RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 SYDE2Q5VT97 1194 aa13.71□□□□□ -0.21
SCN1B-202ENST00000415950 TXNRD3Q86VQ6 643 aa13.71□□□□□ -0.21
SCN1B-202ENST00000415950 KIAA0895Q8NCT3 520 aa13.71□□□□□ -0.21
SCN1B-202ENST00000415950 AGR3Q8TD06 166 aa13.71□□□□□ -0.21
SCN1B-202ENST00000415950 MXD3Q9BW11 206 aa13.71□□□□□ -0.21
SCN1B-202ENST00000415950 THAP2Q9H0W7 228 aa13.71□□□□□ -0.21
SCN1B-202ENST00000415950 DCTN3O75935 186 aa13.71□□□□□ -0.22
SCN1B-202ENST00000415950 INPP1P49441 399 aa13.71□□□□□ -0.22
SCN1B-202ENST00000415950 ERVK-9P63128 1117 aa13.71□□□□□ -0.22
SCN1B-202ENST00000415950 GRB10Q13322 594 aa13.71□□□□□ -0.22
SCN1B-202ENST00000415950 IZUMO3Q5VZ72 239 aa13.71□□□□□ -0.22
SCN1B-202ENST00000415950 PADI6Q6TGC4 694 aa13.71□□□□□ -0.22
SCN1B-202ENST00000415950 KDM7AQ6ZMT4 941 aa13.71□□□□□ -0.22
SCN1B-202ENST00000415950 WDR75Q8IWA0 830 aaKnown RBP13.71□□□□□ -0.22
SCN1B-202ENST00000415950 SEMA4AQ9H3S1 761 aa13.71□□□□□ -0.22
SCN1B-202ENST00000415950 NPHS2Q9NP85 383 aa13.71□□□□□ -0.22
SCN1B-202ENST00000415950 AKT3Q9Y243 479 aa13.71□□□□□ -0.22
SCN1B-202ENST00000415950 ANGPTL3Q9Y5C1 460 aa13.71□□□□□ -0.22
SCN1B-202ENST00000415950 DEPDC5O75140 1603 aa13.71□□□□□ -0.22
SCN1B-202ENST00000415950 F5H6K3 240 aa13.71□□□□□ -0.22
SCN1B-202ENST00000415950 KRT37O76014 449 aa13.71□□□□□ -0.22
SCN1B-202ENST00000415950 ANP32DO95626 131 aa13.71□□□□□ -0.22
SCN1B-202ENST00000415950 EEF1DP29692 281 aaKnown RBP13.71□□□□□ -0.22
SCN1B-202ENST00000415950 ATICP31939 592 aa13.71□□□□□ -0.22
SCN1B-202ENST00000415950 KDSRQ06136 332 aa13.71□□□□□ -0.22
SCN1B-202ENST00000415950 KLRC3Q07444 240 aa13.71□□□□□ -0.22
SCN1B-202ENST00000415950 PDIA2Q13087 525 aaKnown RBP13.71□□□□□ -0.22
SCN1B-202ENST00000415950 XXYLT1Q8NBI6 393 aa13.71□□□□□ -0.22
SCN1B-202ENST00000415950 DEPDC1BQ8WUY9 529 aa13.71□□□□□ -0.22
SCN1B-202ENST00000415950 EIF2AK1Q9BQI3 630 aaKnown RBP13.71□□□□□ -0.22
SCN1B-202ENST00000415950 FAM213AQ9BRX8 229 aa13.71□□□□□ -0.22
SCN1B-202ENST00000415950 WARS2Q9UGM6 360 aaKnown RBP13.71□□□□□ -0.22
SCN1B-202ENST00000415950 DDX20Q9UHI6 824 aaKnown RBP13.71□□□□□ -0.22
SCN1B-202ENST00000415950 REXO2Q9Y3B8 237 aaKnown RBP13.71□□□□□ -0.22
SCN1B-202ENST00000415950 TLR3O15455 904 aaKnown RBP13.7□□□□□ -0.22
SCN1B-202ENST00000415950 HSPA4LO95757 839 aa13.7□□□□□ -0.22
SCN1B-202ENST00000415950 SERPINB2P05120 415 aa13.7□□□□□ -0.22
SCN1B-202ENST00000415950 CDR2Q01850 454 aa13.7□□□□□ -0.22
SCN1B-202ENST00000415950 NFIXQ14938 502 aa13.7□□□□□ -0.22
SCN1B-202ENST00000415950 GADL1Q6ZQY3 521 aa13.7□□□□□ -0.22
SCN1B-202ENST00000415950 BRINP3Q76B58 766 aa13.7□□□□□ -0.22
SCN1B-202ENST00000415950 FAF2Q96CS3 445 aa13.7□□□□□ -0.22
SCN1B-202ENST00000415950 STAMBPL1Q96FJ0 436 aa13.7□□□□□ -0.22
SCN1B-202ENST00000415950 VPS11Q9H270 941 aa13.7□□□□□ -0.22
SCN1B-202ENST00000415950 ZBTB12Q9Y330 459 aaPredicted RBP13.7□□□□□ -0.22
SCN1B-202ENST00000415950 IQANK1A0A1B0GTG1 560 aa13.7□□□□□ -0.22
SCN1B-202ENST00000415950 HAUS5O94927 633 aa13.7□□□□□ -0.22
SCN1B-202ENST00000415950 RASA1P20936 1047 aa13.7□□□□□ -0.22
SCN1B-202ENST00000415950 VAMP7P51809 220 aa13.7□□□□□ -0.22
SCN1B-202ENST00000415950 OVGP1Q12889 678 aa13.7□□□□□ -0.22
SCN1B-202ENST00000415950 SPOUT1Q5T280 376 aaKnown RBP13.7□□□□□ -0.22
SCN1B-202ENST00000415950 ERICH1Q86X53 443 aa13.7□□□□□ -0.22
SCN1B-202ENST00000415950 CPA5Q8WXQ8 436 aa13.7□□□□□ -0.22
SCN1B-202ENST00000415950 SCAF8Q9UPN6 1271 aaKnown RBP13.7□□□□□ -0.22
SCN1B-202ENST00000415950 SPDYE2BA6NHP3 402 aa13.7□□□□□ -0.22
SCN1B-202ENST00000415950 SPDYE6P0CI01 402 aa13.7□□□□□ -0.22
SCN1B-202ENST00000415950 TAL1P17542 331 aaPredicted RBP13.7□□□□□ -0.22
SCN1B-202ENST00000415950 PSMA2P25787 234 aa13.7□□□□□ -0.22
SCN1B-202ENST00000415950 NAIF1Q69YI7 327 aaPredicted RBP13.7□□□□□ -0.22
SCN1B-202ENST00000415950 TRIM67Q6ZTA4 783 aa13.7□□□□□ -0.22
SCN1B-202ENST00000415950 ZNF571Q7Z3V5 609 aaPredicted RBP13.7□□□□□ -0.22
SCN1B-202ENST00000415950 HEXIM2Q96MH2 286 aaKnown RBP13.7□□□□□ -0.22
SCN1B-202ENST00000415950 EDEM3Q9BZQ6 932 aa13.7□□□□□ -0.22
SCN1B-202ENST00000415950 TDRD3Q9H7E2 651 aaKnown RBP13.7□□□□□ -0.22
SCN1B-202ENST00000415950 PLEKHG2Q9H7P9 1386 aa13.7□□□□□ -0.22
SCN1B-202ENST00000415950 SPATA31A3Q5VYP0 1347 aa13.7□□□□□ -0.22
SCN1B-202ENST00000415950 K7ERI5 159 aa13.69□□□□□ -0.22
SCN1B-202ENST00000415950 UBOX5O94941 541 aa13.69□□□□□ -0.22
SCN1B-202ENST00000415950 PAX7P23759 505 aa13.69□□□□□ -0.22
SCN1B-202ENST00000415950 HSPA9P38646 679 aaKnown RBP13.69□□□□□ -0.22
SCN1B-202ENST00000415950 IFI35P80217 286 aaPredicted RBP13.69□□□□□ -0.22
SCN1B-202ENST00000415950 NT5DC1Q5TFE4 455 aa13.69□□□□□ -0.22
SCN1B-202ENST00000415950 RGS9BPQ6ZS82 235 aa13.69□□□□□ -0.22
SCN1B-202ENST00000415950 ZBTB10Q96DT7 871 aa13.69□□□□□ -0.22
SCN1B-202ENST00000415950 ANKRD36BP1Q96IX9 119 aa13.69□□□□□ -0.22
SCN1B-202ENST00000415950 AGPAT1Q99943 283 aa13.69□□□□□ -0.22
SCN1B-202ENST00000415950 HSD3B7Q9H2F3 369 aa13.69□□□□□ -0.22
SCN1B-202ENST00000415950 CSADQ9Y600 493 aa13.69□□□□□ -0.22
SCN1B-202ENST00000415950 ADGRB2O60241 1585 aa13.69□□□□□ -0.22
SCN1B-202ENST00000415950 TARSP26639 723 aaKnown RBP13.69□□□□□ -0.22
SCN1B-202ENST00000415950 STAT2P52630 851 aa13.69□□□□□ -0.22
SCN1B-202ENST00000415950 NOP14P78316 857 aaKnown RBP13.69□□□□□ -0.22
SCN1B-202ENST00000415950 RSPH3Q86UC2 560 aa13.69□□□□□ -0.22
SCN1B-202ENST00000415950 TPCN2Q8NHX9 752 aa13.69□□□□□ -0.22
SCN1B-202ENST00000415950 TUBB6Q9BUF5 446 aa13.69□□□□□ -0.22
SCN1B-202ENST00000415950 TRPC5Q9UL62 973 aaPredicted RBP13.69□□□□□ -0.22
SCN1B-202ENST00000415950 ARL2BPQ9Y2Y0 163 aa13.69□□□□□ -0.22
SCN1B-202ENST00000415950 OPLAHO14841 1288 aa13.69□□□□□ -0.22
SCN1B-202ENST00000415950 THOC5Q13769 683 aaKnown RBP13.69□□□□□ -0.22
SCN1B-202ENST00000415950 RABGAP1LQ5R372 815 aa13.69□□□□□ -0.22
SCN1B-202ENST00000415950 ATG16L1Q676U5 607 aa13.69□□□□□ -0.22
SCN1B-202ENST00000415950 HACE1Q8IYU2 909 aa13.69□□□□□ -0.22
SCN1B-202ENST00000415950 CCHCR1Q8TD31 782 aa13.69□□□□□ -0.22
SCN1B-202ENST00000415950 ACSF2Q96CM8 615 aaPredicted RBP13.69□□□□□ -0.22
SCN1B-202ENST00000415950 UBN1Q9NPG3 1134 aa13.69□□□□□ -0.22
SCN1B-202ENST00000415950 PRPSAP1Q14558 356 aa13.69□□□□□ -0.22
SCN1B-202ENST00000415950 NKX2-3Q8TAU0 364 aa13.69□□□□□ -0.22
SCN1B-202ENST00000415950 STK32BQ9NY57 414 aa13.69□□□□□ -0.22
SCN1B-202ENST00000415950 CLTCQ00610 1675 aaKnown RBP13.68□□□□□ -0.22
SCN1B-202ENST00000415950 ZNF233A6NK53 670 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms