RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 RNF39Q9H2S5 420 aa15.3■□□□□ 0.04
CPNE1-206ENST00000412056 IKZF4Q9H2S9 585 aa15.3■□□□□ 0.04
CPNE1-206ENST00000412056 CERS4Q9HA82 394 aa15.3■□□□□ 0.04
CPNE1-206ENST00000412056 RSAD1Q9HA92 442 aa15.3■□□□□ 0.04
CPNE1-206ENST00000412056 PTPRHQ9HD43 1115 aa15.3■□□□□ 0.04
CPNE1-206ENST00000412056 ANKFY1Q9P2R3 1169 aa15.3■□□□□ 0.04
CPNE1-206ENST00000412056 INPP5FQ9Y2H2 1132 aa15.3■□□□□ 0.04
CPNE1-206ENST00000412056 MRPL42Q9Y6G3 142 aaKnown RBP15.3■□□□□ 0.04
CPNE1-206ENST00000412056 HNRNPDLO14979 420 aaKnown RBP15.29■□□□□ 0.04
CPNE1-206ENST00000412056 OFD1O75665 1012 aa15.29■□□□□ 0.04
CPNE1-206ENST00000412056 HARSP12081 509 aaKnown RBP15.29■□□□□ 0.04
CPNE1-206ENST00000412056 SCP2P22307 547 aa15.29■□□□□ 0.04
CPNE1-206ENST00000412056 AKAP5P24588 427 aa15.29■□□□□ 0.04
CPNE1-206ENST00000412056 LIG4P49917 911 aa15.29■□□□□ 0.04
CPNE1-206ENST00000412056 UBE2HP62256 183 aa15.29■□□□□ 0.04
CPNE1-206ENST00000412056 KCNA1Q09470 495 aa15.29■□□□□ 0.04
CPNE1-206ENST00000412056 DPYDQ12882 1025 aa15.29■□□□□ 0.04
CPNE1-206ENST00000412056 KMT5BQ4FZB7 885 aa15.29■□□□□ 0.04
CPNE1-206ENST00000412056 L1TD1Q5T7N2 865 aaKnown RBP15.29■□□□□ 0.04
CPNE1-206ENST00000412056 MPZL3Q6UWV2 235 aa15.29■□□□□ 0.04
CPNE1-206ENST00000412056 ZPBP2Q6X784 338 aa15.29■□□□□ 0.04
CPNE1-206ENST00000412056 ABI1Q8IZP0 508 aa15.29■□□□□ 0.04
CPNE1-206ENST00000412056 CEP120Q8N960 986 aa15.29■□□□□ 0.04
CPNE1-206ENST00000412056 HAPLN2Q9GZV7 340 aa15.29■□□□□ 0.04
CPNE1-206ENST00000412056 EXOC1Q9NV70 894 aa15.29■□□□□ 0.04
CPNE1-206ENST00000412056 EPOPA6NHQ4 379 aa15.28■□□□□ 0.04
CPNE1-206ENST00000412056 TISP43B9A030 160 aa15.28■□□□□ 0.04
CPNE1-206ENST00000412056 TOM1L1O75674 476 aa15.28■□□□□ 0.04
CPNE1-206ENST00000412056 PRPF6O94906 941 aaKnown RBP15.28■□□□□ 0.04
CPNE1-206ENST00000412056 RPN1P04843 607 aaKnown RBP15.28■□□□□ 0.04
CPNE1-206ENST00000412056 MYL1P05976 194 aa15.28■□□□□ 0.04
CPNE1-206ENST00000412056 ABCD1P33897 745 aa15.28■□□□□ 0.04
CPNE1-206ENST00000412056 MLH1P40692 756 aa15.28■□□□□ 0.04
CPNE1-206ENST00000412056 AFF1P51825 1210 aaKnown RBP15.28■□□□□ 0.04
CPNE1-206ENST00000412056 ALCAMQ13740 583 aa15.28■□□□□ 0.04
CPNE1-206ENST00000412056 NOLC1Q14978 699 aaKnown RBP eCLIP15.28■□□□□ 0.043e-8■□□□□ 8.2
CPNE1-206ENST00000412056 POSTNQ15063 836 aa15.28■□□□□ 0.04
CPNE1-206ENST00000412056 GLB1LQ6UWU2 654 aa15.28■□□□□ 0.04
CPNE1-206ENST00000412056 LRRC55Q6ZSA7 311 aa15.28■□□□□ 0.04
CPNE1-206ENST00000412056 APBB1IPQ7Z5R6 666 aaPredicted RBP15.28■□□□□ 0.04
CPNE1-206ENST00000412056 GBP4Q96PP9 640 aa15.28■□□□□ 0.04
CPNE1-206ENST00000412056 TGS1Q96RS0 853 aaKnown RBP15.28■□□□□ 0.04
CPNE1-206ENST00000412056 GAD1Q99259 594 aa15.28■□□□□ 0.04
CPNE1-206ENST00000412056 C17orf80Q9BSJ5 609 aa15.28■□□□□ 0.04
CPNE1-206ENST00000412056 TCHPQ9BT92 498 aa15.28■□□□□ 0.04
CPNE1-206ENST00000412056 SEMA6BQ9H3T3 888 aa15.28■□□□□ 0.04
CPNE1-206ENST00000412056 SNTG2Q9NY99 539 aa15.28■□□□□ 0.04
CPNE1-206ENST00000412056 KLK14Q9P0G3 267 aa15.28■□□□□ 0.04
CPNE1-206ENST00000412056 PARP2Q9UGN5 583 aa15.28■□□□□ 0.04
CPNE1-206ENST00000412056 MTUS1Q9ULD2 1270 aa15.28■□□□□ 0.04
CPNE1-206ENST00000412056 GDAQ9Y2T3 454 aa15.28■□□□□ 0.04
CPNE1-206ENST00000412056 ANKRD63C9JTQ0 380 aa15.27■□□□□ 0.04
CPNE1-206ENST00000412056 RECQL4O94761 1208 aa15.27■□□□□ 0.04
CPNE1-206ENST00000412056 MCF2P10911 925 aa15.27■□□□□ 0.04
CPNE1-206ENST00000412056 MATR3P43243 847 aaKnown RBP eCLIP15.27■□□□□ 0.04
CPNE1-206ENST00000412056 ERVK-21P61565 698 aa15.27■□□□□ 0.04
CPNE1-206ENST00000412056 PNOCQ13519 176 aa15.27■□□□□ 0.04
CPNE1-206ENST00000412056 NOMO2Q5JPE7 1267 aa15.27■□□□□ 0.04
CPNE1-206ENST00000412056 KANK3Q6NY19 840 aa15.27■□□□□ 0.04
CPNE1-206ENST00000412056 TMEM192Q8IY95 271 aa15.27■□□□□ 0.04
CPNE1-206ENST00000412056 THNSL1Q8IYQ7 743 aa15.27■□□□□ 0.04
CPNE1-206ENST00000412056 HACE1Q8IYU2 909 aa15.27■□□□□ 0.04
CPNE1-206ENST00000412056 LRRC43Q8N309 656 aa15.27■□□□□ 0.04
CPNE1-206ENST00000412056 DEFB123Q8N688 67 aa15.27■□□□□ 0.04
CPNE1-206ENST00000412056 ARNTL2Q8WYA1 636 aa15.27■□□□□ 0.04
CPNE1-206ENST00000412056 ERCC4Q92889 916 aaPredicted RBP15.27■□□□□ 0.04
CPNE1-206ENST00000412056 CCDC34Q96HJ3 373 aa15.27■□□□□ 0.04
CPNE1-206ENST00000412056 ZFP42Q96MM3 310 aa15.27■□□□□ 0.04
CPNE1-206ENST00000412056 TIGD1Q96MW7 591 aa15.27■□□□□ 0.04
CPNE1-206ENST00000412056 ACCSQ96QU6 501 aa15.27■□□□□ 0.04
CPNE1-206ENST00000412056 CWH43Q9H720 699 aa15.27■□□□□ 0.04
CPNE1-206ENST00000412056 SLC39A2Q9NP94 309 aa15.27■□□□□ 0.04
CPNE1-206ENST00000412056 TYW1Q9NV66 732 aaKnown RBP15.27■□□□□ 0.04
CPNE1-206ENST00000412056 GIT1Q9Y2X7 761 aa15.27■□□□□ 0.04
CPNE1-206ENST00000412056 PCDHB13Q9Y5F0 798 aa15.27■□□□□ 0.04
CPNE1-206ENST00000412056 ZMYM2Q9UBW7 1377 aa15.26■□□□□ 0.03
CPNE1-206ENST00000412056 ARL5CA6NH57 179 aa15.26■□□□□ 0.03
CPNE1-206ENST00000412056 INPPL1O15357 1258 aa15.26■□□□□ 0.03
CPNE1-206ENST00000412056 EIF3DO15371 548 aaKnown RBP eCLIP15.26■□□□□ 0.03
CPNE1-206ENST00000412056 CLDN3O15551 220 aa15.26■□□□□ 0.03
CPNE1-206ENST00000412056 KINO60870 393 aaKnown RBP15.26■□□□□ 0.03
CPNE1-206ENST00000412056 CTNNB1P35222 781 aa15.26■□□□□ 0.03
CPNE1-206ENST00000412056 GRM5P41594 1212 aa15.26■□□□□ 0.03
CPNE1-206ENST00000412056 OSTNP61366 133 aa15.26■□□□□ 0.03
CPNE1-206ENST00000412056 MCL1Q07820 350 aa15.26■□□□□ 0.03
CPNE1-206ENST00000412056 GRIN2CQ14957 1233 aa15.26■□□□□ 0.03
CPNE1-206ENST00000412056 SEZ6Q53EL9 994 aa15.26■□□□□ 0.03
CPNE1-206ENST00000412056 SPOUT1Q5T280 376 aaKnown RBP15.26■□□□□ 0.03
CPNE1-206ENST00000412056 STXBP4Q6ZWJ1 553 aa15.26■□□□□ 0.03
CPNE1-206ENST00000412056 EPM2AIP1Q7L775 607 aaPredicted RBP15.26■□□□□ 0.03
CPNE1-206ENST00000412056 KIAA0895Q8NCT3 520 aa15.26■□□□□ 0.03
CPNE1-206ENST00000412056 URGCPQ8TCY9 931 aa15.26■□□□□ 0.03
CPNE1-206ENST00000412056 CLP1Q92989 425 aaKnown RBP15.26■□□□□ 0.03
CPNE1-206ENST00000412056 MRPL9Q9BYD2 267 aaKnown RBP15.26■□□□□ 0.03
CPNE1-206ENST00000412056 CXCL16Q9H2A7 254 aa15.26■□□□□ 0.03
CPNE1-206ENST00000412056 UBN1Q9NPG3 1134 aa15.26■□□□□ 0.03
CPNE1-206ENST00000412056 LMBRD1Q9NUN5 540 aa15.26■□□□□ 0.03
CPNE1-206ENST00000412056 TBC1D13Q9NVG8 400 aa15.26■□□□□ 0.03
CPNE1-206ENST00000412056 MIOSQ9NXC5 875 aa15.26■□□□□ 0.03
CPNE1-206ENST00000412056 EXOC7Q9UPT5 735 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms