RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 CDY2AQ9Y6F7 541 aa16.92■□□□□ 0.3
SHMT2-202ENST00000414700 STYXL1Q9Y6J8 313 aa16.92■□□□□ 0.3
SHMT2-202ENST00000414700 LAMA2P24043 3122 aaKnown RBP16.91■□□□□ 0.3
SHMT2-202ENST00000414700 A0A1B0GTH6 734 aa16.91■□□□□ 0.3
SHMT2-202ENST00000414700 ABLIM1O14639 778 aa16.91■□□□□ 0.3
SHMT2-202ENST00000414700 CHRNA1P02708 482 aa16.91■□□□□ 0.3
SHMT2-202ENST00000414700 HARSP12081 509 aaKnown RBP16.91■□□□□ 0.3
SHMT2-202ENST00000414700 DARSP14868 501 aaKnown RBP16.91■□□□□ 0.3
SHMT2-202ENST00000414700 ARF4P18085 180 aaPredicted RBP16.91■□□□□ 0.3
SHMT2-202ENST00000414700 EIF4BP23588 611 aaKnown RBP16.91■□□□□ 0.3
SHMT2-202ENST00000414700 THPOP40225 353 aa16.91■□□□□ 0.3
SHMT2-202ENST00000414700 CDK7P50613 346 aa16.91■□□□□ 0.3
SHMT2-202ENST00000414700 ZBTB41Q5SVQ8 909 aa16.91■□□□□ 0.3
SHMT2-202ENST00000414700 FBXO38Q6PIJ6 1188 aa16.91■□□□□ 0.3
SHMT2-202ENST00000414700 SRGAP1Q7Z6B7 1085 aa16.91■□□□□ 0.3
SHMT2-202ENST00000414700 ZBTB33Q86T24 672 aa16.91■□□□□ 0.3
SHMT2-202ENST00000414700 CBWD2Q8IUF1 395 aa16.91■□□□□ 0.3
SHMT2-202ENST00000414700 FAM114A1Q8IWE2 563 aa16.91■□□□□ 0.3
SHMT2-202ENST00000414700 NME8Q8N427 588 aa16.91■□□□□ 0.3
SHMT2-202ENST00000414700 XXYLT1Q8NBI6 393 aa16.91■□□□□ 0.3
SHMT2-202ENST00000414700 TMEM174Q8WUU8 243 aa16.91■□□□□ 0.3
SHMT2-202ENST00000414700 ZNF592Q92610 1267 aa16.91■□□□□ 0.3
SHMT2-202ENST00000414700 BORCS6Q96GS4 357 aa16.91■□□□□ 0.3
SHMT2-202ENST00000414700 CELF4Q9BZC1 486 aaKnown RBP16.91■□□□□ 0.3
SHMT2-202ENST00000414700 GCOM2Q9BZD3 368 aaPredicted RBP16.91■□□□□ 0.3
SHMT2-202ENST00000414700 TSPAN1O60635 241 aa16.91■□□□□ 0.3
SHMT2-202ENST00000414700 TOM1L1O75674 476 aa16.91■□□□□ 0.3
SHMT2-202ENST00000414700 ADRB2P07550 413 aa16.91■□□□□ 0.3
SHMT2-202ENST00000414700 GJA8P48165 433 aa16.91■□□□□ 0.3
SHMT2-202ENST00000414700 MARSP56192 900 aaKnown RBP16.91■□□□□ 0.3
SHMT2-202ENST00000414700 SNRPFP62306 86 aaKnown RBP16.91■□□□□ 0.3
SHMT2-202ENST00000414700 MRPS6P82932 125 aaKnown RBP16.91■□□□□ 0.3
SHMT2-202ENST00000414700 PTPN11Q06124 597 aaPredicted RBP16.91■□□□□ 0.3
SHMT2-202ENST00000414700 FAM187BQ17R55 369 aa16.91■□□□□ 0.3
SHMT2-202ENST00000414700 TRIM71Q2Q1W2 868 aaKnown RBP16.91■□□□□ 0.3
SHMT2-202ENST00000414700 ATF7IP2Q5U623 682 aa16.91■□□□□ 0.3
SHMT2-202ENST00000414700 ZPBP2Q6X784 338 aa16.91■□□□□ 0.3
SHMT2-202ENST00000414700 NYAP1Q6ZVC0 841 aa16.91■□□□□ 0.3
SHMT2-202ENST00000414700 TRIM59Q8IWR1 403 aa16.91■□□□□ 0.3
SHMT2-202ENST00000414700 FAM186BQ8IYM0 893 aa16.91■□□□□ 0.3
SHMT2-202ENST00000414700 MCOLN1Q9GZU1 580 aa16.91■□□□□ 0.3
SHMT2-202ENST00000414700 CNTNAP2Q9UHC6 1331 aa16.9■□□□□ 0.3
SHMT2-202ENST00000414700 A0A0B4J269 797 aa16.9■□□□□ 0.3
SHMT2-202ENST00000414700 N4BP3O15049 544 aa16.9■□□□□ 0.3
SHMT2-202ENST00000414700 CLDN3O15551 220 aa16.9■□□□□ 0.3
SHMT2-202ENST00000414700 GARTP22102 1010 aa16.9■□□□□ 0.3
SHMT2-202ENST00000414700 PSMC2P35998 433 aaKnown RBP16.9■□□□□ 0.3
SHMT2-202ENST00000414700 MATR3P43243 847 aaKnown RBP eCLIP16.9■□□□□ 0.3
SHMT2-202ENST00000414700 ACOT2P49753 483 aa16.9■□□□□ 0.3
SHMT2-202ENST00000414700 CDC42EP1Q00587 391 aa16.9■□□□□ 0.3
SHMT2-202ENST00000414700 NR1I3Q14994 352 aa16.9■□□□□ 0.3
SHMT2-202ENST00000414700 TSHZ1Q6ZSZ6 1077 aa16.9■□□□□ 0.3
SHMT2-202ENST00000414700 FAM213AQ9BRX8 229 aa16.9■□□□□ 0.3
SHMT2-202ENST00000414700 TCHPQ9BT92 498 aa16.9■□□□□ 0.3
SHMT2-202ENST00000414700 PTPRHQ9HD43 1115 aa16.9■□□□□ 0.3
SHMT2-202ENST00000414700 ARMCX3Q9UH62 379 aaPredicted RBP16.9■□□□□ 0.3
SHMT2-202ENST00000414700 AGO2Q9UKV8 859 aaKnown RBP16.9■□□□□ 0.3
SHMT2-202ENST00000414700 FRMD4BQ9Y2L6 1034 aa16.9■□□□□ 0.3
SHMT2-202ENST00000414700 ERICH4A6NGS2 130 aa16.89■□□□□ 0.29
SHMT2-202ENST00000414700 PES1O00541 588 aaKnown RBP16.89■□□□□ 0.29
SHMT2-202ENST00000414700 ERLIN2O94905 339 aa16.89■□□□□ 0.29
SHMT2-202ENST00000414700 EPB41P11171 864 aaKnown RBP16.89■□□□□ 0.29
SHMT2-202ENST00000414700 PROZP22891 400 aa16.89■□□□□ 0.29
SHMT2-202ENST00000414700 HOXA11P31270 313 aaPredicted RBP16.89■□□□□ 0.29
SHMT2-202ENST00000414700 CRYBB1P53674 252 aaPredicted RBP16.89■□□□□ 0.29
SHMT2-202ENST00000414700 MGAT3Q09327 533 aa16.89■□□□□ 0.29
SHMT2-202ENST00000414700 PTK7Q13308 1070 aa16.89■□□□□ 0.29
SHMT2-202ENST00000414700 MYBPC2Q14324 1141 aa16.89■□□□□ 0.29
SHMT2-202ENST00000414700 SNRNP35Q16560 246 aaKnown RBP16.89■□□□□ 0.29
SHMT2-202ENST00000414700 FRMD5Q7Z6J6 570 aa16.89■□□□□ 0.29
SHMT2-202ENST00000414700 RPAINQ86UA6 219 aa16.89■□□□□ 0.29
SHMT2-202ENST00000414700 CCDC155Q8N6L0 562 aa16.89■□□□□ 0.29
SHMT2-202ENST00000414700 CEP120Q8N960 986 aa16.89■□□□□ 0.29
SHMT2-202ENST00000414700 NOC4LQ9BVI4 516 aaKnown RBP16.89■□□□□ 0.29
SHMT2-202ENST00000414700 SLC16A3O15427 465 aaKnown RBP16.89■□□□□ 0.29
SHMT2-202ENST00000414700 FAM189A1O60320 539 aa16.89■□□□□ 0.29
SHMT2-202ENST00000414700 GNA14O95837 355 aa16.89■□□□□ 0.29
SHMT2-202ENST00000414700 TNFSF9P41273 254 aa16.89■□□□□ 0.29
SHMT2-202ENST00000414700 DLG4P78352 724 aa16.89■□□□□ 0.29
SHMT2-202ENST00000414700 PTPN14Q15678 1187 aa16.89■□□□□ 0.29
SHMT2-202ENST00000414700 TMEM132AQ24JP5 1023 aa16.89■□□□□ 0.29
SHMT2-202ENST00000414700 DCAF17Q5H9S7 520 aaPredicted RBP16.89■□□□□ 0.29
SHMT2-202ENST00000414700 CRELD2Q6UXH1 353 aaPredicted RBP16.89■□□□□ 0.29
SHMT2-202ENST00000414700 CATSPER4Q7RTX7 472 aa16.89■□□□□ 0.29
SHMT2-202ENST00000414700 RSPH3Q86UC2 560 aa16.89■□□□□ 0.29
SHMT2-202ENST00000414700 FAM126BQ8IXS8 530 aa16.89■□□□□ 0.29
SHMT2-202ENST00000414700 ANKRD20A12PQ8NF67 263 aa16.89■□□□□ 0.29
SHMT2-202ENST00000414700 PLEKHO2Q8TD55 490 aa16.89■□□□□ 0.29
SHMT2-202ENST00000414700 MRFAP1L1Q96HT8 127 aa16.89■□□□□ 0.29
SHMT2-202ENST00000414700 FBXL18Q96ME1 805 aa16.89■□□□□ 0.29
SHMT2-202ENST00000414700 MKNK1Q9BUB5 465 aa16.89■□□□□ 0.29
SHMT2-202ENST00000414700 MSTO1Q9BUK6 570 aa16.89■□□□□ 0.29
SHMT2-202ENST00000414700 PDZD7Q9H5P4 517 aa16.89■□□□□ 0.29
SHMT2-202ENST00000414700 NOC2LQ9Y3T9 749 aaKnown RBP16.89■□□□□ 0.29
SHMT2-202ENST00000414700 TULP1O00294 542 aaPredicted RBP16.88■□□□□ 0.29
SHMT2-202ENST00000414700 WNT7BP56706 349 aa16.88■□□□□ 0.29
SHMT2-202ENST00000414700 ELF2Q15723 593 aa16.88■□□□□ 0.29
SHMT2-202ENST00000414700 MAN2A1Q16706 1144 aa16.88■□□□□ 0.29
SHMT2-202ENST00000414700 ZNF568Q3ZCX4 644 aa16.88■□□□□ 0.29
SHMT2-202ENST00000414700 ZNF618Q5T7W0 954 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms