RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 EFEMP2O95967 443 aa10.46□□□□□ -0.73
LINC01238-201ENST00000416204 FGD1P98174 961 aa10.46□□□□□ -0.73
LINC01238-201ENST00000416204 CDC42EP1Q00587 391 aa10.46□□□□□ -0.73
LINC01238-201ENST00000416204 LMNB2Q03252 620 aa10.46□□□□□ -0.73
LINC01238-201ENST00000416204 DSC1Q08554 894 aa10.46□□□□□ -0.73
LINC01238-201ENST00000416204 ZNF528Q3MIS6 628 aa10.46□□□□□ -0.73
LINC01238-201ENST00000416204 PPM1JQ5JR12 505 aa10.46□□□□□ -0.73
LINC01238-201ENST00000416204 RTP2Q5QGT7 225 aa10.46□□□□□ -0.73
LINC01238-201ENST00000416204 LILRA6Q6PI73 481 aa10.46□□□□□ -0.73
LINC01238-201ENST00000416204 CYP26C1Q6V0L0 522 aa10.46□□□□□ -0.73
LINC01238-201ENST00000416204 DHX32Q7L7V1 743 aaKnown RBP10.46□□□□□ -0.73
LINC01238-201ENST00000416204 SKAP1Q86WV1 359 aa10.46□□□□□ -0.73
LINC01238-201ENST00000416204 CEP57Q86XR8 500 aa10.46□□□□□ -0.73
LINC01238-201ENST00000416204 TEX2Q8IWB9 1127 aa10.46□□□□□ -0.73
LINC01238-201ENST00000416204 RNF149Q8NC42 400 aa10.46□□□□□ -0.73
LINC01238-201ENST00000416204 TBCKQ8TEA7 893 aa10.46□□□□□ -0.73
LINC01238-201ENST00000416204 RSPH1Q8WYR4 309 aa10.46□□□□□ -0.73
LINC01238-201ENST00000416204 SECISBP2LQ93073 1101 aaKnown RBP10.46□□□□□ -0.73
LINC01238-201ENST00000416204 CEP170P1Q96L14 293 aa10.46□□□□□ -0.73
LINC01238-201ENST00000416204 DDX23Q9BUQ8 820 aaKnown RBP10.46□□□□□ -0.73
LINC01238-201ENST00000416204 PLA2G2FQ9BZM2 168 aa10.46□□□□□ -0.73
LINC01238-201ENST00000416204 NXF3Q9H4D5 531 aaKnown RBP10.46□□□□□ -0.73
LINC01238-201ENST00000416204 PLEKHA4Q9H4M7 779 aa10.46□□□□□ -0.73
LINC01238-201ENST00000416204 CHST7Q9NS84 486 aa10.46□□□□□ -0.73
LINC01238-201ENST00000416204 ZSCAN32Q9NX65 697 aa10.46□□□□□ -0.73
LINC01238-201ENST00000416204 ZDHHC7Q9NXF8 308 aa10.46□□□□□ -0.73
LINC01238-201ENST00000416204 WRAP73Q9P2S5 460 aaPredicted RBP10.46□□□□□ -0.73
LINC01238-201ENST00000416204 STK39Q9UEW8 545 aa10.46□□□□□ -0.73
LINC01238-201ENST00000416204 FBXO4Q9UKT5 387 aa10.46□□□□□ -0.73
LINC01238-201ENST00000416204 WDR81Q562E7 1941 aa10.46□□□□□ -0.74
LINC01238-201ENST00000416204 DOCK6Q96HP0 2047 aa10.45□□□□□ -0.74
LINC01238-201ENST00000416204 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.45□□□□□ -0.74
LINC01238-201ENST00000416204 ZBTB39O15060 712 aa10.45□□□□□ -0.74
LINC01238-201ENST00000416204 TSPAN1O60635 241 aa10.45□□□□□ -0.74
LINC01238-201ENST00000416204 ERLIN2O94905 339 aa10.45□□□□□ -0.74
LINC01238-201ENST00000416204 ADRB1P08588 477 aa10.45□□□□□ -0.74
LINC01238-201ENST00000416204 GNA11P29992 359 aa10.45□□□□□ -0.74
LINC01238-201ENST00000416204 IRX6P78412 446 aaPredicted RBP10.45□□□□□ -0.74
LINC01238-201ENST00000416204 MTAPQ13126 283 aa10.45□□□□□ -0.74
LINC01238-201ENST00000416204 USP41Q3LFD5 358 aa10.45□□□□□ -0.74
LINC01238-201ENST00000416204 PPM1LQ5SGD2 360 aa10.45□□□□□ -0.74
LINC01238-201ENST00000416204 ZBTB41Q5SVQ8 909 aa10.45□□□□□ -0.74
LINC01238-201ENST00000416204 LIN9Q5TKA1 542 aa10.45□□□□□ -0.74
LINC01238-201ENST00000416204 PRR23BQ6ZRT6 265 aa10.45□□□□□ -0.74
LINC01238-201ENST00000416204 ZBTB44Q8NCP5 570 aa10.45□□□□□ -0.74
LINC01238-201ENST00000416204 CCDC12Q8WUD4 166 aaPredicted RBP10.45□□□□□ -0.74
LINC01238-201ENST00000416204 SLC7A3Q8WY07 619 aa10.45□□□□□ -0.74
LINC01238-201ENST00000416204 COLEC11Q9BWP8 271 aa10.45□□□□□ -0.74
LINC01238-201ENST00000416204 SLC26A6Q9BXS9 759 aa10.45□□□□□ -0.74
LINC01238-201ENST00000416204 RHOBTB2Q9BYZ6 727 aa10.45□□□□□ -0.74
LINC01238-201ENST00000416204 EPC1Q9H2F5 836 aa10.45□□□□□ -0.74
LINC01238-201ENST00000416204 SLKQ9H2G2 1235 aaPredicted RBP10.45□□□□□ -0.74
LINC01238-201ENST00000416204 HEBP1Q9NRV9 189 aa10.45□□□□□ -0.74
LINC01238-201ENST00000416204 GMEB2Q9UKD1 530 aa10.45□□□□□ -0.74
LINC01238-201ENST00000416204 NDRG2Q9UN36 371 aaKnown RBP10.45□□□□□ -0.74
LINC01238-201ENST00000416204 MYH15Q9Y2K3 1946 aa10.45□□□□□ -0.74
LINC01238-201ENST00000416204 CASTOR2A6NHX0 329 aa10.44□□□□□ -0.74
LINC01238-201ENST00000416204 PRR5-ARHGAP8B1AHC4 643 aa10.44□□□□□ -0.74
LINC01238-201ENST00000416204 INO80B-WBP1J3KQ70 363 aa10.44□□□□□ -0.74
LINC01238-201ENST00000416204 B4GALT5O43286 388 aa10.44□□□□□ -0.74
LINC01238-201ENST00000416204 GDF9O60383 454 aa10.44□□□□□ -0.74
LINC01238-201ENST00000416204 NR1I2O75469 434 aa10.44□□□□□ -0.74
LINC01238-201ENST00000416204 TADA2AO75478 443 aa10.44□□□□□ -0.74
LINC01238-201ENST00000416204 NPTXRO95502 500 aa10.44□□□□□ -0.74
LINC01238-201ENST00000416204 C8AP07357 584 aa10.44□□□□□ -0.74
LINC01238-201ENST00000416204 NLRP5P59047 1200 aa10.44□□□□□ -0.74
LINC01238-201ENST00000416204 PSMC5P62195 406 aa10.44□□□□□ -0.74
LINC01238-201ENST00000416204 ARHGAP8P85298 464 aa10.44□□□□□ -0.74
LINC01238-201ENST00000416204 AKAP17AQ02040 695 aaKnown RBP10.44□□□□□ -0.74
LINC01238-201ENST00000416204 PRKCQQ04759 706 aa10.44□□□□□ -0.74
LINC01238-201ENST00000416204 SRSF5Q13243 272 aaKnown RBP10.44□□□□□ -0.74
LINC01238-201ENST00000416204 GRM2Q14416 872 aa10.44□□□□□ -0.74
LINC01238-201ENST00000416204 EMC2Q15006 297 aa10.44□□□□□ -0.74
LINC01238-201ENST00000416204 POTEHQ6S545 545 aa10.44□□□□□ -0.74
LINC01238-201ENST00000416204 SRGAP1Q7Z6B7 1085 aa10.44□□□□□ -0.74
LINC01238-201ENST00000416204 SLC7A14Q8TBB6 771 aa10.44□□□□□ -0.74
LINC01238-201ENST00000416204 BICD2Q8TD16 824 aa10.44□□□□□ -0.74
LINC01238-201ENST00000416204 HDAC7Q8WUI4 952 aa10.44□□□□□ -0.74
LINC01238-201ENST00000416204 PSPC1Q8WXF1 523 aaKnown RBP10.44□□□□□ -0.74
LINC01238-201ENST00000416204 BRF1Q92994 677 aa10.44□□□□□ -0.74
LINC01238-201ENST00000416204 MCRS1Q96EZ8 462 aa10.44□□□□□ -0.74
LINC01238-201ENST00000416204 CLSTN3Q9BQT9 956 aa10.44□□□□□ -0.74
LINC01238-201ENST00000416204 RTKNQ9BST9 563 aa10.44□□□□□ -0.74
LINC01238-201ENST00000416204 PHF20Q9BVI0 1012 aa10.44□□□□□ -0.74
LINC01238-201ENST00000416204 CXCL16Q9H2A7 254 aa10.44□□□□□ -0.74
LINC01238-201ENST00000416204 NCOA5Q9HCD5 579 aaKnown RBP10.44□□□□□ -0.74
LINC01238-201ENST00000416204 PARP2Q9UGN5 583 aa10.44□□□□□ -0.74
LINC01238-201ENST00000416204 FBXW11Q9UKB1 542 aa10.44□□□□□ -0.74
LINC01238-201ENST00000416204 ADAM28Q9UKQ2 775 aa10.44□□□□□ -0.74
LINC01238-201ENST00000416204 MIA3Q5JRA6 1907 aa10.44□□□□□ -0.74
LINC01238-201ENST00000416204 PATJQ8NI35 1801 aa10.43□□□□□ -0.74
LINC01238-201ENST00000416204 PRPF3O43395 683 aaKnown RBP10.43□□□□□ -0.74
LINC01238-201ENST00000416204 SLC37A4O43826 429 aa10.43□□□□□ -0.74
LINC01238-201ENST00000416204 DTNBO60941 627 aa10.43□□□□□ -0.74
LINC01238-201ENST00000416204 LILRB5O75023 590 aa10.43□□□□□ -0.74
LINC01238-201ENST00000416204 KIF4AO95239 1232 aa10.43□□□□□ -0.74
LINC01238-201ENST00000416204 SDHBP21912 280 aa10.43□□□□□ -0.74
LINC01238-201ENST00000416204 IGFBP6P24592 240 aaPredicted RBP10.43□□□□□ -0.74
LINC01238-201ENST00000416204 CCT2P78371 535 aaKnown RBP10.43□□□□□ -0.74
LINC01238-201ENST00000416204 DMWDQ09019 674 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms