RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 MECP2P51608 486 aaKnown RBP3.58□□□□□ -1.84
HMGB3P2-201ENST00000411913 APBA1Q02410 837 aa3.58□□□□□ -1.84
HMGB3P2-201ENST00000411913 CCDC144BQ3MJ40 725 aa3.58□□□□□ -1.84
HMGB3P2-201ENST00000411913 SPDYE7PQ495Y7 208 aa3.58□□□□□ -1.84
HMGB3P2-201ENST00000411913 KRTAP5-11Q6L8G4 156 aa3.58□□□□□ -1.84
HMGB3P2-201ENST00000411913 ARMC6Q6NXE6 501 aa3.58□□□□□ -1.84
HMGB3P2-201ENST00000411913 C1QL2Q7Z5L3 287 aa3.58□□□□□ -1.84
HMGB3P2-201ENST00000411913 FGD2Q7Z6J4 655 aa3.58□□□□□ -1.84
HMGB3P2-201ENST00000411913 CHST14Q8NCH0 376 aa3.58□□□□□ -1.84
HMGB3P2-201ENST00000411913 PMFBP1Q8TBY8 1022 aa3.58□□□□□ -1.84
HMGB3P2-201ENST00000411913 FERMT2Q96AC1 680 aa3.58□□□□□ -1.84
HMGB3P2-201ENST00000411913 Q96MF0 132 aa3.58□□□□□ -1.84
HMGB3P2-201ENST00000411913 ALOXE3Q9BYJ1 711 aa3.58□□□□□ -1.84
HMGB3P2-201ENST00000411913 POFUT1Q9H488 388 aa3.58□□□□□ -1.84
HMGB3P2-201ENST00000411913 CABP5Q9NP86 173 aa3.58□□□□□ -1.84
HMGB3P2-201ENST00000411913 LRIT1Q9P2V4 623 aa3.58□□□□□ -1.84
HMGB3P2-201ENST00000411913 TTBK1Q5TCY1 1321 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P2-201ENST00000411913 WDR91A4D1P6 747 aa3.57□□□□□ -1.84
HMGB3P2-201ENST00000411913 LY86O95711 162 aa3.57□□□□□ -1.84
HMGB3P2-201ENST00000411913 SLC9A1P19634 815 aa3.57□□□□□ -1.84
HMGB3P2-201ENST00000411913 POU3F3P20264 500 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P2-201ENST00000411913 POLR2AP24928 1970 aaKnown RBP3.57□□□□□ -1.84
HMGB3P2-201ENST00000411913 CACNA2D1P54289 1103 aa3.57□□□□□ -1.84
HMGB3P2-201ENST00000411913 SERINC3Q13530 473 aa3.57□□□□□ -1.84
HMGB3P2-201ENST00000411913 Q6ZNX1 250 aa3.57□□□□□ -1.84
HMGB3P2-201ENST00000411913 TAS1R1Q7RTX1 841 aa3.57□□□□□ -1.84
HMGB3P2-201ENST00000411913 PPP1R14CQ8TAE6 165 aa3.57□□□□□ -1.84
HMGB3P2-201ENST00000411913 TFAP2CQ92754 450 aa3.57□□□□□ -1.84
HMGB3P2-201ENST00000411913 MKL1Q969V6 931 aa3.57□□□□□ -1.84
HMGB3P2-201ENST00000411913 CDC5LQ99459 802 aaKnown RBP3.57□□□□□ -1.84
HMGB3P2-201ENST00000411913 MTFR1LQ9H019 292 aa3.57□□□□□ -1.84
HMGB3P2-201ENST00000411913 OSBPL2Q9H1P3 480 aa3.57□□□□□ -1.84
HMGB3P2-201ENST00000411913 SAMD15Q9P1V8 674 aa3.57□□□□□ -1.84
HMGB3P2-201ENST00000411913 SIRPGQ9P1W8 387 aa3.57□□□□□ -1.84
HMGB3P2-201ENST00000411913 CADPSQ9ULU8 1353 aa3.56□□□□□ -1.84
HMGB3P2-201ENST00000411913 MYPNQ86TC9 1320 aa3.56□□□□□ -1.84
HMGB3P2-201ENST00000411913 B4E1Z4 1266 aa3.56□□□□□ -1.84
HMGB3P2-201ENST00000411913 B5MCH6 92 aa3.56□□□□□ -1.84
HMGB3P2-201ENST00000411913 PROP1O75360 226 aa3.56□□□□□ -1.84
HMGB3P2-201ENST00000411913 C1QL1O75973 258 aa3.56□□□□□ -1.84
HMGB3P2-201ENST00000411913 GLRX3O76003 335 aaKnown RBP3.56□□□□□ -1.84
HMGB3P2-201ENST00000411913 ONECUT2O95948 504 aa3.56□□□□□ -1.84
HMGB3P2-201ENST00000411913 XPAP23025 273 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P2-201ENST00000411913 CANXP27824 592 aaKnown RBP3.56□□□□□ -1.84
HMGB3P2-201ENST00000411913 MRPS35P82673 323 aaKnown RBP3.56□□□□□ -1.84
HMGB3P2-201ENST00000411913 NFE2L2Q16236 605 aa3.56□□□□□ -1.84
HMGB3P2-201ENST00000411913 AKNAD1Q5T1N1 836 aa3.56□□□□□ -1.84
HMGB3P2-201ENST00000411913 FAM102AQ5T9C2 384 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P2-201ENST00000411913 GIMAP6Q6P9H5 292 aa3.56□□□□□ -1.84
HMGB3P2-201ENST00000411913 BTNL9Q6UXG8 535 aa3.56□□□□□ -1.84
HMGB3P2-201ENST00000411913 GRASPQ7Z6J2 395 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P2-201ENST00000411913 GPR149Q86SP6 731 aa3.56□□□□□ -1.84
HMGB3P2-201ENST00000411913 SH2D3CQ8N5H7 860 aa3.56□□□□□ -1.84
HMGB3P2-201ENST00000411913 RNF169Q8NCN4 708 aa3.56□□□□□ -1.84
HMGB3P2-201ENST00000411913 PHACTR3Q96KR7 559 aa3.56□□□□□ -1.84
HMGB3P2-201ENST00000411913 MRPL4Q9BYD3 311 aaKnown RBP3.56□□□□□ -1.84
HMGB3P2-201ENST00000411913 KLK15Q9H2R5 256 aa3.56□□□□□ -1.84
HMGB3P2-201ENST00000411913 ZSWIM4Q9H7M6 989 aa3.56□□□□□ -1.84
HMGB3P2-201ENST00000411913 CASS4Q9NQ75 786 aa3.56□□□□□ -1.84
HMGB3P2-201ENST00000411913 SLC17A6Q9P2U8 582 aa3.56□□□□□ -1.84
HMGB3P2-201ENST00000411913 USP18Q9UMW8 372 aa3.56□□□□□ -1.84
HMGB3P2-201ENST00000411913 ATP11BQ9Y2G3 1177 aa3.56□□□□□ -1.84
HMGB3P2-201ENST00000411913 PCDHB6Q9Y5E3 794 aa3.56□□□□□ -1.84
HMGB3P2-201ENST00000411913 NOX1Q9Y5S8 564 aa3.56□□□□□ -1.84
HMGB3P2-201ENST00000411913 MARCH11A6NNE9 402 aa3.55□□□□□ -1.84
HMGB3P2-201ENST00000411913 TBKBP1A7MCY6 615 aa3.55□□□□□ -1.84
HMGB3P2-201ENST00000411913 MGST3O14880 152 aa3.55□□□□□ -1.84
HMGB3P2-201ENST00000411913 CFIP05156 583 aa3.55□□□□□ -1.84
HMGB3P2-201ENST00000411913 KRTAP10-6P60371 365 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P2-201ENST00000411913 ANKS6Q68DC2 871 aa3.55□□□□□ -1.84
HMGB3P2-201ENST00000411913 ZNF425Q6IV72 752 aa3.55□□□□□ -1.84
HMGB3P2-201ENST00000411913 ZCCHC8Q6NZY4 707 aaKnown RBP3.55□□□□□ -1.84
HMGB3P2-201ENST00000411913 LMBR1LQ6UX01 489 aa3.55□□□□□ -1.84
HMGB3P2-201ENST00000411913 MSL3Q8N5Y2 521 aaKnown RBP3.55□□□□□ -1.84
HMGB3P2-201ENST00000411913 CDYL2Q8N8U2 506 aa3.55□□□□□ -1.84
HMGB3P2-201ENST00000411913 RTF1Q92541 710 aaKnown RBP3.55□□□□□ -1.84
HMGB3P2-201ENST00000411913 ELF4Q99607 663 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P2-201ENST00000411913 HEPHQ9BQS7 1158 aa3.55□□□□□ -1.84
HMGB3P2-201ENST00000411913 PIF1Q9H611 641 aa3.55□□□□□ -1.84
HMGB3P2-201ENST00000411913 TOMM22Q9NS69 142 aa3.55□□□□□ -1.84
HMGB3P2-201ENST00000411913 TBCCD1Q9NVR7 557 aa3.55□□□□□ -1.84
HMGB3P2-201ENST00000411913 ZNF70Q9UC06 446 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P2-201ENST00000411913 ZMYM3Q14202 1370 aa3.54□□□□□ -1.84
HMGB3P2-201ENST00000411913 ST20-MTHFSA0A0A6YYL1 179 aa3.54□□□□□ -1.84
HMGB3P2-201ENST00000411913 TLDC2A0PJX2 215 aa3.54□□□□□ -1.84
HMGB3P2-201ENST00000411913 CGB1A6NKQ9 187 aa3.54□□□□□ -1.84
HMGB3P2-201ENST00000411913 KCNQ2O43526 872 aa3.54□□□□□ -1.84
HMGB3P2-201ENST00000411913 NRP2O60462 931 aa3.54□□□□□ -1.84
HMGB3P2-201ENST00000411913 SRSF7Q16629 238 aaKnown RBP eCLIP3.54□□□□□ -1.84
HMGB3P2-201ENST00000411913 ESRP1Q6NXG1 681 aaKnown RBP3.54□□□□□ -1.84
HMGB3P2-201ENST00000411913 ZNF788Q6ZQV5 615 aa3.54□□□□□ -1.84
HMGB3P2-201ENST00000411913 ZZZ3Q8IYH5 903 aa3.54□□□□□ -1.84
HMGB3P2-201ENST00000411913 FAM177A1Q8N128 213 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P2-201ENST00000411913 ZFP28Q8NHY6 868 aa3.54□□□□□ -1.84
HMGB3P2-201ENST00000411913 ACTRT2Q8TDY3 377 aa3.54□□□□□ -1.84
HMGB3P2-201ENST00000411913 TRIM39Q9HCM9 518 aa3.54□□□□□ -1.84
HMGB3P2-201ENST00000411913 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.54□□□□□ -1.84
HMGB3P2-201ENST00000411913 ASB6Q9NWX5 421 aa3.54□□□□□ -1.84
HMGB3P2-201ENST00000411913 FOXJ2Q9P0K8 574 aa3.54□□□□□ -1.84
HMGB3P2-201ENST00000411913 CDK11AQ9UQ88 783 aaPredicted RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms