RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 SSBP05455 408 aaKnown RBP eCLIP16.06■□□□□ 0.16
MCF2L-210ENST00000409954 CENPBP07199 599 aaPredicted RBP16.06■□□□□ 0.16
MCF2L-210ENST00000409954 ADH1AP07327 375 aa16.06■□□□□ 0.16
MCF2L-210ENST00000409954 SCNN1GP51170 649 aa16.06■□□□□ 0.16
MCF2L-210ENST00000409954 MAPK6Q16659 721 aa16.06■□□□□ 0.16
MCF2L-210ENST00000409954 PADI6Q6TGC4 694 aa16.06■□□□□ 0.16
MCF2L-210ENST00000409954 C15orf39Q6ZRI6 1047 aa16.06■□□□□ 0.16
MCF2L-210ENST00000409954 ACSF2Q96CM8 615 aaPredicted RBP16.06■□□□□ 0.16
MCF2L-210ENST00000409954 HERC2P3Q9BVR0 1158 aa16.06■□□□□ 0.16
MCF2L-210ENST00000409954 APOL6Q9BWW8 343 aa16.06■□□□□ 0.16
MCF2L-210ENST00000409954 RAB34Q9BZG1 259 aa16.06■□□□□ 0.16
MCF2L-210ENST00000409954 RXFP1Q9HBX9 757 aa16.06■□□□□ 0.16
MCF2L-210ENST00000409954 GPRC5CQ9NQ84 441 aa16.06■□□□□ 0.16
MCF2L-210ENST00000409954 CHST7Q9NS84 486 aa16.06■□□□□ 0.16
MCF2L-210ENST00000409954 PARP2Q9UGN5 583 aa16.06■□□□□ 0.16
MCF2L-210ENST00000409954 PRG3Q9Y2Y8 225 aaPredicted RBP16.06■□□□□ 0.16
MCF2L-210ENST00000409954 C2CD4DB7Z1M9 353 aa16.05■□□□□ 0.16
MCF2L-210ENST00000409954 ACKR2O00590 384 aa16.05■□□□□ 0.16
MCF2L-210ENST00000409954 N4BP3O15049 544 aa16.05■□□□□ 0.16
MCF2L-210ENST00000409954 B4GALT5O43286 388 aa16.05■□□□□ 0.16
MCF2L-210ENST00000409954 NPTXRO95502 500 aa16.05■□□□□ 0.16
MCF2L-210ENST00000409954 AKAP5P24588 427 aa16.05■□□□□ 0.16
MCF2L-210ENST00000409954 U2AF2P26368 475 aaKnown RBP eCLIP16.05■□□□□ 0.16
MCF2L-210ENST00000409954 NAMPTP43490 491 aa16.05■□□□□ 0.16
MCF2L-210ENST00000409954 FXR2P51116 673 aaKnown RBP eCLIP16.05■□□□□ 0.16
MCF2L-210ENST00000409954 DSG1Q02413 1049 aa16.05■□□□□ 0.16
MCF2L-210ENST00000409954 USP41Q3LFD5 358 aa16.05■□□□□ 0.16
MCF2L-210ENST00000409954 CDCA2Q69YH5 1023 aaPredicted RBP16.05■□□□□ 0.16
MCF2L-210ENST00000409954 TMC5Q6UXY8 1006 aa16.05■□□□□ 0.16
MCF2L-210ENST00000409954 OTOP3Q7RTS5 596 aa16.05■□□□□ 0.16
MCF2L-210ENST00000409954 TAS1R1Q7RTX1 841 aa16.05■□□□□ 0.16
MCF2L-210ENST00000409954 RNF168Q8IYW5 571 aaPredicted RBP16.05■□□□□ 0.16
MCF2L-210ENST00000409954 C4orf32Q8N8J7 132 aa16.05■□□□□ 0.16
MCF2L-210ENST00000409954 KREMEN2Q8NCW0 462 aa16.05■□□□□ 0.16
MCF2L-210ENST00000409954 GSTCDQ8NEC7 633 aa16.05■□□□□ 0.16
MCF2L-210ENST00000409954 CMASQ8NFW8 434 aaPredicted RBP16.05■□□□□ 0.16
MCF2L-210ENST00000409954 ASIC4Q96FT7 647 aa16.05■□□□□ 0.16
MCF2L-210ENST00000409954 IFT74Q96LB3 600 aa16.05■□□□□ 0.16
MCF2L-210ENST00000409954 ZFP42Q96MM3 310 aa16.05■□□□□ 0.16
MCF2L-210ENST00000409954 RHOBTB2Q9BYZ6 727 aa16.05■□□□□ 0.16
MCF2L-210ENST00000409954 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.05■□□□□ 0.16
MCF2L-210ENST00000409954 MARCH5Q9NX47 278 aa16.05■□□□□ 0.16
MCF2L-210ENST00000409954 LRWD1Q9UFC0 647 aa16.05■□□□□ 0.16
MCF2L-210ENST00000409954 KIF3AQ9Y496 699 aa16.05■□□□□ 0.16
MCF2L-210ENST00000409954 LAD1O00515 517 aa16.04■□□□□ 0.16
MCF2L-210ENST00000409954 C2CD2LO14523 706 aa16.04■□□□□ 0.16
MCF2L-210ENST00000409954 TADA2AO75478 443 aa16.04■□□□□ 0.16
MCF2L-210ENST00000409954 CCT6AP40227 531 aaKnown RBP16.04■□□□□ 0.16
MCF2L-210ENST00000409954 GLUD2P49448 558 aa16.04■□□□□ 0.16
MCF2L-210ENST00000409954 EFNA5P52803 228 aa16.04■□□□□ 0.16
MCF2L-210ENST00000409954 NUBP1P53384 320 aa16.04■□□□□ 0.16
MCF2L-210ENST00000409954 NHLH1Q02575 133 aa16.04■□□□□ 0.16
MCF2L-210ENST00000409954 GRIK3Q13003 919 aa16.04■□□□□ 0.16
MCF2L-210ENST00000409954 PRPF4BQ13523 1007 aaKnown RBP16.04■□□□□ 0.16
MCF2L-210ENST00000409954 MTMR3Q13615 1198 aa16.04■□□□□ 0.16
MCF2L-210ENST00000409954 KANK3Q6NY19 840 aa16.04■□□□□ 0.16
MCF2L-210ENST00000409954 TDRD5Q8NAT2 981 aaKnown RBP16.04■□□□□ 0.16
MCF2L-210ENST00000409954 DEPTORQ8TB45 409 aa16.04■□□□□ 0.16
MCF2L-210ENST00000409954 KIFAP3Q92845 792 aa16.04■□□□□ 0.16
MCF2L-210ENST00000409954 KIF2CQ99661 725 aa16.04■□□□□ 0.16
MCF2L-210ENST00000409954 ADPGKQ9BRR6 497 aa16.04■□□□□ 0.16
MCF2L-210ENST00000409954 IRF2BPLQ9H1B7 796 aa16.04■□□□□ 0.16
MCF2L-210ENST00000409954 NXF3Q9H4D5 531 aaKnown RBP16.04■□□□□ 0.16
MCF2L-210ENST00000409954 PLEKHA4Q9H4M7 779 aa16.04■□□□□ 0.16
MCF2L-210ENST00000409954 FNIP2Q9P278 1114 aa16.04■□□□□ 0.16
MCF2L-210ENST00000409954 LIMD1Q9UGP4 676 aa16.04■□□□□ 0.16
MCF2L-210ENST00000409954 TEX28O15482 410 aa16.03■□□□□ 0.16
MCF2L-210ENST00000409954 WEE2P0C1S8 567 aa16.03■□□□□ 0.16
MCF2L-210ENST00000409954 SP100P23497 879 aaPredicted RBP16.03■□□□□ 0.16
MCF2L-210ENST00000409954 AVPR2P30518 371 aa16.03■□□□□ 0.16
MCF2L-210ENST00000409954 CREMQ03060 361 aa16.03■□□□□ 0.16
MCF2L-210ENST00000409954 TMEM132AQ24JP5 1023 aa16.03■□□□□ 0.16
MCF2L-210ENST00000409954 POTEGQ6S5H5 508 aa16.03■□□□□ 0.16
MCF2L-210ENST00000409954 APBB1IPQ7Z5R6 666 aaPredicted RBP16.03■□□□□ 0.16
MCF2L-210ENST00000409954 CDR2LQ86X02 465 aaPredicted RBP16.03■□□□□ 0.16
MCF2L-210ENST00000409954 KCNG1Q9UIX4 513 aa16.03■□□□□ 0.16
MCF2L-210ENST00000409954 CDH22Q9UJ99 828 aa16.03■□□□□ 0.16
MCF2L-210ENST00000409954 ADAM28Q9UKQ2 775 aa16.03■□□□□ 0.16
MCF2L-210ENST00000409954 KIAA1024Q9UPX6 916 aa16.03■□□□□ 0.16
MCF2L-210ENST00000409954 DNM3Q9UQ16 869 aa16.03■□□□□ 0.16
MCF2L-210ENST00000409954 TECTAO75443 2155 aa16.02■□□□□ 0.16
MCF2L-210ENST00000409954 MUC6Q6W4X9 2439 aa16.02■□□□□ 0.16
MCF2L-210ENST00000409954 CCDC195A0A1B0GUA6 201 aa16.02■□□□□ 0.16
MCF2L-210ENST00000409954 GLUD1P00367 558 aa16.02■□□□□ 0.16
MCF2L-210ENST00000409954 THP07101 528 aa16.02■□□□□ 0.16
MCF2L-210ENST00000409954 PTPN5P54829 565 aa16.02■□□□□ 0.16
MCF2L-210ENST00000409954 PTGDRQ13258 359 aa16.02■□□□□ 0.16
MCF2L-210ENST00000409954 TUSC3Q13454 348 aa16.02■□□□□ 0.16
MCF2L-210ENST00000409954 FUT10Q6P4F1 479 aa16.02■□□□□ 0.16
MCF2L-210ENST00000409954 CCDC149Q6ZUS6 474 aa16.02■□□□□ 0.16
MCF2L-210ENST00000409954 ALYREFQ86V81 257 aaKnown RBP16.02■□□□□ 0.16
MCF2L-210ENST00000409954 KCTD17Q8N5Z5 321 aa16.02■□□□□ 0.16
MCF2L-210ENST00000409954 IGSF22Q8N9C0 903 aa16.02■□□□□ 0.16
MCF2L-210ENST00000409954 KLK14Q9P0G3 267 aa16.02■□□□□ 0.16
MCF2L-210ENST00000409954 K7ERI5 159 aa16.01■□□□□ 0.15
MCF2L-210ENST00000409954 PRKCBP05771 671 aa16.01■□□□□ 0.15
MCF2L-210ENST00000409954 HSP90AA2PQ14568 343 aaPredicted RBP16.01■□□□□ 0.15
MCF2L-210ENST00000409954 KRT79Q5XKE5 535 aa16.01■□□□□ 0.15
MCF2L-210ENST00000409954 STAMQ92783 540 aa16.01■□□□□ 0.15
MCF2L-210ENST00000409954 GPR62Q9BZJ7 368 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms