RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 GUF1Q8N442 669 aaKnown RBP13.05□□□□□ -0.32
ATG4B-207ENST00000415107 SMARCE1Q969G3 411 aa13.05□□□□□ -0.32
ATG4B-207ENST00000415107 MRPL9Q9BYD2 267 aaKnown RBP13.05□□□□□ -0.32
ATG4B-207ENST00000415107 TRIM6Q9C030 488 aaPredicted RBP13.05□□□□□ -0.32
ATG4B-207ENST00000415107 TMEM117Q9H0C3 514 aa13.05□□□□□ -0.32
ATG4B-207ENST00000415107 RNF19AQ9NV58 838 aa13.05□□□□□ -0.32
ATG4B-207ENST00000415107 FNDC1Q4ZHG4 1894 aaPredicted RBP13.05□□□□□ -0.32
ATG4B-207ENST00000415107 TRIOBPQ9H2D6 2365 aa13.05□□□□□ -0.32
ATG4B-207ENST00000415107 RALGAPA2Q2PPJ7 1873 aa13.04□□□□□ -0.32
ATG4B-207ENST00000415107 A0A0B4J269 797 aa13.04□□□□□ -0.32
ATG4B-207ENST00000415107 ADRB2P07550 413 aa13.04□□□□□ -0.32
ATG4B-207ENST00000415107 HOXD13P35453 343 aa13.04□□□□□ -0.32
ATG4B-207ENST00000415107 KCNA1Q09470 495 aa13.04□□□□□ -0.32
ATG4B-207ENST00000415107 NFIL3Q16649 462 aa13.04□□□□□ -0.32
ATG4B-207ENST00000415107 XKR4Q5GH76 650 aa13.04□□□□□ -0.32
ATG4B-207ENST00000415107 ZNF658Q5TYW1 1059 aaPredicted RBP13.04□□□□□ -0.32
ATG4B-207ENST00000415107 AGMOQ6ZNB7 445 aa13.04□□□□□ -0.32
ATG4B-207ENST00000415107 GLIS3Q8NEA6 775 aa13.04□□□□□ -0.32
ATG4B-207ENST00000415107 GOLGA5Q8TBA6 731 aa13.04□□□□□ -0.32
ATG4B-207ENST00000415107 PBX4Q9BYU1 374 aa13.04□□□□□ -0.32
ATG4B-207ENST00000415107 GBP3Q9H0R5 595 aa13.04□□□□□ -0.32
ATG4B-207ENST00000415107 RSAD1Q9HA92 442 aa13.04□□□□□ -0.32
ATG4B-207ENST00000415107 TBC1D7Q9P0N9 293 aa13.04□□□□□ -0.32
ATG4B-207ENST00000415107 KIAA1468Q9P260 1216 aa13.04□□□□□ -0.32
ATG4B-207ENST00000415107 LRFN2Q9ULH4 789 aa13.04□□□□□ -0.32
ATG4B-207ENST00000415107 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.04□□□□□ -0.32
ATG4B-207ENST00000415107 GBF1Q92538 1859 aa13.04□□□□□ -0.32
ATG4B-207ENST00000415107 PDXKO00764 312 aa13.03□□□□□ -0.32
ATG4B-207ENST00000415107 OGTO15294 1046 aa13.03□□□□□ -0.32
ATG4B-207ENST00000415107 TLL1O43897 1013 aa13.03□□□□□ -0.32
ATG4B-207ENST00000415107 PRPF6O94906 941 aaKnown RBP13.03□□□□□ -0.32
ATG4B-207ENST00000415107 NPTXRO95502 500 aa13.03□□□□□ -0.32
ATG4B-207ENST00000415107 ADSSP30520 456 aa13.03□□□□□ -0.32
ATG4B-207ENST00000415107 MYBPC2Q14324 1141 aa13.03□□□□□ -0.32
ATG4B-207ENST00000415107 HSP90AA2PQ14568 343 aaPredicted RBP13.03□□□□□ -0.32
ATG4B-207ENST00000415107 KNOP1Q1ED39 458 aaKnown RBP13.03□□□□□ -0.32
ATG4B-207ENST00000415107 TPRNQ4KMQ1 711 aa13.03□□□□□ -0.32
ATG4B-207ENST00000415107 CLLU1OSQ5K130 101 aa13.03□□□□□ -0.32
ATG4B-207ENST00000415107 FAM109BQ6ICB4 259 aaPredicted RBP13.03□□□□□ -0.32
ATG4B-207ENST00000415107 SLC9A9Q8IVB4 645 aa13.03□□□□□ -0.32
ATG4B-207ENST00000415107 LRRC43Q8N309 656 aa13.03□□□□□ -0.32
ATG4B-207ENST00000415107 CLP1Q92989 425 aaKnown RBP13.03□□□□□ -0.32
ATG4B-207ENST00000415107 HPS3Q969F9 1004 aa13.03□□□□□ -0.32
ATG4B-207ENST00000415107 BICD1Q96G01 975 aa13.03□□□□□ -0.32
ATG4B-207ENST00000415107 TSPAN18Q96SJ8 248 aa13.03□□□□□ -0.32
ATG4B-207ENST00000415107 HAPLN2Q9GZV7 340 aa13.03□□□□□ -0.32
ATG4B-207ENST00000415107 NUP62CLQ9H1M0 184 aa13.03□□□□□ -0.32
ATG4B-207ENST00000415107 KCTD10Q9H3F6 313 aa13.03□□□□□ -0.32
ATG4B-207ENST00000415107 NXF3Q9H4D5 531 aaKnown RBP13.03□□□□□ -0.32
ATG4B-207ENST00000415107 SLC39A2Q9NP94 309 aa13.03□□□□□ -0.32
ATG4B-207ENST00000415107 TYW1Q9NV66 732 aaKnown RBP13.03□□□□□ -0.32
ATG4B-207ENST00000415107 TGFB1I1O43294 461 aa13.02□□□□□ -0.33
ATG4B-207ENST00000415107 OFD1O75665 1012 aa13.02□□□□□ -0.33
ATG4B-207ENST00000415107 LDHAP00338 332 aaKnown RBP13.02□□□□□ -0.33
ATG4B-207ENST00000415107 LINC00271P0C7V0 271 aa13.02□□□□□ -0.33
ATG4B-207ENST00000415107 ITGA4P13612 1032 aa13.02□□□□□ -0.33
ATG4B-207ENST00000415107 MORC3Q14149 939 aa13.02□□□□□ -0.33
ATG4B-207ENST00000415107 TMEM132AQ24JP5 1023 aa13.02□□□□□ -0.33
ATG4B-207ENST00000415107 ZCWPW2Q504Y3 356 aa13.02□□□□□ -0.33
ATG4B-207ENST00000415107 GLB1LQ6UWU2 654 aa13.02□□□□□ -0.33
ATG4B-207ENST00000415107 HS2ST1Q7LGA3 356 aa13.02□□□□□ -0.33
ATG4B-207ENST00000415107 CDR2LQ86X02 465 aaPredicted RBP13.02□□□□□ -0.33
ATG4B-207ENST00000415107 GSTCDQ8NEC7 633 aa13.02□□□□□ -0.33
ATG4B-207ENST00000415107 ZBTB45Q96K62 511 aaPredicted RBP13.02□□□□□ -0.33
ATG4B-207ENST00000415107 FBXL18Q96ME1 805 aa13.02□□□□□ -0.33
ATG4B-207ENST00000415107 SAMD11Q96NU1 681 aa13.02□□□□□ -0.33
ATG4B-207ENST00000415107 CASD1Q96PB1 797 aa13.02□□□□□ -0.33
ATG4B-207ENST00000415107 YME1L1Q96TA2 773 aa13.02□□□□□ -0.33
ATG4B-207ENST00000415107 CCDC94Q9BW85 323 aaPredicted RBP13.02□□□□□ -0.33
ATG4B-207ENST00000415107 PLEKHA5Q9HAU0 1116 aa13.02□□□□□ -0.33
ATG4B-207ENST00000415107 TOPORSQ9NS56 1045 aaPredicted RBP13.02□□□□□ -0.33
ATG4B-207ENST00000415107 KANSL3Q9P2N6 904 aa13.02□□□□□ -0.33
ATG4B-207ENST00000415107 ANKFY1Q9P2R3 1169 aa13.02□□□□□ -0.33
ATG4B-207ENST00000415107 MSRAQ9UJ68 235 aa13.02□□□□□ -0.33
ATG4B-207ENST00000415107 MAN1B1Q9UKM7 699 aa13.02□□□□□ -0.33
ATG4B-207ENST00000415107 TRAF3IP3Q9Y228 551 aa13.02□□□□□ -0.33
ATG4B-207ENST00000415107 RWDD3Q9Y3V2 267 aa13.02□□□□□ -0.33
ATG4B-207ENST00000415107 LAMA2P24043 3122 aaKnown RBP13.02□□□□□ -0.33
ATG4B-207ENST00000415107 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.01□□□□□ -0.33
ATG4B-207ENST00000415107 MEIS3P2A8K0S8 358 aa13.01□□□□□ -0.33
ATG4B-207ENST00000415107 ANKRD63C9JTQ0 380 aa13.01□□□□□ -0.33
ATG4B-207ENST00000415107 RECQL4O94761 1208 aa13.01□□□□□ -0.33
ATG4B-207ENST00000415107 CLTAP09496 248 aa13.01□□□□□ -0.33
ATG4B-207ENST00000415107 DNAJB2P25686 324 aa13.01□□□□□ -0.33
ATG4B-207ENST00000415107 KLHL40Q2TBA0 621 aa13.01□□□□□ -0.33
ATG4B-207ENST00000415107 EDRF1Q3B7T1 1238 aa13.01□□□□□ -0.33
ATG4B-207ENST00000415107 HABP4Q5JVS0 413 aaKnown RBP13.01□□□□□ -0.33
ATG4B-207ENST00000415107 ALKAL1Q6UXT8 129 aa13.01□□□□□ -0.33
ATG4B-207ENST00000415107 CD302Q8IX05 232 aa13.01□□□□□ -0.33
ATG4B-207ENST00000415107 ABI1Q8IZP0 508 aa13.01□□□□□ -0.33
ATG4B-207ENST00000415107 SYCP3Q8IZU3 236 aa13.01□□□□□ -0.33
ATG4B-207ENST00000415107 TCHPQ9BT92 498 aa13.01□□□□□ -0.33
ATG4B-207ENST00000415107 ZBED2Q9BTP6 218 aa13.01□□□□□ -0.33
ATG4B-207ENST00000415107 MSTO1Q9BUK6 570 aa13.01□□□□□ -0.33
ATG4B-207ENST00000415107 RNF39Q9H2S5 420 aa13.01□□□□□ -0.33
ATG4B-207ENST00000415107 KIAA1586Q9HCI6 787 aa13.01□□□□□ -0.33
ATG4B-207ENST00000415107 AGPAT3Q9NRZ7 376 aa13.01□□□□□ -0.33
ATG4B-207ENST00000415107 CNTN3Q9P232 1028 aa13.01□□□□□ -0.33
ATG4B-207ENST00000415107 CPSF3Q9UKF6 684 aaKnown RBP13.01□□□□□ -0.33
ATG4B-207ENST00000415107 AGO2Q9UKV8 859 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms