RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 PACS2Q86VP3 889 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 FMNL3Q8IVF7 1028 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 LINC01465Q8N7H1 131 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 C7orf31Q8N865 590 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 PCSK9Q8NBP7 692 aaKnown RBP6.49□□□□□ -1.37
HMGB3-202ENST00000419110 TRPV1Q8NER1 839 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 PXYLP1Q8TE99 480 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 TMEM174Q8WUU8 243 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 PRPF31Q8WWY3 499 aaKnown RBP6.49□□□□□ -1.37
HMGB3-202ENST00000419110 NLRP7Q8WX94 980 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 SLC35C1Q96A29 364 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 PRIMPOLQ96LW4 560 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 PANX2Q96RD6 677 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 NTPCRQ9BSD7 190 aaKnown RBP6.49□□□□□ -1.37
HMGB3-202ENST00000419110 NAA15Q9BXJ9 866 aaKnown RBP6.49□□□□□ -1.37
HMGB3-202ENST00000419110 INO80BQ9C086 356 aaPredicted RBP6.49□□□□□ -1.37
HMGB3-202ENST00000419110 CCDC113Q9H0I3 377 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 FAM49AQ9H0Q0 323 aaPredicted RBP6.49□□□□□ -1.37
HMGB3-202ENST00000419110 KCNF1Q9H3M0 494 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 MMRN2Q9H8L6 949 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 DMAC2Q9NW81 257 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 ZNHIT6Q9NWK9 470 aaKnown RBP6.49□□□□□ -1.37
HMGB3-202ENST00000419110 WBP1LQ9NX94 342 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 CEP72Q9P209 647 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 DDX20Q9UHI6 824 aaKnown RBP6.49□□□□□ -1.37
HMGB3-202ENST00000419110 SMIM35A0A1B0GVV1 85 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 TISP43B9A030 160 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 HAS3O00219 553 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 P4HA2O15460 535 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 EXTL3O43909 919 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 ADAMTS4O75173 837 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 TOM1L1O75674 476 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 TRIM49P0CI25 452 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 TRIM49CP0CI26 452 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 SRGAP2CP0DJJ0 459 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 SKILP12757 684 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 KLRC1P26715 233 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 CASP14P31944 242 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 FMO5P49326 533 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 GPC3P51654 580 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 VAMP7P51809 220 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 PTENP60484 403 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 ZBED6P86452 979 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 CCZ1BP86790 482 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 CCZ1P86791 482 aaPredicted RBP6.48□□□□□ -1.37
HMGB3-202ENST00000419110 CDC42EP1Q00587 391 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 MBTD1Q05BQ5 628 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 POU5F1BQ06416 359 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 CYP24A1Q07973 514 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 CACNB2Q08289 660 aaPredicted RBP6.48□□□□□ -1.37
HMGB3-202ENST00000419110 KCNH2Q12809 1159 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 LRMPQ12912 555 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 DRP2Q13474 957 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 PRPF4BQ13523 1007 aaKnown RBP6.48□□□□□ -1.37
HMGB3-202ENST00000419110 PCBP1Q15365 356 aaKnown RBP eCLIP6.48□□□□□ -1.37
HMGB3-202ENST00000419110 PTPN21Q16825 1174 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 DCAF4L1Q3SXM0 396 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 FAM47CQ5HY64 1035 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 GNASQ5JWF2 1037 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 MAP3K21Q5TCX8 1036 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 ATF7IP2Q5U623 682 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 SLC39A4Q6P5W5 647 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 MPZL3Q6UWV2 235 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 TAS1R3Q7RTX0 852 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 RNF180Q86T96 592 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 RSPH3Q86UC2 560 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 BRSK2Q8IWQ3 736 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 LRRC8AQ8IWT6 810 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 TC2NQ8N9U0 490 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 CACTINQ8WUQ7 758 aaKnown RBP6.48□□□□□ -1.37
HMGB3-202ENST00000419110 ZNF296Q8WUU4 475 aaPredicted RBP6.48□□□□□ -1.37
HMGB3-202ENST00000419110 SAAL1Q96ER3 474 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 FNBP1Q96RU3 617 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 BAG1Q99933 345 aaPredicted RBP6.48□□□□□ -1.37
HMGB3-202ENST00000419110 ADPGKQ9BRR6 497 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 EDEM3Q9BZQ6 932 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 TTYH3Q9C0H2 523 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 NUCKS1Q9H1E3 243 aaKnown RBP6.48□□□□□ -1.37
HMGB3-202ENST00000419110 RNPEPQ9H4A4 650 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 PCIF1Q9H4Z3 704 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 FAM207AQ9NSI2 230 aaPredicted RBP6.48□□□□□ -1.37
HMGB3-202ENST00000419110 ABHD10Q9NUJ1 306 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 RBAKQ9NYW8 714 aaPredicted RBP6.48□□□□□ -1.37
HMGB3-202ENST00000419110 TSKSQ9UJT2 592 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 AGO2Q9UKV8 859 aaKnown RBP6.48□□□□□ -1.37
HMGB3-202ENST00000419110 SIK3Q9Y2K2 1263 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 LUC7L2Q9Y383 392 aaKnown RBP6.48□□□□□ -1.37
HMGB3-202ENST00000419110 TRIM17Q9Y577 477 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 MICAL3Q7RTP6 2002 aa6.48□□□□□ -1.37
HMGB3-202ENST00000419110 MBLAC1A4D2B0 266 aaPredicted RBP6.47□□□□□ -1.37
HMGB3-202ENST00000419110 GOLGA8IPA6NC78 632 aa6.47□□□□□ -1.37
HMGB3-202ENST00000419110 MYADML2A6NDP7 307 aa6.47□□□□□ -1.37
HMGB3-202ENST00000419110 GOLGA6L9A6NEM1 432 aa6.47□□□□□ -1.37
HMGB3-202ENST00000419110 ZNF233A6NK53 670 aa6.47□□□□□ -1.37
HMGB3-202ENST00000419110 GOLGA8JA6NMD2 632 aa6.47□□□□□ -1.37
HMGB3-202ENST00000419110 KBTBD13C9JR72 458 aa6.47□□□□□ -1.37
HMGB3-202ENST00000419110 ANKRD63C9JTQ0 380 aa6.47□□□□□ -1.37
HMGB3-202ENST00000419110 ACKR2O00590 384 aa6.47□□□□□ -1.37
HMGB3-202ENST00000419110 OGTO15294 1046 aa6.47□□□□□ -1.37
HMGB3-202ENST00000419110 CLDN3O15551 220 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms