EPHA4-205ENST00000419964 DHTKD1Q96HY7 919 aaPredicted RBP8.04□□□□□ -1.12
EPHA4-205ENST00000419964 MBOAT7Q96N66 472 aa8.04□□□□□ -1.12
EPHA4-205ENST00000419964 FEZ1Q99689 392 aa8.04□□□□□ -1.12
EPHA4-205ENST00000419964 TM9SF2Q99805 663 aa8.04□□□□□ -1.12
EPHA4-205ENST00000419964 XPO4Q9C0E2 1151 aaKnown RBP8.04□□□□□ -1.12
EPHA4-205ENST00000419964 TMEM60Q9H2L4 133 aa8.04□□□□□ -1.12
EPHA4-205ENST00000419964 RANBP17Q9H2T7 1088 aaKnown RBP8.04□□□□□ -1.12
EPHA4-205ENST00000419964 TTC12Q9H892 705 aaPredicted RBP8.04□□□□□ -1.12
EPHA4-205ENST00000419964 SPTLC3Q9NUV7 552 aa8.04□□□□□ -1.12
EPHA4-205ENST00000419964 EXOC1Q9NV70 894 aa8.04□□□□□ -1.12
EPHA4-205ENST00000419964 FANCLQ9NW38 375 aa8.04□□□□□ -1.12
EPHA4-205ENST00000419964 PCDHAC2Q9Y5I4 1007 aa8.04□□□□□ -1.12
EPHA4-205ENST00000419964 A0A087X0B3 334 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 UPK3BL1B0FP48 263 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 CHURC1-FNTBB4DL54 471 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 UPK3BL2E5RIL1 263 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 GCOM1H8Y6P7 765 aaPredicted RBP8.03□□□□□ -1.12
EPHA4-205ENST00000419964 MSTNO14793 375 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 FOXN1O15353 648 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 DYNC1LI2O43237 492 aaPredicted RBP8.03□□□□□ -1.12
EPHA4-205ENST00000419964 DNAJA2O60884 412 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 PPP1R11O60927 126 aaPredicted RBP8.03□□□□□ -1.12
EPHA4-205ENST00000419964 POLR2MP0CAP2 368 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 RAG1P15918 1043 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 ZNF18P17022 549 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 PTGS1P23219 599 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 CIITAP33076 1130 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 SETQ01105 290 aaPredicted RBP8.03□□□□□ -1.12
EPHA4-205ENST00000419964 CUL4BQ13620 913 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 TRIM14Q14142 442 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 RASA3Q14644 834 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 R3HDM1Q15032 1099 aaKnown RBP8.03□□□□□ -1.12
EPHA4-205ENST00000419964 SUPT20HL1Q3ZLR7 823 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 ARSHQ5FYA8 562 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 DNTTIP2Q5QJE6 756 aaKnown RBP8.03□□□□□ -1.12
EPHA4-205ENST00000419964 HYIQ5T013 277 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 ISM2Q6H9L7 571 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 SEZ6L2Q6UXD5 910 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 NLRC3Q7RTR2 1065 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 KRT26Q7Z3Y9 468 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 FILIP1Q7Z7B0 1213 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 LSRQ86X29 649 aaPredicted RBP8.03□□□□□ -1.12
EPHA4-205ENST00000419964 GPC2Q8N158 579 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 GIMAP8Q8ND71 665 aaPredicted RBP8.03□□□□□ -1.12
EPHA4-205ENST00000419964 UBXN4Q92575 508 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 LARP4BQ92615 738 aaKnown RBP8.03□□□□□ -1.12
EPHA4-205ENST00000419964 IQCDQ96DY2 449 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 ZNF341Q9BYN7 854 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 TMEM39BQ9GZU3 492 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 KIAA1683Q9H0B3 1180 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 DEFB129Q9H1M3 183 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 C7orf69Q9H7B7 122 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 KCND1Q9NSA2 647 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 TMEM260Q9NX78 707 aa8.03□□□□□ -1.12
EPHA4-205ENST00000419964 CTDP1Q9Y5B0 961 aaPredicted RBP8.03□□□□□ -1.12
EPHA4-205ENST00000419964 COL4A5P29400 1685 aa8.02□□□□□ -1.13
EPHA4-205ENST00000419964 A0A1W2PRG0 241 aa8.02□□□□□ -1.13
EPHA4-205ENST00000419964 HMX2A2RU54 273 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms