RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 ACKR2O00590 384 aa15.28■□□□□ 0.04
GPNMB-203ENST00000409458 TOM1L1O75674 476 aa15.28■□□□□ 0.04
GPNMB-203ENST00000409458 PGK1P00558 417 aa15.28■□□□□ 0.04
GPNMB-203ENST00000409458 PRKAR2AP13861 404 aaKnown RBP15.28■□□□□ 0.04
GPNMB-203ENST00000409458 MXI1P50539 228 aa15.28■□□□□ 0.04
GPNMB-203ENST00000409458 CDK17Q00537 523 aa15.28■□□□□ 0.04
GPNMB-203ENST00000409458 GJB7Q6PEY0 223 aa15.28■□□□□ 0.04
GPNMB-203ENST00000409458 RUFY4Q6ZNE9 571 aa15.28■□□□□ 0.04
GPNMB-203ENST00000409458 ZBTB33Q86T24 672 aa15.28■□□□□ 0.04
GPNMB-203ENST00000409458 REXO1L1PQ8IX06 675 aa15.28■□□□□ 0.04
GPNMB-203ENST00000409458 TMC2Q8TDI7 906 aa15.28■□□□□ 0.04
GPNMB-203ENST00000409458 POP1Q99575 1024 aaKnown RBP15.28■□□□□ 0.04
GPNMB-203ENST00000409458 P4HA2O15460 535 aa15.27■□□□□ 0.03
GPNMB-203ENST00000409458 FAM189A1O60320 539 aa15.27■□□□□ 0.03
GPNMB-203ENST00000409458 CSDE1O75534 798 aaKnown RBP15.27■□□□□ 0.03
GPNMB-203ENST00000409458 PLEKP08567 350 aaPredicted RBP15.27■□□□□ 0.03
GPNMB-203ENST00000409458 RARBP10826 455 aa15.27■□□□□ 0.03
GPNMB-203ENST00000409458 PROZP22891 400 aa15.27■□□□□ 0.03
GPNMB-203ENST00000409458 GPC3P51654 580 aa15.27■□□□□ 0.03
GPNMB-203ENST00000409458 ADAM17P78536 824 aa15.27■□□□□ 0.03
GPNMB-203ENST00000409458 ENPEPQ07075 957 aa15.27■□□□□ 0.03
GPNMB-203ENST00000409458 PRPF4BQ13523 1007 aaKnown RBP15.27■□□□□ 0.03
GPNMB-203ENST00000409458 AMHR2Q16671 573 aa15.27■□□□□ 0.03
GPNMB-203ENST00000409458 EPC2Q52LR7 807 aa15.27■□□□□ 0.03
GPNMB-203ENST00000409458 SEZ6Q53EL9 994 aa15.27■□□□□ 0.03
GPNMB-203ENST00000409458 IQCEQ6IPM2 695 aa15.27■□□□□ 0.03
GPNMB-203ENST00000409458 TSHZ1Q6ZSZ6 1077 aa15.27■□□□□ 0.03
GPNMB-203ENST00000409458 ACRBPQ8NEB7 543 aa15.27■□□□□ 0.03
GPNMB-203ENST00000409458 LMO3Q8TAP4 145 aa15.27■□□□□ 0.03
GPNMB-203ENST00000409458 NLRP7Q8WX94 980 aa15.27■□□□□ 0.03
GPNMB-203ENST00000409458 FAM49AQ9H0Q0 323 aaPredicted RBP15.27■□□□□ 0.03
GPNMB-203ENST00000409458 PRMT7Q9NVM4 692 aaPredicted RBP15.27■□□□□ 0.03
GPNMB-203ENST00000409458 RBAKQ9NYW8 714 aaPredicted RBP15.27■□□□□ 0.03
GPNMB-203ENST00000409458 FBXL5Q9UKA1 691 aa15.27■□□□□ 0.03
GPNMB-203ENST00000409458 ADGRG1Q9Y653 693 aa15.27■□□□□ 0.03
GPNMB-203ENST00000409458 HTTP42858 3142 aa15.27■□□□□ 0.03
GPNMB-203ENST00000409458 TRIP12Q14669 1992 aaPredicted RBP15.26■□□□□ 0.03
GPNMB-203ENST00000409458 SCN10AQ9Y5Y9 1956 aa15.26■□□□□ 0.03
GPNMB-203ENST00000409458 PMM2O15305 246 aa15.26■□□□□ 0.03
GPNMB-203ENST00000409458 CLDN3O15551 220 aa15.26■□□□□ 0.03
GPNMB-203ENST00000409458 CCP110O43303 1012 aa15.26■□□□□ 0.03
GPNMB-203ENST00000409458 DLATP10515 647 aaKnown RBP15.26■□□□□ 0.03
GPNMB-203ENST00000409458 CYP2C9P11712 490 aa15.26■□□□□ 0.03
GPNMB-203ENST00000409458 HOXD10P28358 340 aa15.26■□□□□ 0.03
GPNMB-203ENST00000409458 MCL1Q07820 350 aa15.26■□□□□ 0.03
GPNMB-203ENST00000409458 RAPGEF1Q13905 1077 aa15.26■□□□□ 0.03
GPNMB-203ENST00000409458 PSMD6Q15008 389 aa15.26■□□□□ 0.03
GPNMB-203ENST00000409458 FAM187BQ17R55 369 aa15.26■□□□□ 0.03
GPNMB-203ENST00000409458 GNASQ5JWF2 1037 aa15.26■□□□□ 0.03
GPNMB-203ENST00000409458 ATF7IP2Q5U623 682 aa15.26■□□□□ 0.03
GPNMB-203ENST00000409458 SFMBT2Q5VUG0 894 aa15.26■□□□□ 0.03
GPNMB-203ENST00000409458 NYAP1Q6ZVC0 841 aa15.26■□□□□ 0.03
GPNMB-203ENST00000409458 FAM84AQ96KN4 292 aa15.26■□□□□ 0.03
GPNMB-203ENST00000409458 NHEJ1Q9H9Q4 299 aaPredicted RBP15.26■□□□□ 0.03
GPNMB-203ENST00000409458 TMEM8AQ9HCN3 771 aa15.26■□□□□ 0.03
GPNMB-203ENST00000409458 PTPRHQ9HD43 1115 aa15.26■□□□□ 0.03
GPNMB-203ENST00000409458 ARHGAP20Q9P2F6 1191 aa15.26■□□□□ 0.03
GPNMB-203ENST00000409458 CNTNAP2Q9UHC6 1331 aa15.26■□□□□ 0.03
GPNMB-203ENST00000409458 SMIM35A0A1B0GVV1 85 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 ZSCAN12O43309 604 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 ZEB2O60315 1214 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 ADAMTS4O75173 837 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 LRRN2O75325 713 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 NDUFA10O95299 355 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 LDHAP00338 332 aaKnown RBP15.25■□□□□ 0.03
GPNMB-203ENST00000409458 HMGCRP04035 888 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 CCDC175P0C221 793 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 HOXC8P31273 242 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 TNFSF9P41273 254 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 JAM2P57087 298 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 NKX3-2P78367 333 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 ZNF200P98182 395 aaPredicted RBP15.25■□□□□ 0.03
GPNMB-203ENST00000409458 MAP2K1Q02750 393 aaPredicted RBP15.25■□□□□ 0.03
GPNMB-203ENST00000409458 TMEM62Q0P6H9 643 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 EEF1DP3Q658K8 133 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 MPZL3Q6UWV2 235 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 USP37Q86T82 979 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 ZNF410Q86VK4 478 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 EHBP1Q8NDI1 1231 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 SYN2Q92777 582 aaPredicted RBP15.25■□□□□ 0.03
GPNMB-203ENST00000409458 SCLT1Q96NL6 688 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 MTG1Q9BT17 334 aaPredicted RBP15.25■□□□□ 0.03
GPNMB-203ENST00000409458 TCHPQ9BT92 498 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 NUCKS1Q9H1E3 243 aaKnown RBP15.25■□□□□ 0.03
GPNMB-203ENST00000409458 HDAC6Q9UBN7 1215 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 PTPRJQ12913 1337 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 A0A0U1RQJ8 604 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 C17orf102A2RUQ5 167 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 TREHO43280 583 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 KPNA6O60684 536 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 GTF2H1P32780 548 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 CETN1Q12798 172 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 TMEM132AQ24JP5 1023 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 ZNF568Q3ZCX4 644 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 MAP3K21Q5TCX8 1036 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 HGSNATQ68CP4 663 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 LMBRD2Q68DH5 695 aaPredicted RBP15.25■□□□□ 0.03
GPNMB-203ENST00000409458 KRT39Q6A163 491 aa15.25■□□□□ 0.03
GPNMB-203ENST00000409458 CDR2LQ86X02 465 aaPredicted RBP15.25■□□□□ 0.03
GPNMB-203ENST00000409458 ATRIPQ8WXE1 791 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms