RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 EEF1DP3Q658K8 133 aa12.14□□□□□ -0.47
TM9SF4-203ENST00000417389 TMC7Q7Z402 723 aa12.14□□□□□ -0.47
TM9SF4-203ENST00000417389 HAUS6Q7Z4H7 955 aa12.14□□□□□ -0.47
TM9SF4-203ENST00000417389 RBM23Q86U06 439 aaKnown RBP12.14□□□□□ -0.47
TM9SF4-203ENST00000417389 SPPL3Q8TCT6 385 aa12.14□□□□□ -0.47
TM9SF4-203ENST00000417389 HLA-CQ95604 372 aa12.14□□□□□ -0.47
TM9SF4-203ENST00000417389 ZFP42Q96MM3 310 aa12.14□□□□□ -0.47
TM9SF4-203ENST00000417389 CCDC94Q9BW85 323 aaPredicted RBP12.14□□□□□ -0.47
TM9SF4-203ENST00000417389 TARS2Q9BW92 718 aaKnown RBP12.14□□□□□ -0.47
TM9SF4-203ENST00000417389 TMEM134Q9H6X4 195 aa12.14□□□□□ -0.47
TM9SF4-203ENST00000417389 NRDE2Q9H7Z3 1164 aa12.14□□□□□ -0.47
TM9SF4-203ENST00000417389 TLR9Q9NR96 1032 aa12.14□□□□□ -0.47
TM9SF4-203ENST00000417389 ARHGAP28Q9P2N2 729 aa12.14□□□□□ -0.47
TM9SF4-203ENST00000417389 MORC2Q9Y6X9 1032 aaPredicted RBP12.14□□□□□ -0.47
TM9SF4-203ENST00000417389 COL6A3P12111 3177 aa12.13□□□□□ -0.47
TM9SF4-203ENST00000417389 RALGAPA2Q2PPJ7 1873 aa12.13□□□□□ -0.47
TM9SF4-203ENST00000417389 FNDC1Q4ZHG4 1894 aaPredicted RBP12.13□□□□□ -0.47
TM9SF4-203ENST00000417389 CARNS1A5YM72 827 aa12.13□□□□□ -0.47
TM9SF4-203ENST00000417389 ALDH2P05091 517 aa12.13□□□□□ -0.47
TM9SF4-203ENST00000417389 EDN1P05305 212 aa12.13□□□□□ -0.47
TM9SF4-203ENST00000417389 MAPTP10636 758 aaKnown RBP12.13□□□□□ -0.47
TM9SF4-203ENST00000417389 DNAJB1P25685 340 aa12.13□□□□□ -0.47
TM9SF4-203ENST00000417389 LIG4P49917 911 aa12.13□□□□□ -0.47
TM9SF4-203ENST00000417389 AFF1P51825 1210 aaKnown RBP12.13□□□□□ -0.47
TM9SF4-203ENST00000417389 UBE3AQ05086 875 aa12.13□□□□□ -0.47
TM9SF4-203ENST00000417389 PLPP4Q5VZY2 271 aa12.13□□□□□ -0.47
TM9SF4-203ENST00000417389 ZNF280BQ86YH2 543 aa12.13□□□□□ -0.47
TM9SF4-203ENST00000417389 IQUBQ8NA54 791 aa12.13□□□□□ -0.47
TM9SF4-203ENST00000417389 TMEM161BQ8NDZ6 487 aa12.13□□□□□ -0.47
TM9SF4-203ENST00000417389 MRPS27Q92552 414 aaKnown RBP12.13□□□□□ -0.47
TM9SF4-203ENST00000417389 DDX12PQ92771 950 aa12.13□□□□□ -0.47
TM9SF4-203ENST00000417389 STAMQ92783 540 aa12.13□□□□□ -0.47
TM9SF4-203ENST00000417389 ACO2Q99798 780 aaKnown RBP12.13□□□□□ -0.47
TM9SF4-203ENST00000417389 TCF25Q9BQ70 676 aa12.13□□□□□ -0.47
TM9SF4-203ENST00000417389 LRRC27Q9C0I9 530 aa12.13□□□□□ -0.47
TM9SF4-203ENST00000417389 TSHZ2Q9NRE2 1034 aa12.13□□□□□ -0.47
TM9SF4-203ENST00000417389 TBC1D7Q9P0N9 293 aa12.13□□□□□ -0.47
TM9SF4-203ENST00000417389 DNAJB4Q9UDY4 337 aa12.13□□□□□ -0.47
TM9SF4-203ENST00000417389 PCDHA7Q9UN72 937 aa12.13□□□□□ -0.47
TM9SF4-203ENST00000417389 TNFSF13BQ9Y275 285 aa12.13□□□□□ -0.47
TM9SF4-203ENST00000417389 FAN1Q9Y2M0 1017 aa12.13□□□□□ -0.47
TM9SF4-203ENST00000417389 PRG3Q9Y2Y8 225 aaPredicted RBP12.13□□□□□ -0.47
TM9SF4-203ENST00000417389 TRANK1O15050 2925 aa12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 A0A087X0B3 334 aa12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 MYMKA6NI61 221 aa12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 HNRNPDLO14979 420 aaKnown RBP12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 POLR2DO15514 142 aaKnown RBP12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 CLDN3O15551 220 aa12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 RECQL4O94761 1208 aa12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 DDHD2O94830 711 aa12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 GALTP07902 379 aa12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 NMT1P30419 496 aaKnown RBP12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 IRS1P35568 1242 aa12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 SLC11A1P49279 550 aa12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 NUCB2P80303 420 aa12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 AMPD3Q01432 767 aa12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 AAK1Q2M2I8 961 aa12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 HERC4Q5GLZ8 1057 aaPredicted RBP12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 SHC4Q6S5L8 630 aa12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 MPZL3Q6UWV2 235 aa12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 SFR1Q86XK3 245 aa12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 CEP57L1Q8IYX8 460 aa12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 SLC39A11Q8N1S5 342 aa12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 CHAMP1Q96JM3 812 aa12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 NTPCRQ9BSD7 190 aaKnown RBP12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 CDT1Q9H211 546 aa12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 TLE6Q9H808 572 aa12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 MRPL44Q9H9J2 332 aaKnown RBP12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 TOPORSQ9NS56 1045 aaPredicted RBP12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 CLDND1Q9NY35 253 aa12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 RCOR1Q9UKL0 485 aa12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 COG5Q9UP83 839 aa12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 ZDHHC9Q9Y397 364 aa12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 PCDHGC5Q9Y5F6 944 aa12.12□□□□□ -0.47
TM9SF4-203ENST00000417389 GCNT3O95395 438 aa12.11□□□□□ -0.47
TM9SF4-203ENST00000417389 MCF2P10911 925 aa12.11□□□□□ -0.47
TM9SF4-203ENST00000417389 GAP43P17677 238 aa12.11□□□□□ -0.47
TM9SF4-203ENST00000417389 KCNA5P22460 613 aa12.11□□□□□ -0.47
TM9SF4-203ENST00000417389 ABCD1P33897 745 aa12.11□□□□□ -0.47
TM9SF4-203ENST00000417389 NRIP1P48552 1158 aa12.11□□□□□ -0.47
TM9SF4-203ENST00000417389 NCKAP1LP55160 1127 aa12.11□□□□□ -0.47
TM9SF4-203ENST00000417389 ASIC1P78348 528 aa12.11□□□□□ -0.47
TM9SF4-203ENST00000417389 MRPS5P82675 430 aaKnown RBP12.11□□□□□ -0.47
TM9SF4-203ENST00000417389 PLCB3Q01970 1234 aa12.11□□□□□ -0.47
TM9SF4-203ENST00000417389 TFF2Q03403 129 aa12.11□□□□□ -0.47
TM9SF4-203ENST00000417389 GRIK3Q13003 919 aa12.11□□□□□ -0.47
TM9SF4-203ENST00000417389 NOLC1Q14978 699 aaKnown RBP eCLIP12.11□□□□□ -0.47
TM9SF4-203ENST00000417389 TAS1R3Q7RTX0 852 aa12.11□□□□□ -0.47
TM9SF4-203ENST00000417389 CCDC65Q8IXS2 484 aa12.11□□□□□ -0.47
TM9SF4-203ENST00000417389 VPS52Q8N1B4 723 aa12.11□□□□□ -0.47
TM9SF4-203ENST00000417389 LEO1Q8WVC0 666 aaPredicted RBP12.11□□□□□ -0.47
TM9SF4-203ENST00000417389 IGSF21Q96ID5 467 aa12.11□□□□□ -0.47
TM9SF4-203ENST00000417389 ZBTB45Q96K62 511 aaPredicted RBP12.11□□□□□ -0.47
TM9SF4-203ENST00000417389 TMEM175Q9BSA9 504 aa12.11□□□□□ -0.47
TM9SF4-203ENST00000417389 SCAND2PQ9GZW5 306 aaPredicted RBP12.11□□□□□ -0.47
TM9SF4-203ENST00000417389 CUEDC2Q9H467 287 aa12.11□□□□□ -0.47
TM9SF4-203ENST00000417389 PANK4Q9NVE7 773 aa12.11□□□□□ -0.47
TM9SF4-203ENST00000417389 TBX20Q9UMR3 447 aa12.11□□□□□ -0.47
TM9SF4-203ENST00000417389 LZTS1Q9Y250 596 aa12.11□□□□□ -0.47
TM9SF4-203ENST00000417389 MYH15Q9Y2K3 1946 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms