RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 GLI4P10075 376 aa7.34□□□□□ -1.23
EPHA4-204ENST00000415749 GNAT1P11488 350 aa7.34□□□□□ -1.23
EPHA4-204ENST00000415749 RECQLP46063 649 aaPredicted RBP7.34□□□□□ -1.23
EPHA4-204ENST00000415749 ERVK-21P61565 698 aa7.34□□□□□ -1.23
EPHA4-204ENST00000415749 DSG1Q02413 1049 aa7.34□□□□□ -1.23
EPHA4-204ENST00000415749 NR1I3Q14994 352 aa7.34□□□□□ -1.23
EPHA4-204ENST00000415749 HLFQ16534 295 aa7.34□□□□□ -1.23
EPHA4-204ENST00000415749 FAM83BQ5T0W9 1011 aa7.34□□□□□ -1.23
EPHA4-204ENST00000415749 FBXO46Q6PJ61 603 aaPredicted RBP7.34□□□□□ -1.23
EPHA4-204ENST00000415749 PAQR3Q6TCH7 311 aa7.34□□□□□ -1.23
EPHA4-204ENST00000415749 EPM2AIP1Q7L775 607 aaPredicted RBP7.34□□□□□ -1.23
EPHA4-204ENST00000415749 IRF2BP1Q8IU81 584 aa7.34□□□□□ -1.23
EPHA4-204ENST00000415749 SUPT20HQ8NEM7 779 aa7.34□□□□□ -1.23
EPHA4-204ENST00000415749 AHCYL2Q96HN2 611 aaKnown RBP7.34□□□□□ -1.23
EPHA4-204ENST00000415749 STRBPQ96SI9 672 aaKnown RBP7.34□□□□□ -1.23
EPHA4-204ENST00000415749 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.34□□□□□ -1.23
EPHA4-204ENST00000415749 CELF4Q9BZC1 486 aaKnown RBP7.34□□□□□ -1.23
EPHA4-204ENST00000415749 AP5M1Q9H0R1 490 aa7.34□□□□□ -1.23
EPHA4-204ENST00000415749 ANLNQ9NQW6 1124 aa7.34□□□□□ -1.23
EPHA4-204ENST00000415749 THG1LQ9NWX6 298 aaKnown RBP7.34□□□□□ -1.23
EPHA4-204ENST00000415749 PPARGC1AQ9UBK2 798 aaKnown RBP7.34□□□□□ -1.23
EPHA4-204ENST00000415749 PUF60Q9UHX1 559 aaKnown RBP7.34□□□□□ -1.23
EPHA4-204ENST00000415749 DBR1Q9UK59 544 aaKnown RBP7.34□□□□□ -1.23
EPHA4-204ENST00000415749 ZKSCAN5Q9Y2L8 839 aa7.34□□□□□ -1.23
EPHA4-204ENST00000415749 CDHR2Q9BYE9 1310 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 AKAP11Q9UKA4 1901 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 SCN7AQ01118 1682 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 PRAMEF22A3QJZ6 481 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 OR14I1A6ND48 311 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 BTBD11A6QL63 1104 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 ABLIM1O14639 778 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 EFEMP2O95967 443 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 NTRK1P04629 796 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 SNRPA1P09661 255 aaKnown RBP7.33□□□□□ -1.24
EPHA4-204ENST00000415749 ITGB5P18084 799 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 CD53P19397 219 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 HTR3AP46098 478 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 SLC6A11P48066 632 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 GALK1P51570 392 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 POU5F1BQ06416 359 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 FAPQ12884 760 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 FOXD4Q12950 439 aaPredicted RBP7.33□□□□□ -1.24
EPHA4-204ENST00000415749 KLF1Q13351 362 aaPredicted RBP7.33□□□□□ -1.24
EPHA4-204ENST00000415749 GTF2H3Q13889 308 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 GBX1Q14549 363 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 SAFBQ15424 915 aaKnown RBP eCLIP7.33□□□□□ -1.24
EPHA4-204ENST00000415749 CRY1Q16526 586 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 ADGRF1Q5T601 910 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 OLFML2BQ68BL8 750 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 ERAP2Q6P179 960 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 C16orf59Q7L2K0 433 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 PAF1Q8N7H5 531 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 IGSF22Q8N9C0 903 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 MYRIPQ8NFW9 859 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 SEC14L1Q92503 715 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 DCPSQ96C86 337 aaKnown RBP7.33□□□□□ -1.24
EPHA4-204ENST00000415749 PEX11GQ96HA9 241 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 FAXDC2Q96IV6 333 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 KCNJ15Q99712 375 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 ELAC2Q9BQ52 826 aaKnown RBP7.33□□□□□ -1.24
EPHA4-204ENST00000415749 JAM3Q9BX67 310 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 CDIP1Q9H305 208 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 EMC7Q9NPA0 242 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 CATSPERZQ9NTU4 200 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 SPTLC3Q9NUV7 552 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 DDX20Q9UHI6 824 aaKnown RBP7.33□□□□□ -1.24
EPHA4-204ENST00000415749 ATP6V0A2Q9Y487 856 aa7.33□□□□□ -1.24
EPHA4-204ENST00000415749 KIF7Q2M1P5 1343 aa7.32□□□□□ -1.24
EPHA4-204ENST00000415749 ANO9A1A5B4 782 aa7.32□□□□□ -1.24
EPHA4-204ENST00000415749 CCDC66A2RUB6 948 aa7.32□□□□□ -1.24
EPHA4-204ENST00000415749 ULK1O75385 1050 aa7.32□□□□□ -1.24
EPHA4-204ENST00000415749 PAPLNO95428 1278 aa7.32□□□□□ -1.24
EPHA4-204ENST00000415749 LTFP02788 710 aa7.32□□□□□ -1.24
EPHA4-204ENST00000415749 DBHP09172 617 aa7.32□□□□□ -1.24
EPHA4-204ENST00000415749 LPOP22079 712 aaPredicted RBP7.32□□□□□ -1.24
EPHA4-204ENST00000415749 SERPINB3P29508 390 aa7.32□□□□□ -1.24
EPHA4-204ENST00000415749 LSSP48449 732 aa7.32□□□□□ -1.24
EPHA4-204ENST00000415749 RAB3GAP1Q15042 981 aa7.32□□□□□ -1.24
EPHA4-204ENST00000415749 TMEM240Q5SV17 173 aa7.32□□□□□ -1.24
EPHA4-204ENST00000415749 PGM2L1Q6PCE3 622 aa7.32□□□□□ -1.24
EPHA4-204ENST00000415749 C11orf74Q86VG3 221 aa7.32□□□□□ -1.24
EPHA4-204ENST00000415749 SLC17A8Q8NDX2 589 aa7.32□□□□□ -1.24
EPHA4-204ENST00000415749 CHTF18Q8WVB6 975 aa7.32□□□□□ -1.24
EPHA4-204ENST00000415749 FAM168AQ92567 244 aa7.32□□□□□ -1.24
EPHA4-204ENST00000415749 DPF2Q92785 391 aa7.32□□□□□ -1.24
EPHA4-204ENST00000415749 CASS4Q9NQ75 786 aa7.32□□□□□ -1.24
EPHA4-204ENST00000415749 SAP30BPQ9UHR5 308 aaKnown RBP7.32□□□□□ -1.24
EPHA4-204ENST00000415749 POLR2AP24928 1970 aaKnown RBP7.31□□□□□ -1.24
EPHA4-204ENST00000415749 ADM5C9JUS6 153 aa7.31□□□□□ -1.24
EPHA4-204ENST00000415749 TCEA3O75764 348 aa7.31□□□□□ -1.24
EPHA4-204ENST00000415749 BBOX1O75936 387 aa7.31□□□□□ -1.24
EPHA4-204ENST00000415749 DNM2P50570 870 aa7.31□□□□□ -1.24
EPHA4-204ENST00000415749 LMOD3Q0VAK6 560 aa7.31□□□□□ -1.24
EPHA4-204ENST00000415749 KIAA2012Q0VF49 1180 aa7.31□□□□□ -1.24
EPHA4-204ENST00000415749 ODF1Q14990 250 aa7.31□□□□□ -1.24
EPHA4-204ENST00000415749 TMEM95Q3KNT9 176 aa7.31□□□□□ -1.24
EPHA4-204ENST00000415749 TBC1D10BQ4KMP7 808 aaPredicted RBP7.31□□□□□ -1.24
EPHA4-204ENST00000415749 STEAP3Q658P3 488 aa7.31□□□□□ -1.24
EPHA4-204ENST00000415749 MPZL3Q6UWV2 235 aa7.31□□□□□ -1.24
EPHA4-204ENST00000415749 DPP8Q6V1X1 898 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms