RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 TOM1L1O75674 476 aa11.96□□□□□ -0.49
CHMP3-205ENST00000409810 PFKFB1P16118 471 aa11.96□□□□□ -0.49
CHMP3-205ENST00000409810 MLH1P40692 756 aa11.96□□□□□ -0.49
CHMP3-205ENST00000409810 MATR3P43243 847 aaKnown RBP eCLIP11.96□□□□□ -0.49
CHMP3-205ENST00000409810 SYKP43405 635 aa11.96□□□□□ -0.49
CHMP3-205ENST00000409810 ALDH7A1P49419 539 aaKnown RBP11.96□□□□□ -0.49
CHMP3-205ENST00000409810 LIG4P49917 911 aa11.96□□□□□ -0.49
CHMP3-205ENST00000409810 ASIC1P78348 528 aa11.96□□□□□ -0.49
CHMP3-205ENST00000409810 UBE3AQ05086 875 aa11.96□□□□□ -0.49
CHMP3-205ENST00000409810 ADGRE1Q14246 886 aa11.96□□□□□ -0.49
CHMP3-205ENST00000409810 TIGD5Q53EQ6 642 aa11.96□□□□□ -0.49
CHMP3-205ENST00000409810 MPZL3Q6UWV2 235 aa11.96□□□□□ -0.49
CHMP3-205ENST00000409810 STXBP4Q6ZWJ1 553 aa11.96□□□□□ -0.49
CHMP3-205ENST00000409810 TAS1R3Q7RTX0 852 aa11.96□□□□□ -0.49
CHMP3-205ENST00000409810 SFR1Q86XK3 245 aa11.96□□□□□ -0.49
CHMP3-205ENST00000409810 THNSL1Q8IYQ7 743 aa11.96□□□□□ -0.49
CHMP3-205ENST00000409810 MRPS27Q92552 414 aaKnown RBP11.96□□□□□ -0.49
CHMP3-205ENST00000409810 HVCN1Q96D96 273 aa11.96□□□□□ -0.49
CHMP3-205ENST00000409810 DNAJC19Q96DA6 116 aa11.96□□□□□ -0.49
CHMP3-205ENST00000409810 GAD1Q99259 594 aa11.96□□□□□ -0.49
CHMP3-205ENST00000409810 TCHPQ9BT92 498 aa11.96□□□□□ -0.49
CHMP3-205ENST00000409810 CCDC94Q9BW85 323 aaPredicted RBP11.96□□□□□ -0.49
CHMP3-205ENST00000409810 TARS2Q9BW92 718 aaKnown RBP11.96□□□□□ -0.49
CHMP3-205ENST00000409810 ST6GALNAC4Q9H4F1 302 aa11.96□□□□□ -0.49
CHMP3-205ENST00000409810 MRPL44Q9H9J2 332 aaKnown RBP11.96□□□□□ -0.49
CHMP3-205ENST00000409810 OLFML3Q9NRN5 406 aa11.96□□□□□ -0.49
CHMP3-205ENST00000409810 PANK4Q9NVE7 773 aa11.96□□□□□ -0.49
CHMP3-205ENST00000409810 TBC1D13Q9NVG8 400 aa11.96□□□□□ -0.49
CHMP3-205ENST00000409810 CHMP5Q9NZZ3 219 aa11.96□□□□□ -0.49
CHMP3-205ENST00000409810 TBX20Q9UMR3 447 aa11.96□□□□□ -0.49
CHMP3-205ENST00000409810 HES2Q9Y543 173 aa11.96□□□□□ -0.49
CHMP3-205ENST00000409810 EYSQ5T1H1 3165 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 A0A1B0GVL5 298 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 FRMD3A2A2Y4 597 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 ARL5CA6NH57 179 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 TTLL13PA6NNM8 815 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 MEIS3P2A8K0S8 358 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 HNRNPDLO14979 420 aaKnown RBP11.95□□□□□ -0.5
CHMP3-205ENST00000409810 ZC3H11AO75152 810 aaKnown RBP eCLIP11.95□□□□□ -0.5
CHMP3-205ENST00000409810 NR1I2O75469 434 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 RECQL4O94761 1208 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 EDN1P05305 212 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 MCF2P10911 925 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 YARSP54577 528 aaKnown RBP11.95□□□□□ -0.5
CHMP3-205ENST00000409810 GTF2BQ00403 316 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 KRT17Q04695 432 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 GRIK3Q13003 919 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 COASYQ13057 564 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 NOLC1Q14978 699 aaKnown RBP eCLIP11.95□□□□□ -0.5
CHMP3-205ENST00000409810 HERC4Q5GLZ8 1057 aaPredicted RBP11.95□□□□□ -0.5
CHMP3-205ENST00000409810 EEF1DP3Q658K8 133 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 KCNT2Q6UVM3 1135 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 LRRC55Q6ZSA7 311 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 MICALL1Q8N3F8 863 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 FSIP1Q8NA03 581 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 KLHL23Q8NBE8 558 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 MRPL38Q96DV4 380 aaKnown RBP11.95□□□□□ -0.5
CHMP3-205ENST00000409810 CHAMP1Q96JM3 812 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 FIZ1Q96SL8 496 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 C7orf25Q9BPX7 421 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 TMEM175Q9BSA9 504 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 TRIM9Q9C026 710 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 CDT1Q9H211 546 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 GDPD2Q9HCC8 539 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 TOPORSQ9NS56 1045 aaPredicted RBP11.95□□□□□ -0.5
CHMP3-205ENST00000409810 ANKFY1Q9P2R3 1169 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 PUF60Q9UHX1 559 aaKnown RBP11.95□□□□□ -0.5
CHMP3-205ENST00000409810 EXOC7Q9UPT5 735 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 USP20Q9Y2K6 914 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 PCDHB13Q9Y5F0 798 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 MTCH2Q9Y6C9 303 aa11.95□□□□□ -0.5
CHMP3-205ENST00000409810 FAM237AA0A1B0GTK4 181 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 CLDN3O15551 220 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 FGF18O76093 207 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 GCNT3O95395 438 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 POMCP01189 267 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 PIGRP01833 764 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 ITGB1P05556 798 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 MYL1P05976 194 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 SLFN14P0C7P3 912 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 PROZP22891 400 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 AKAP5P24588 427 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 NMT1P30419 496 aaKnown RBP11.94□□□□□ -0.5
CHMP3-205ENST00000409810 GRM5P41594 1212 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 BCAR1P56945 870 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 PLCB3Q01970 1234 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 BMS1Q14692 1282 aaKnown RBP11.94□□□□□ -0.5
CHMP3-205ENST00000409810 KYAT1Q16773 422 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 CNNM4Q6P4Q7 775 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 UNC13DQ70J99 1090 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 ZNF720Q7Z2F6 126 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 MAP4K3Q8IVH8 894 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 STAMQ92783 540 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 PPP2R3CQ969Q6 453 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 TMEM169Q96HH4 297 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 ACAP3Q96P50 834 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 GBP3Q9H0R5 595 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 RNF39Q9H2S5 420 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 NRDE2Q9H7Z3 1164 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 PTPRHQ9HD43 1115 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms