RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 HAUS6Q7Z4H7 955 aa34.23■■■■□ 3.07
TRAF3IP1-203ENST00000409739 DHX58Q96C10 678 aa34.23■■■■□ 3.07
TRAF3IP1-203ENST00000409739 DNAJC19Q96DA6 116 aa34.23■■■■□ 3.07
TRAF3IP1-203ENST00000409739 FIZ1Q96SL8 496 aa34.23■■■■□ 3.07
TRAF3IP1-203ENST00000409739 KANSL3Q9P2N6 904 aa34.23■■■■□ 3.07
TRAF3IP1-203ENST00000409739 TRAK2O60296 914 aa34.22■■■■□ 3.07
TRAF3IP1-203ENST00000409739 POMCP01189 267 aa34.22■■■■□ 3.07
TRAF3IP1-203ENST00000409739 PPM1AP35813 382 aa34.22■■■■□ 3.07
TRAF3IP1-203ENST00000409739 BCAR1P56945 870 aa34.22■■■■□ 3.07
TRAF3IP1-203ENST00000409739 NUCB2P80303 420 aa34.22■■■■□ 3.07
TRAF3IP1-203ENST00000409739 GBP3Q9H0R5 595 aa34.22■■■■□ 3.07
TRAF3IP1-203ENST00000409739 PTPRHQ9HD43 1115 aa34.22■■■■□ 3.07
TRAF3IP1-203ENST00000409739 PARP2Q9UGN5 583 aa34.22■■■■□ 3.07
TRAF3IP1-203ENST00000409739 CSPG5O95196 566 aa34.21■■■■□ 3.07
TRAF3IP1-203ENST00000409739 ZNF280BQ86YH2 543 aa34.21■■■■□ 3.07
TRAF3IP1-203ENST00000409739 FAM178BQ8IXR5 827 aa34.21■■■■□ 3.07
TRAF3IP1-203ENST00000409739 SLC39A11Q8N1S5 342 aa34.21■■■■□ 3.07
TRAF3IP1-203ENST00000409739 POF1BQ8WVV4 589 aa34.21■■■■□ 3.07
TRAF3IP1-203ENST00000409739 CDT1Q9H211 546 aa34.21■■■■□ 3.07
TRAF3IP1-203ENST00000409739 CUEDC2Q9H467 287 aa34.21■■■■□ 3.07
TRAF3IP1-203ENST00000409739 SNTG2Q9NY99 539 aa34.21■■■■□ 3.07
TRAF3IP1-203ENST00000409739 FAM13BQ9NYF5 915 aa34.21■■■■□ 3.07
TRAF3IP1-203ENST00000409739 DNAJB4Q9UDY4 337 aa34.21■■■■□ 3.07
TRAF3IP1-203ENST00000409739 ABLIM1O14639 778 aa34.2■■■■□ 3.07
TRAF3IP1-203ENST00000409739 DDHD2O94830 711 aa34.2■■■■□ 3.07
TRAF3IP1-203ENST00000409739 PROZP22891 400 aa34.2■■■■□ 3.07
TRAF3IP1-203ENST00000409739 SCNN1GP51170 649 aa34.2■■■■□ 3.07
TRAF3IP1-203ENST00000409739 UBE3AQ05086 875 aa34.2■■■■□ 3.07
TRAF3IP1-203ENST00000409739 ZNF568Q3ZCX4 644 aa34.2■■■■□ 3.07
TRAF3IP1-203ENST00000409739 APBB1IPQ7Z5R6 666 aaPredicted RBP34.2■■■■□ 3.07
TRAF3IP1-203ENST00000409739 SFR1Q86XK3 245 aa34.2■■■■□ 3.07
TRAF3IP1-203ENST00000409739 IQUBQ8NA54 791 aa34.2■■■■□ 3.07
TRAF3IP1-203ENST00000409739 TNMDQ9H2S6 317 aa34.2■■■■□ 3.07
TRAF3IP1-203ENST00000409739 PRDM6Q9NQX0 595 aa34.2■■■■□ 3.07
TRAF3IP1-203ENST00000409739 MIOSQ9NXC5 875 aa34.2■■■■□ 3.07
TRAF3IP1-203ENST00000409739 SPG21Q9NZD8 308 aa34.2■■■■□ 3.07
TRAF3IP1-203ENST00000409739 KLK14Q9P0G3 267 aa34.2■■■■□ 3.07
TRAF3IP1-203ENST00000409739 POLR2DO15514 142 aaKnown RBP34.19■■■■□ 3.06
TRAF3IP1-203ENST00000409739 RECQL4O94761 1208 aa34.19■■■■□ 3.06
TRAF3IP1-203ENST00000409739 ALDH7A1P49419 539 aaKnown RBP34.19■■■■□ 3.06
TRAF3IP1-203ENST00000409739 PLCB3Q01970 1234 aa34.19■■■■□ 3.06
TRAF3IP1-203ENST00000409739 GSTCDQ8NEC7 633 aa34.19■■■■□ 3.06
TRAF3IP1-203ENST00000409739 STAMQ92783 540 aa34.19■■■■□ 3.06
TRAF3IP1-203ENST00000409739 SCAND2PQ9GZW5 306 aaPredicted RBP34.19■■■■□ 3.06
TRAF3IP1-203ENST00000409739 NSUN3Q9H649 340 aaKnown RBP34.19■■■■□ 3.06
TRAF3IP1-203ENST00000409739 KBTBD4Q9NVX7 518 aa34.19■■■■□ 3.06
TRAF3IP1-203ENST00000409739 NT5C1B-RDH14C9J2C7 533 aa34.18■■■■□ 3.06
TRAF3IP1-203ENST00000409739 SCP2P22307 547 aa34.18■■■■□ 3.06
TRAF3IP1-203ENST00000409739 NMT1P30419 496 aaKnown RBP34.18■■■■□ 3.06
TRAF3IP1-203ENST00000409739 MPZL3Q6UWV2 235 aa34.18■■■■□ 3.06
TRAF3IP1-203ENST00000409739 GALTP07902 379 aa34.17■■■■□ 3.06
TRAF3IP1-203ENST00000409739 SLC11A1P49279 550 aa34.17■■■■□ 3.06
TRAF3IP1-203ENST00000409739 SKIV2LQ15477 1246 aaKnown RBP34.17■■■■□ 3.06
TRAF3IP1-203ENST00000409739 ADALQ6DHV7 355 aa34.17■■■■□ 3.06
TRAF3IP1-203ENST00000409739 ZPBP2Q6X784 338 aa34.17■■■■□ 3.06
TRAF3IP1-203ENST00000409739 ZBTB33Q86T24 672 aa34.17■■■■□ 3.06
TRAF3IP1-203ENST00000409739 TMEM173Q86WV6 379 aaPredicted RBP34.17■■■■□ 3.06
TRAF3IP1-203ENST00000409739 MRPS27Q92552 414 aaKnown RBP34.17■■■■□ 3.06
TRAF3IP1-203ENST00000409739 ZBTB45Q96K62 511 aaPredicted RBP34.17■■■■□ 3.06
TRAF3IP1-203ENST00000409739 FAM193BQ96PV7 902 aaPredicted RBP34.17■■■■□ 3.06
TRAF3IP1-203ENST00000409739 SEL1LQ9UBV2 794 aa34.17■■■■□ 3.06
TRAF3IP1-203ENST00000409739 TBX20Q9UMR3 447 aa34.17■■■■□ 3.06
TRAF3IP1-203ENST00000409739 LZTS1Q9Y250 596 aa34.17■■■■□ 3.06
TRAF3IP1-203ENST00000409739 GDAQ9Y2T3 454 aa34.17■■■■□ 3.06
TRAF3IP1-203ENST00000409739 FRMD3A2A2Y4 597 aa34.16■■■■□ 3.06
TRAF3IP1-203ENST00000409739 CARNS1A5YM72 827 aa34.16■■■■□ 3.06
TRAF3IP1-203ENST00000409739 TOM1L1O75674 476 aa34.16■■■■□ 3.06
TRAF3IP1-203ENST00000409739 GAP43P17677 238 aa34.16■■■■□ 3.06
TRAF3IP1-203ENST00000409739 IRS1P35568 1242 aa34.16■■■■□ 3.06
TRAF3IP1-203ENST00000409739 DSC1Q08554 894 aa34.16■■■■□ 3.06
TRAF3IP1-203ENST00000409739 TCEAL5Q5H9L2 206 aa34.16■■■■□ 3.06
TRAF3IP1-203ENST00000409739 CEP120Q8N960 986 aa34.16■■■■□ 3.06
TRAF3IP1-203ENST00000409739 RPS6KC1Q96S38 1066 aa34.16■■■■□ 3.06
TRAF3IP1-203ENST00000409739 TMEM175Q9BSA9 504 aa34.16■■■■□ 3.06
TRAF3IP1-203ENST00000409739 TLR9Q9NR96 1032 aa34.16■■■■□ 3.06
TRAF3IP1-203ENST00000409739 ANKFY1Q9P2R3 1169 aa34.16■■■■□ 3.06
TRAF3IP1-203ENST00000409739 KCNH3Q9ULD8 1083 aa34.16■■■■□ 3.06
TRAF3IP1-203ENST00000409739 XIRP2A4UGR9 3374 aa34.15■■■■□ 3.06
TRAF3IP1-203ENST00000409739 MCF2P10911 925 aa34.15■■■■□ 3.06
TRAF3IP1-203ENST00000409739 IDEP14735 1019 aa34.15■■■■□ 3.06
TRAF3IP1-203ENST00000409739 GTF2BQ00403 316 aa34.15■■■■□ 3.06
TRAF3IP1-203ENST00000409739 GRIK3Q13003 919 aa34.15■■■■□ 3.06
TRAF3IP1-203ENST00000409739 COLGALT2Q8IYK4 626 aa34.15■■■■□ 3.06
TRAF3IP1-203ENST00000409739 SLC17A8Q8NDX2 589 aa34.15■■■■□ 3.06
TRAF3IP1-203ENST00000409739 BICD1Q96G01 975 aa34.15■■■■□ 3.06
TRAF3IP1-203ENST00000409739 ST6GALNAC4Q9H4F1 302 aa34.15■■■■□ 3.06
TRAF3IP1-203ENST00000409739 MAGEF1Q9HAY2 307 aa34.15■■■■□ 3.06
TRAF3IP1-203ENST00000409739 CMA1P23946 247 aa34.14■■■■□ 3.06
TRAF3IP1-203ENST00000409739 GRM5P41594 1212 aa34.14■■■■□ 3.06
TRAF3IP1-203ENST00000409739 NOLC1Q14978 699 aaKnown RBP eCLIP34.14■■■■□ 3.06
TRAF3IP1-203ENST00000409739 PHF6Q8IWS0 365 aaKnown RBP eCLIP34.14■■■■□ 3.06
TRAF3IP1-203ENST00000409739 BCL7CQ8WUZ0 217 aaPredicted RBP34.14■■■■□ 3.06
TRAF3IP1-203ENST00000409739 IGSF21Q96ID5 467 aa34.14■■■■□ 3.06
TRAF3IP1-203ENST00000409739 TCHPQ9BT92 498 aa34.14■■■■□ 3.06
TRAF3IP1-203ENST00000409739 TRIM9Q9C026 710 aa34.14■■■■□ 3.06
TRAF3IP1-203ENST00000409739 LRRC27Q9C0I9 530 aa34.14■■■■□ 3.06
TRAF3IP1-203ENST00000409739 CXCL16Q9H2A7 254 aa34.14■■■■□ 3.06
TRAF3IP1-203ENST00000409739 GDPD2Q9HCC8 539 aa34.14■■■■□ 3.06
TRAF3IP1-203ENST00000409739 PCDHGC5Q9Y5F6 944 aa34.14■■■■□ 3.06
TRAF3IP1-203ENST00000409739 PTGESO14684 152 aa34.13■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms