RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 A0A0B4J269 797 aa12.62□□□□□ -0.39
SNRNP35-202ENST00000412157 MBLAC1A4D2B0 266 aaPredicted RBP12.62□□□□□ -0.39
SNRNP35-202ENST00000412157 CLDN3O15551 220 aa12.62□□□□□ -0.39
SNRNP35-202ENST00000412157 ADAMTS4O75173 837 aa12.62□□□□□ -0.39
SNRNP35-202ENST00000412157 EDN1P05305 212 aa12.62□□□□□ -0.39
SNRNP35-202ENST00000412157 EN2P19622 333 aaPredicted RBP12.62□□□□□ -0.39
SNRNP35-202ENST00000412157 FECHP22830 423 aa12.62□□□□□ -0.39
SNRNP35-202ENST00000412157 MXI1P50539 228 aa12.62□□□□□ -0.39
SNRNP35-202ENST00000412157 GPC3P51654 580 aa12.62□□□□□ -0.39
SNRNP35-202ENST00000412157 NLRP11P59045 1033 aaKnown RBP12.62□□□□□ -0.39
SNRNP35-202ENST00000412157 NOLC1Q14978 699 aaKnown RBP eCLIP12.62□□□□□ -0.39
SNRNP35-202ENST00000412157 FAM187BQ17R55 369 aa12.62□□□□□ -0.39
SNRNP35-202ENST00000412157 ZNF568Q3ZCX4 644 aa12.62□□□□□ -0.39
SNRNP35-202ENST00000412157 MAP3K21Q5TCX8 1036 aa12.62□□□□□ -0.39
SNRNP35-202ENST00000412157 ATF7IP2Q5U623 682 aa12.62□□□□□ -0.39
SNRNP35-202ENST00000412157 MPZL3Q6UWV2 235 aa12.62□□□□□ -0.39
SNRNP35-202ENST00000412157 TMEM139Q8IV31 216 aa12.62□□□□□ -0.39
SNRNP35-202ENST00000412157 PCSK9Q8NBP7 692 aaKnown RBP12.62□□□□□ -0.39
SNRNP35-202ENST00000412157 ZBTB45Q96K62 511 aaPredicted RBP12.62□□□□□ -0.39
SNRNP35-202ENST00000412157 PRIMPOLQ96LW4 560 aa12.62□□□□□ -0.39
SNRNP35-202ENST00000412157 MFSD14AQ96MC6 490 aa12.62□□□□□ -0.39
SNRNP35-202ENST00000412157 FNBP1Q96RU3 617 aa12.62□□□□□ -0.39
SNRNP35-202ENST00000412157 DNAJC7Q99615 494 aa12.62□□□□□ -0.39
SNRNP35-202ENST00000412157 TMEM106CQ9BVX2 250 aa12.62□□□□□ -0.39
SNRNP35-202ENST00000412157 GCOM2Q9BZD3 368 aaPredicted RBP12.62□□□□□ -0.39
SNRNP35-202ENST00000412157 FZD8Q9H461 694 aa12.62□□□□□ -0.39
SNRNP35-202ENST00000412157 AGPAT5Q9NUQ2 364 aa12.62□□□□□ -0.39
SNRNP35-202ENST00000412157 DDX20Q9UHI6 824 aaKnown RBP12.62□□□□□ -0.39
SNRNP35-202ENST00000412157 CNTNAP2Q9UHC6 1331 aa12.62□□□□□ -0.39
SNRNP35-202ENST00000412157 OGTO15294 1046 aa12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 ERLIN2O94905 339 aa12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 MYCP01106 439 aaPredicted RBP12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 MYCNP04198 464 aaPredicted RBP12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 SLC9A1P19634 815 aa12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 PON1P27169 355 aa12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 CST5P28325 142 aaPredicted RBP12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 GTF2H1P32780 548 aa12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 POLR2FP61218 127 aaKnown RBP12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 DLG4P78352 724 aa12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 PSMD6Q15008 389 aa12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 SURF1Q15526 300 aa12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 CBWD6Q4V339 395 aa12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 CBWD3Q5JTY5 395 aa12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 CBWD5Q5RIA9 395 aa12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 PDXDC1Q6P996 788 aa12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 TSHZ1Q6ZSZ6 1077 aa12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 RRAGAQ7L523 313 aa12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 ZBTB33Q86T24 672 aa12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 KIAA0319LQ8IZA0 1049 aa12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 ZNF710Q8N1W2 664 aa12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 ZSWIM2Q8NEG5 633 aa12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 PARD3BQ8TEW8 1205 aa12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 CCDC127Q96BQ5 260 aa12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 SPAG5Q96R06 1193 aa12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 GANQ9H2C0 597 aa12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 IFT122Q9HBG6 1241 aa12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 NLRC4Q9NPP4 1024 aa12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 RRAGDQ9NQL2 400 aaPredicted RBP12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 RBAKQ9NYW8 714 aaPredicted RBP12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 HDAC6Q9UBN7 1215 aa12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 TNFSF13BQ9Y275 285 aa12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 USP20Q9Y2K6 914 aa12.61□□□□□ -0.39
SNRNP35-202ENST00000412157 PDCD11Q14690 1871 aaKnown RBP12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 LRRC53A6NM62 1247 aa12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 LRRIQ3A6PVS8 624 aaPredicted RBP12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 RNF225M0QZC1 329 aaPredicted RBP12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 EPHB6O15197 1021 aa12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 PMM2O15305 246 aa12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 INHAP05111 366 aa12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 ACTN1P12814 892 aa12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 RFX1P22670 979 aa12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 CYLC1P35663 651 aaPredicted RBP12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 GCLMP48507 274 aa12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 ACOT2P49753 483 aa12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 ADAM17P78536 824 aa12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 MCL1Q07820 350 aa12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 PPP3CAQ08209 521 aa12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 NCBP1Q09161 790 aaKnown RBP12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 RAPGEF1Q13905 1077 aa12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 FAM47CQ5HY64 1035 aa12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 KLHDC7AQ5VTJ3 777 aa12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 SFMBT2Q5VUG0 894 aa12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 KRT39Q6A163 491 aa12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 TAF2Q6P1X5 1199 aa12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 TRIM65Q6PJ69 517 aa12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 CXCL17Q6UXB2 119 aa12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 APBB1IPQ7Z5R6 666 aaPredicted RBP12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 RNF180Q86T96 592 aa12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 BRSK2Q8IWQ3 736 aa12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 C17orf53Q8N3J3 647 aaPredicted RBP12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 PPP1R13LQ8WUF5 828 aa12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 ADPGKQ9BRR6 497 aa12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 INTS2Q9H0H0 1204 aaKnown RBP12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 TMEM8AQ9HCN3 771 aa12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 HMX1Q9NP08 348 aaPredicted RBP12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 FBXL5Q9UKA1 691 aa12.6□□□□□ -0.39
SNRNP35-202ENST00000412157 SOWAHDA6NJG2 315 aa12.59□□□□□ -0.39
SNRNP35-202ENST00000412157 M0QZ92 97 aa12.59□□□□□ -0.39
SNRNP35-202ENST00000412157 TREHO43280 583 aa12.59□□□□□ -0.39
SNRNP35-202ENST00000412157 ZSCAN12O43309 604 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms