RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 NLRP7Q8WX94 980 aa22.6■■□□□ 1.21
CASC3-203ENST00000418132 PRIMPOLQ96LW4 560 aa22.6■■□□□ 1.21
CASC3-203ENST00000418132 PPP1R16BQ96T49 567 aa22.6■■□□□ 1.21
CASC3-203ENST00000418132 ADAMTS10Q9H324 1103 aa22.6■■□□□ 1.21
CASC3-203ENST00000418132 PTPRHQ9HD43 1115 aa22.6■■□□□ 1.21
CASC3-203ENST00000418132 TRIP12Q14669 1992 aaPredicted RBP22.6■■□□□ 1.21
CASC3-203ENST00000418132 SLC9A1P19634 815 aa22.59■■□□□ 1.21
CASC3-203ENST00000418132 PON1P27169 355 aa22.59■■□□□ 1.21
CASC3-203ENST00000418132 GRK4P32298 578 aa22.59■■□□□ 1.21
CASC3-203ENST00000418132 TERF1P54274 439 aa22.59■■□□□ 1.21
CASC3-203ENST00000418132 MCL1Q07820 350 aa22.59■■□□□ 1.21
CASC3-203ENST00000418132 PPP3CAQ08209 521 aa22.59■■□□□ 1.21
CASC3-203ENST00000418132 KCNA10Q16322 511 aa22.59■■□□□ 1.21
CASC3-203ENST00000418132 ATF7IP2Q5U623 682 aa22.59■■□□□ 1.21
CASC3-203ENST00000418132 SRGAP1Q7Z6B7 1085 aa22.59■■□□□ 1.21
CASC3-203ENST00000418132 USP37Q86T82 979 aa22.59■■□□□ 1.21
CASC3-203ENST00000418132 ZNF397Q8NF99 534 aaPredicted RBP22.59■■□□□ 1.21
CASC3-203ENST00000418132 BEGAINQ9BUH8 593 aa22.59■■□□□ 1.21
CASC3-203ENST00000418132 FAM49AQ9H0Q0 323 aaPredicted RBP22.59■■□□□ 1.21
CASC3-203ENST00000418132 GCNT4Q9P109 453 aa22.59■■□□□ 1.21
CASC3-203ENST00000418132 PMM2O15305 246 aa22.59■■□□□ 1.21
CASC3-203ENST00000418132 P4HA2O15460 535 aa22.59■■□□□ 1.21
CASC3-203ENST00000418132 ARHGAP6O43182 974 aa22.59■■□□□ 1.21
CASC3-203ENST00000418132 B4GALT5O43286 388 aa22.59■■□□□ 1.21
CASC3-203ENST00000418132 N4BP1O75113 896 aaKnown RBP22.59■■□□□ 1.21
CASC3-203ENST00000418132 ASGR1P07306 291 aa22.59■■□□□ 1.21
CASC3-203ENST00000418132 MATR3P43243 847 aaKnown RBP eCLIP22.59■■□□□ 1.21
CASC3-203ENST00000418132 ZNF200P98182 395 aaPredicted RBP22.59■■□□□ 1.21
CASC3-203ENST00000418132 NBPF20Q3BBV1 942 aa22.59■■□□□ 1.21
CASC3-203ENST00000418132 GANQ9H2C0 597 aa22.59■■□□□ 1.21
CASC3-203ENST00000418132 CEP72Q9P209 647 aa22.59■■□□□ 1.21
CASC3-203ENST00000418132 TSKSQ9UJT2 592 aa22.59■■□□□ 1.21
CASC3-203ENST00000418132 TNFSF13BQ9Y275 285 aa22.59■■□□□ 1.21
CASC3-203ENST00000418132 FAM189A1O60320 539 aa22.58■■□□□ 1.21
CASC3-203ENST00000418132 GPR32O75388 356 aa22.58■■□□□ 1.21
CASC3-203ENST00000418132 HSPA6P17066 643 aa22.58■■□□□ 1.21
CASC3-203ENST00000418132 ACOT2P49753 483 aa22.58■■□□□ 1.21
CASC3-203ENST00000418132 MPZL3Q6UWV2 235 aa22.58■■□□□ 1.21
CASC3-203ENST00000418132 PCSK9Q8NBP7 692 aaKnown RBP22.58■■□□□ 1.21
CASC3-203ENST00000418132 BAP1Q92560 729 aa22.58■■□□□ 1.21
CASC3-203ENST00000418132 TCHPQ9BT92 498 aa22.58■■□□□ 1.21
CASC3-203ENST00000418132 GTF2IRD1Q9UHL9 959 aa22.58■■□□□ 1.21
CASC3-203ENST00000418132 TRIM17Q9Y577 477 aa22.58■■□□□ 1.21
CASC3-203ENST00000418132 CNTNAP2Q9UHC6 1331 aa22.58■■□□□ 1.21
CASC3-203ENST00000418132 LRRIQ3A6PVS8 624 aaPredicted RBP22.58■■□□□ 1.2
CASC3-203ENST00000418132 MYL7Q01449 175 aa22.58■■□□□ 1.2
CASC3-203ENST00000418132 PSMD6Q15008 389 aa22.58■■□□□ 1.2
CASC3-203ENST00000418132 KIZQ2M2Z5 673 aa22.58■■□□□ 1.2
CASC3-203ENST00000418132 CCDC127Q96BQ5 260 aa22.58■■□□□ 1.2
CASC3-203ENST00000418132 SCLT1Q96NL6 688 aa22.58■■□□□ 1.2
CASC3-203ENST00000418132 PTCH2Q9Y6C5 1203 aa22.58■■□□□ 1.2
CASC3-203ENST00000418132 CSDE1O75534 798 aaKnown RBP22.57■■□□□ 1.2
CASC3-203ENST00000418132 APBA1Q02410 837 aa22.57■■□□□ 1.2
CASC3-203ENST00000418132 MEA1Q16626 185 aa22.57■■□□□ 1.2
CASC3-203ENST00000418132 KLHDC7AQ5VTJ3 777 aa22.57■■□□□ 1.2
CASC3-203ENST00000418132 DNAJB3Q8WWF6 145 aa22.57■■□□□ 1.2
CASC3-203ENST00000418132 HMX1Q9NP08 348 aaPredicted RBP22.57■■□□□ 1.2
CASC3-203ENST00000418132 SIX2Q9NPC8 291 aa22.57■■□□□ 1.2
CASC3-203ENST00000418132 FBXL5Q9UKA1 691 aa22.57■■□□□ 1.2
CASC3-203ENST00000418132 OGTO15294 1046 aa22.56■■□□□ 1.2
CASC3-203ENST00000418132 ACTN1P12814 892 aa22.56■■□□□ 1.2
CASC3-203ENST00000418132 HNRNPH3P31942 346 aaKnown RBP22.56■■□□□ 1.2
CASC3-203ENST00000418132 GTF2H1P32780 548 aa22.56■■□□□ 1.2
CASC3-203ENST00000418132 GCLMP48507 274 aa22.56■■□□□ 1.2
CASC3-203ENST00000418132 CLDN10P78369 228 aa22.56■■□□□ 1.2
CASC3-203ENST00000418132 TSR1Q2NL82 804 aaKnown RBP22.56■■□□□ 1.2
CASC3-203ENST00000418132 ZBTB41Q5SVQ8 909 aa22.56■■□□□ 1.2
CASC3-203ENST00000418132 TRIM65Q6PJ69 517 aa22.56■■□□□ 1.2
CASC3-203ENST00000418132 CACNA2D4Q7Z3S7 1137 aa22.56■■□□□ 1.2
CASC3-203ENST00000418132 RNF180Q86T96 592 aa22.56■■□□□ 1.2
CASC3-203ENST00000418132 SESTD1Q86VW0 696 aa22.56■■□□□ 1.2
CASC3-203ENST00000418132 ZNF710Q8N1W2 664 aa22.56■■□□□ 1.2
CASC3-203ENST00000418132 NME8Q8N427 588 aa22.56■■□□□ 1.2
CASC3-203ENST00000418132 GCOM2Q9BZD3 368 aaPredicted RBP22.56■■□□□ 1.2
CASC3-203ENST00000418132 TMEM117Q9H0C3 514 aa22.56■■□□□ 1.2
CASC3-203ENST00000418132 PLAGL2Q9UPG8 496 aa22.56■■□□□ 1.2
CASC3-203ENST00000418132 POLR2FP61218 127 aaKnown RBP22.56■■□□□ 1.2
CASC3-203ENST00000418132 TMEM62Q0P6H9 643 aa22.56■■□□□ 1.2
CASC3-203ENST00000418132 EEF1DP3Q658K8 133 aa22.56■■□□□ 1.2
CASC3-203ENST00000418132 TAF2Q6P1X5 1199 aa22.56■■□□□ 1.2
CASC3-203ENST00000418132 WDR59Q6PJI9 974 aa22.56■■□□□ 1.2
CASC3-203ENST00000418132 ZBTB33Q86T24 672 aa22.56■■□□□ 1.2
CASC3-203ENST00000418132 TMTC1Q8IUR5 882 aa22.56■■□□□ 1.2
CASC3-203ENST00000418132 RBAKQ9NYW8 714 aaPredicted RBP22.56■■□□□ 1.2
CASC3-203ENST00000418132 UCHL3P15374 230 aa22.55■■□□□ 1.2
CASC3-203ENST00000418132 MXI1P50539 228 aa22.55■■□□□ 1.2
CASC3-203ENST00000418132 CETN1Q12798 172 aa22.55■■□□□ 1.2
CASC3-203ENST00000418132 ZNF568Q3ZCX4 644 aa22.55■■□□□ 1.2
CASC3-203ENST00000418132 LHX8Q68G74 356 aa22.55■■□□□ 1.2
CASC3-203ENST00000418132 LMO3Q8TAP4 145 aa22.55■■□□□ 1.2
CASC3-203ENST00000418132 POP1Q99575 1024 aaKnown RBP22.55■■□□□ 1.2
CASC3-203ENST00000418132 TMEM8AQ9HCN3 771 aa22.55■■□□□ 1.2
CASC3-203ENST00000418132 KCND1Q9NSA2 647 aa22.55■■□□□ 1.2
CASC3-203ENST00000418132 HARSP12081 509 aaKnown RBP22.54■■□□□ 1.2
CASC3-203ENST00000418132 ARF4P18085 180 aaPredicted RBP22.54■■□□□ 1.2
CASC3-203ENST00000418132 TMEM132AQ24JP5 1023 aa22.54■■□□□ 1.2
CASC3-203ENST00000418132 EPC2Q52LR7 807 aa22.54■■□□□ 1.2
CASC3-203ENST00000418132 PDXDC1Q6P996 788 aa22.54■■□□□ 1.2
CASC3-203ENST00000418132 CYP26C1Q6V0L0 522 aa22.54■■□□□ 1.2
CASC3-203ENST00000418132 RRAGAQ7L523 313 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms