RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 FAM102BQ5T8I3 360 aa12.86□□□□□ -0.35
RBM39-206ENST00000403542 TATDN1Q6P1N9 297 aa12.86□□□□□ -0.35
RBM39-206ENST00000403542 RNF207Q6ZRF8 634 aa12.86□□□□□ -0.35
RBM39-206ENST00000403542 STXBP4Q6ZWJ1 553 aa12.86□□□□□ -0.35
RBM39-206ENST00000403542 RHOT2Q8IXI1 618 aa12.86□□□□□ -0.35
RBM39-206ENST00000403542 SGSM3Q96HU1 749 aa12.86□□□□□ -0.35
RBM39-206ENST00000403542 GMCL1Q96IK5 515 aa12.86□□□□□ -0.35
RBM39-206ENST00000403542 TMEM117Q9H0C3 514 aa12.86□□□□□ -0.35
RBM39-206ENST00000403542 CXorf56Q9H5V9 222 aa12.86□□□□□ -0.35
RBM39-206ENST00000403542 VEZTQ9HBM0 779 aa12.86□□□□□ -0.35
RBM39-206ENST00000403542 STK38LQ9Y2H1 464 aa12.86□□□□□ -0.35
RBM39-206ENST00000403542 SYNGAP1Q96PV0 1343 aa12.86□□□□□ -0.35
RBM39-206ENST00000403542 ATXN2Q99700 1313 aaKnown RBP12.86□□□□□ -0.35
RBM39-206ENST00000403542 MMP10P09238 476 aa12.86□□□□□ -0.35
RBM39-206ENST00000403542 CHRNA3P32297 505 aa12.86□□□□□ -0.35
RBM39-206ENST00000403542 COILP38432 576 aaPredicted RBP12.86□□□□□ -0.35
RBM39-206ENST00000403542 MMP13P45452 471 aa12.86□□□□□ -0.35
RBM39-206ENST00000403542 PEX5P50542 639 aa12.86□□□□□ -0.35
RBM39-206ENST00000403542 CETN1Q12798 172 aa12.86□□□□□ -0.35
RBM39-206ENST00000403542 AUHQ13825 339 aaKnown RBP12.86□□□□□ -0.35
RBM39-206ENST00000403542 DHX34Q14147 1143 aaKnown RBP12.86□□□□□ -0.35
RBM39-206ENST00000403542 C1orf220Q5T0J3 134 aa12.86□□□□□ -0.35
RBM39-206ENST00000403542 SLC13A5Q86YT5 568 aaPredicted RBP12.86□□□□□ -0.35
RBM39-206ENST00000403542 ANKS4BQ8N8V4 417 aa12.86□□□□□ -0.35
RBM39-206ENST00000403542 GIMAP7Q8NHV1 300 aa12.86□□□□□ -0.35
RBM39-206ENST00000403542 N4BP2L2Q92802 583 aaPredicted RBP12.86□□□□□ -0.35
RBM39-206ENST00000403542 SLC5A5Q92911 643 aa12.86□□□□□ -0.35
RBM39-206ENST00000403542 HERPUD2Q9BSE4 406 aa12.86□□□□□ -0.35
RBM39-206ENST00000403542 CDC42EP4Q9H3Q1 356 aaKnown RBP12.86□□□□□ -0.35
RBM39-206ENST00000403542 CNOT10Q9H9A5 744 aaKnown RBP12.86□□□□□ -0.35
RBM39-206ENST00000403542 KLHL11Q9NVR0 708 aa12.86□□□□□ -0.35
RBM39-206ENST00000403542 TTC7AQ9ULT0 858 aaPredicted RBP12.86□□□□□ -0.35
RBM39-206ENST00000403542 TRIM33Q9UPN9 1127 aa12.86□□□□□ -0.35
RBM39-206ENST00000403542 AGAP1Q9UPQ3 857 aa12.86□□□□□ -0.35
RBM39-206ENST00000403542 SUGT1Q9Y2Z0 365 aa12.86□□□□□ -0.35
RBM39-206ENST00000403542 AHDC1Q5TGY3 1603 aaPredicted RBP12.85□□□□□ -0.35
RBM39-206ENST00000403542 PFASO15067 1338 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 EIF4E1BA6NMX2 242 aaKnown RBP12.85□□□□□ -0.35
RBM39-206ENST00000403542 CDC25CP30307 473 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 CHRNA5P30532 468 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 KRT17Q04695 432 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 CALCOCO2Q13137 446 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 MTM1Q13496 603 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 ACCSLQ4AC99 568 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 SGO2Q562F6 1265 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 FAM182AQ5T1J6 154 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 NUGGCQ68CJ6 796 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 EXOC3L1Q86VI1 746 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 CCDC50Q8IVM0 306 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 CPA5Q8WXQ8 436 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 PRCCQ92733 491 aaPredicted RBP12.85□□□□□ -0.35
RBM39-206ENST00000403542 TEKT3Q9BXF9 490 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 ACTR5Q9H9F9 607 aaPredicted RBP12.85□□□□□ -0.35
RBM39-206ENST00000403542 KCNH7Q9NS40 1196 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 ZHX2Q9Y6X8 837 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 C5orf60A6NFR6 353 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 FAM187AA6NFU0 413 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 NFIBO00712 420 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 GJB6O95452 261 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 PAEPP09466 180 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 KCNJ2P63252 427 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 PPP2R5CQ13362 524 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 RASA3Q14644 834 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 DACT2Q5SW24 774 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 ZFYVE27Q5T4F4 411 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 PASD1Q8IV76 773 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 GMCL1P1Q8NEA9 526 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 ARHGEF2Q92974 986 aaKnown RBP12.85□□□□□ -0.35
RBM39-206ENST00000403542 MKNK1Q9BUB5 465 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.85□□□□□ -0.35
RBM39-206ENST00000403542 COL20A1Q9P218 1284 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 ANAPC7Q9UJX3 599 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 ODF2LQ9ULJ1 636 aa12.85□□□□□ -0.35
RBM39-206ENST00000403542 TMEM120BA0PK00 339 aa12.84□□□□□ -0.35
RBM39-206ENST00000403542 A8MUI8 341 aa12.84□□□□□ -0.35
RBM39-206ENST00000403542 ECEL1O95672 775 aa12.84□□□□□ -0.35
RBM39-206ENST00000403542 NUDT17P0C025 328 aa12.84□□□□□ -0.35
RBM39-206ENST00000403542 MYCLP12524 364 aaPredicted RBP12.84□□□□□ -0.35
RBM39-206ENST00000403542 ADRA2BP18089 450 aa12.84□□□□□ -0.35
RBM39-206ENST00000403542 EIF2AK2P19525 551 aaKnown RBP12.84□□□□□ -0.35
RBM39-206ENST00000403542 ANXA13P27216 316 aa12.84□□□□□ -0.35
RBM39-206ENST00000403542 NF2P35240 595 aa12.84□□□□□ -0.35
RBM39-206ENST00000403542 PPP2R5AQ15172 486 aa12.84□□□□□ -0.35
RBM39-206ENST00000403542 UGCGQ16739 394 aa12.84□□□□□ -0.35
RBM39-206ENST00000403542 HAUS6Q7Z4H7 955 aa12.84□□□□□ -0.35
RBM39-206ENST00000403542 LDHDQ86WU2 507 aa12.84□□□□□ -0.35
RBM39-206ENST00000403542 XXYLT1Q8NBI6 393 aa12.84□□□□□ -0.35
RBM39-206ENST00000403542 TAS1R2Q8TE23 839 aa12.84□□□□□ -0.35
RBM39-206ENST00000403542 C9orf72Q96LT7 481 aa12.84□□□□□ -0.35
RBM39-206ENST00000403542 LARSQ9P2J5 1176 aaKnown RBP12.84□□□□□ -0.35
RBM39-206ENST00000403542 PNMA3Q9UL41 463 aa12.84□□□□□ -0.35
RBM39-206ENST00000403542 USTQ9Y2C2 406 aa12.84□□□□□ -0.35
RBM39-206ENST00000403542 RTN2O75298 545 aa12.84□□□□□ -0.35
RBM39-206ENST00000403542 PIAS1O75925 651 aa12.84□□□□□ -0.35
RBM39-206ENST00000403542 UBOX5O94941 541 aa12.84□□□□□ -0.35
RBM39-206ENST00000403542 ZNF131P52739 623 aa12.84□□□□□ -0.35
RBM39-206ENST00000403542 FMO1Q01740 532 aa12.84□□□□□ -0.35
RBM39-206ENST00000403542 SPP2Q13103 211 aa12.84□□□□□ -0.35
RBM39-206ENST00000403542 FAM47EQ6ZV65 393 aa12.84□□□□□ -0.35
RBM39-206ENST00000403542 INTS8Q75QN2 995 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms