RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 GRIK3Q13003 919 aa16.31■□□□□ 0.2
CBX3-203ENST00000409747 PPP2R5AQ15172 486 aa16.31■□□□□ 0.2
CBX3-203ENST00000409747 TMEM132AQ24JP5 1023 aa16.31■□□□□ 0.2
CBX3-203ENST00000409747 PADI6Q6TGC4 694 aa16.31■□□□□ 0.2
CBX3-203ENST00000409747 TDRD5Q8NAT2 981 aaKnown RBP16.31■□□□□ 0.2
CBX3-203ENST00000409747 ZFP42Q96MM3 310 aa16.31■□□□□ 0.2
CBX3-203ENST00000409747 RPS6KC1Q96S38 1066 aa16.31■□□□□ 0.2
CBX3-203ENST00000409747 COLEC11Q9BWP8 271 aa16.31■□□□□ 0.2
CBX3-203ENST00000409747 USTQ9Y2C2 406 aa16.31■□□□□ 0.2
CBX3-203ENST00000409747 WDFY4Q6ZS81 3184 aa16.31■□□□□ 0.2
CBX3-203ENST00000409747 N4BP3O15049 544 aa16.31■□□□□ 0.2
CBX3-203ENST00000409747 LILRB3O75022 631 aa16.31■□□□□ 0.2
CBX3-203ENST00000409747 CYP11B2P19099 503 aa16.31■□□□□ 0.2
CBX3-203ENST00000409747 NAMPTP43490 491 aa16.31■□□□□ 0.2
CBX3-203ENST00000409747 GLUD2P49448 558 aa16.31■□□□□ 0.2
CBX3-203ENST00000409747 MAPK6Q16659 721 aa16.31■□□□□ 0.2
CBX3-203ENST00000409747 PLCD3Q8N3E9 789 aa16.31■□□□□ 0.2
CBX3-203ENST00000409747 C12orf76Q8N812 135 aaPredicted RBP16.31■□□□□ 0.2
CBX3-203ENST00000409747 DEPTORQ8TB45 409 aa16.31■□□□□ 0.2
CBX3-203ENST00000409747 PRRX2Q99811 253 aa16.31■□□□□ 0.2
CBX3-203ENST00000409747 FZD8Q9H461 694 aa16.31■□□□□ 0.2
CBX3-203ENST00000409747 CDH22Q9UJ99 828 aa16.31■□□□□ 0.2
CBX3-203ENST00000409747 MUC6Q6W4X9 2439 aa16.3■□□□□ 0.2
CBX3-203ENST00000409747 C2CD4DB7Z1M9 353 aa16.3■□□□□ 0.2
CBX3-203ENST00000409747 C2CD2LO14523 706 aa16.3■□□□□ 0.2
CBX3-203ENST00000409747 AKAP5P24588 427 aa16.3■□□□□ 0.2
CBX3-203ENST00000409747 CCT6AP40227 531 aaKnown RBP16.3■□□□□ 0.2
CBX3-203ENST00000409747 PRPF4BQ13523 1007 aaKnown RBP16.3■□□□□ 0.2
CBX3-203ENST00000409747 MTMR3Q13615 1198 aa16.3■□□□□ 0.2
CBX3-203ENST00000409747 C15orf39Q6ZRI6 1047 aa16.3■□□□□ 0.2
CBX3-203ENST00000409747 UBALD2Q8IYN6 164 aa16.3■□□□□ 0.2
CBX3-203ENST00000409747 RNF168Q8IYW5 571 aaPredicted RBP16.3■□□□□ 0.2
CBX3-203ENST00000409747 IFT74Q96LB3 600 aa16.3■□□□□ 0.2
CBX3-203ENST00000409747 KIF2CQ99661 725 aa16.3■□□□□ 0.2
CBX3-203ENST00000409747 ADPGKQ9BRR6 497 aa16.3■□□□□ 0.2
CBX3-203ENST00000409747 LRWD1Q9UFC0 647 aa16.3■□□□□ 0.2
CBX3-203ENST00000409747 PARP2Q9UGN5 583 aa16.3■□□□□ 0.2
CBX3-203ENST00000409747 SORCS3Q9UPU3 1222 aa16.3■□□□□ 0.2
CBX3-203ENST00000409747 ZNF318Q5VUA4 2279 aa16.29■□□□□ 0.2
CBX3-203ENST00000409747 U2AF2P26368 475 aaKnown RBP eCLIP16.29■□□□□ 0.2
CBX3-203ENST00000409747 CREMQ03060 361 aa16.29■□□□□ 0.2
CBX3-203ENST00000409747 PDIA5Q14554 519 aa16.29■□□□□ 0.2
CBX3-203ENST00000409747 C8orf34Q49A92 452 aa16.29■□□□□ 0.2
CBX3-203ENST00000409747 TMC5Q6UXY8 1006 aa16.29■□□□□ 0.2
CBX3-203ENST00000409747 GPR149Q86SP6 731 aa16.29■□□□□ 0.2
CBX3-203ENST00000409747 CDR2LQ86X02 465 aaPredicted RBP16.29■□□□□ 0.2
CBX3-203ENST00000409747 GPR65Q8IYL9 337 aa16.29■□□□□ 0.2
CBX3-203ENST00000409747 ZDHHC14Q8IZN3 488 aa16.29■□□□□ 0.2
CBX3-203ENST00000409747 FBXL6Q8N531 539 aa16.29■□□□□ 0.2
CBX3-203ENST00000409747 KIFAP3Q92845 792 aa16.29■□□□□ 0.2
CBX3-203ENST00000409747 DENND4AQ7Z401 1863 aa16.29■□□□□ 0.2
CBX3-203ENST00000409747 LAD1O00515 517 aa16.28■□□□□ 0.2
CBX3-203ENST00000409747 ST18O60284 1047 aa16.28■□□□□ 0.2
CBX3-203ENST00000409747 EFEMP2O95967 443 aa16.28■□□□□ 0.2
CBX3-203ENST00000409747 PRKCBP05771 671 aa16.28■□□□□ 0.2
CBX3-203ENST00000409747 WEE2P0C1S8 567 aa16.28■□□□□ 0.2
CBX3-203ENST00000409747 EFNA5P52803 228 aa16.28■□□□□ 0.2
CBX3-203ENST00000409747 DSG1Q02413 1049 aa16.28■□□□□ 0.2
CBX3-203ENST00000409747 RABEP1Q15276 862 aa16.28■□□□□ 0.2
CBX3-203ENST00000409747 CCDC149Q6ZUS6 474 aa16.28■□□□□ 0.2
CBX3-203ENST00000409747 KREMEN2Q8NCW0 462 aa16.28■□□□□ 0.2
CBX3-203ENST00000409747 GSTCDQ8NEC7 633 aa16.28■□□□□ 0.2
CBX3-203ENST00000409747 ACSF2Q96CM8 615 aaPredicted RBP16.28■□□□□ 0.2
CBX3-203ENST00000409747 ASIC4Q96FT7 647 aa16.28■□□□□ 0.2
CBX3-203ENST00000409747 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.28■□□□□ 0.2
CBX3-203ENST00000409747 MIOSQ9NXC5 875 aa16.28■□□□□ 0.2
CBX3-203ENST00000409747 ACKR2O00590 384 aa16.28■□□□□ 0.2
CBX3-203ENST00000409747 GLUD1P00367 558 aa16.28■□□□□ 0.2
CBX3-203ENST00000409747 C1RP00736 705 aa16.28■□□□□ 0.2
CBX3-203ENST00000409747 USP41Q3LFD5 358 aa16.28■□□□□ 0.2
CBX3-203ENST00000409747 KIAA0319Q5VV43 1072 aa16.28■□□□□ 0.2
CBX3-203ENST00000409747 FUT10Q6P4F1 479 aa16.28■□□□□ 0.2
CBX3-203ENST00000409747 CYP26C1Q6V0L0 522 aa16.28■□□□□ 0.2
CBX3-203ENST00000409747 OTOP3Q7RTS5 596 aa16.28■□□□□ 0.2
CBX3-203ENST00000409747 APBB1IPQ7Z5R6 666 aaPredicted RBP16.28■□□□□ 0.2
CBX3-203ENST00000409747 C4orf32Q8N8J7 132 aa16.28■□□□□ 0.2
CBX3-203ENST00000409747 CMASQ8NFW8 434 aaPredicted RBP16.28■□□□□ 0.2
CBX3-203ENST00000409747 PDZD7Q9H5P4 517 aa16.28■□□□□ 0.2
CBX3-203ENST00000409747 RXFP1Q9HBX9 757 aa16.28■□□□□ 0.2
CBX3-203ENST00000409747 MAN1C1Q9NR34 630 aa16.28■□□□□ 0.2
CBX3-203ENST00000409747 KLK14Q9P0G3 267 aa16.28■□□□□ 0.2
CBX3-203ENST00000409747 ADAM28Q9UKQ2 775 aa16.28■□□□□ 0.2
CBX3-203ENST00000409747 TEX28O15482 410 aa16.27■□□□□ 0.19
CBX3-203ENST00000409747 NHLH1Q02575 133 aa16.27■□□□□ 0.19
CBX3-203ENST00000409747 PTGDRQ13258 359 aa16.27■□□□□ 0.19
CBX3-203ENST00000409747 TUSC3Q13454 348 aa16.27■□□□□ 0.19
CBX3-203ENST00000409747 DCAF4L1Q3SXM0 396 aa16.27■□□□□ 0.19
CBX3-203ENST00000409747 TAS1R1Q7RTX1 841 aa16.27■□□□□ 0.19
CBX3-203ENST00000409747 IGSF22Q8N9C0 903 aa16.27■□□□□ 0.19
CBX3-203ENST00000409747 SNX29Q8TEQ0 813 aa16.27■□□□□ 0.19
CBX3-203ENST00000409747 HDAC7Q8WUI4 952 aa16.27■□□□□ 0.19
CBX3-203ENST00000409747 BSNDQ8WZ55 320 aa16.27■□□□□ 0.19
CBX3-203ENST00000409747 CCDC113Q9H0I3 377 aa16.27■□□□□ 0.19
CBX3-203ENST00000409747 BHMT2Q9H2M3 363 aa16.27■□□□□ 0.19
CBX3-203ENST00000409747 CHST7Q9NS84 486 aa16.27■□□□□ 0.19
CBX3-203ENST00000409747 KIAA1024Q9UPX6 916 aa16.27■□□□□ 0.19
CBX3-203ENST00000409747 SF3B1O75533 1304 aaKnown RBP eCLIP16.27■□□□□ 0.193e-6■■■□□ 15.6
CBX3-203ENST00000409747 TADA2AO75478 443 aa16.26■□□□□ 0.19
CBX3-203ENST00000409747 PRPHP41219 470 aa16.26■□□□□ 0.19
CBX3-203ENST00000409747 HSP90AA2PQ14568 343 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms