RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 INTS4Q96HW7 963 aaKnown RBP7.04□□□□□ -1.28
NIFKP3-201ENST00000417799 CD244Q9BZW8 370 aa7.04□□□□□ -1.28
NIFKP3-201ENST00000417799 SLC6A17Q9H1V8 727 aa7.04□□□□□ -1.28
NIFKP3-201ENST00000417799 DDX56Q9NY93 547 aaKnown RBP7.04□□□□□ -1.28
NIFKP3-201ENST00000417799 MYOTQ9UBF9 498 aa7.04□□□□□ -1.28
NIFKP3-201ENST00000417799 DBNLQ9UJU6 430 aaKnown RBP7.04□□□□□ -1.28
NIFKP3-201ENST00000417799 PCDHB4Q9Y5E5 795 aa7.04□□□□□ -1.28
NIFKP3-201ENST00000417799 TAF1P21675 1872 aa7.04□□□□□ -1.28
NIFKP3-201ENST00000417799 ZNF804BA4D1E1 1349 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 AOX1Q06278 1338 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 TTC41PQ6P2S7 1318 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 ZNF609O15014 1411 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 NUDT19A8MXV4 375 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 ALG1L2C9J202 215 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 H7C1D1 291 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 SNAP23O00161 211 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 ERC2O15083 957 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 GPR39O43194 453 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 ZBTB48P10074 688 aaPredicted RBP7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 YBX3P16989 372 aaKnown RBP eCLIP7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 PMLP29590 882 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 ADORA1P30542 326 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 ID4P47928 161 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 LSSP48449 732 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 KPNA1P52294 538 aaPredicted RBP7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 IRF9Q00978 393 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 OCRLQ01968 901 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 RAB3GAP1Q15042 981 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 FIGNQ5HY92 759 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 CCDC158Q5M9N0 1113 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 GORABQ5T7V8 394 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 RNF219Q5W0B1 726 aaPredicted RBP7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 TSHZ3Q63HK5 1081 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 OLFM4Q6UX06 510 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 LHFPL2Q6ZUX7 228 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 KCTD1Q719H9 257 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 MILR1Q7Z6M3 343 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 KRTAP19-1Q8IUB9 90 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 RBM12BQ8IXT5 1001 aaKnown RBP7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 ECHDC1Q9NTX5 307 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 OXSMQ9NWU1 459 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 ASH2LQ9UBL3 628 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 PALD1Q9ULE6 856 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 APOBEC2Q9Y235 224 aaKnown RBP7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 ATP23Q9Y6H3 246 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 COL11A2P13942 1736 aaPredicted RBP7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 KIF13BQ9NQT8 1826 aa7.03□□□□□ -1.28
NIFKP3-201ENST00000417799 OR14I1A6ND48 311 aa7.02□□□□□ -1.29
NIFKP3-201ENST00000417799 BIN1O00499 593 aa7.02□□□□□ -1.29
NIFKP3-201ENST00000417799 CLASP2O75122 1294 aaKnown RBP7.02□□□□□ -1.29
NIFKP3-201ENST00000417799 HIP1RO75146 1068 aa7.02□□□□□ -1.29
NIFKP3-201ENST00000417799 UFL1O94874 794 aa7.02□□□□□ -1.29
NIFKP3-201ENST00000417799 ATP5JP18859 108 aa7.02□□□□□ -1.29
NIFKP3-201ENST00000417799 TMPRSS15P98073 1019 aa7.02□□□□□ -1.29
NIFKP3-201ENST00000417799 TUSC3Q13454 348 aa7.02□□□□□ -1.29
NIFKP3-201ENST00000417799 TTC39AQ5SRH9 613 aa7.02□□□□□ -1.29
NIFKP3-201ENST00000417799 TTC22Q5TAA0 569 aa7.02□□□□□ -1.29
NIFKP3-201ENST00000417799 DPP8Q6V1X1 898 aaPredicted RBP7.02□□□□□ -1.29
NIFKP3-201ENST00000417799 RPTNQ6XPR3 784 aa7.02□□□□□ -1.29
NIFKP3-201ENST00000417799 C15orf52Q6ZUT6 534 aaKnown RBP7.02□□□□□ -1.29
NIFKP3-201ENST00000417799 FERMT3Q86UX7 667 aa7.02□□□□□ -1.29
NIFKP3-201ENST00000417799 C11orf74Q86VG3 221 aa7.02□□□□□ -1.29
NIFKP3-201ENST00000417799 NOSTRINQ8IVI9 506 aa7.02□□□□□ -1.29
NIFKP3-201ENST00000417799 TRIM48Q8IWZ4 208 aa7.02□□□□□ -1.29
NIFKP3-201ENST00000417799 RTKN2Q8IZC4 609 aa7.02□□□□□ -1.29
NIFKP3-201ENST00000417799 TBC1D16Q8TBP0 767 aa7.02□□□□□ -1.29
NIFKP3-201ENST00000417799 STAG1Q8WVM7 1258 aa7.02□□□□□ -1.29
NIFKP3-201ENST00000417799 FAM84BQ96KN1 310 aaPredicted RBP7.02□□□□□ -1.29
NIFKP3-201ENST00000417799 SPTLC3Q9NUV7 552 aa7.02□□□□□ -1.29
NIFKP3-201ENST00000417799 TYW1Q9NV66 732 aaKnown RBP7.02□□□□□ -1.29
NIFKP3-201ENST00000417799 H2AFY2Q9P0M6 372 aaPredicted RBP7.02□□□□□ -1.29
NIFKP3-201ENST00000417799 POLLQ9UGP5 575 aa7.02□□□□□ -1.29
NIFKP3-201ENST00000417799 TCRBV5S2A0A599 114 aa7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 SCDO00767 359 aa7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 LTFP02788 710 aa7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 GLI1P08151 1106 aa7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 UQCRFS1P1P0C7P4 283 aa7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 KLRK1P26718 216 aa7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 PHKA1P46020 1223 aa7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 GUCY2FP51841 1108 aa7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 EPHA5P54756 1037 aa7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 TMEM62Q0P6H9 643 aa7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 SLC9A5Q14940 896 aa7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 ZNF174Q15697 407 aa7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 KCNMB1Q16558 191 aa7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 ATP13A4Q4VNC1 1196 aa7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 CCDC93Q567U6 631 aa7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 CAVIN4Q5BKX8 364 aa7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 CPZQ66K79 652 aa7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 CREB3L3Q68CJ9 461 aa7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 FSTL4Q6MZW2 842 aa7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 ZSWIM9Q86XI8 627 aa7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 SPATS2Q86XZ4 545 aaKnown RBP7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 SYT17Q9BSW7 474 aa7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 RTFDC1Q9BY42 306 aaPredicted RBP7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 EMC7Q9NPA0 242 aa7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 GNL3LQ9NVN8 582 aaKnown RBP7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 SLC5A4Q9NY91 659 aa7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 KLHL14Q9P2G3 628 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms