RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 DNAJB1P25685 340 aa21.08■□□□□ 0.97
RTN4-207ENST00000402434 PPM1AP35813 382 aa21.08■□□□□ 0.97
RTN4-207ENST00000402434 MLH1P40692 756 aa21.08■□□□□ 0.97
RTN4-207ENST00000402434 ALDH7A1P49419 539 aaKnown RBP21.08■□□□□ 0.97
RTN4-207ENST00000402434 BCAR1P56945 870 aa21.08■□□□□ 0.97
RTN4-207ENST00000402434 PLCB3Q01970 1234 aa21.08■□□□□ 0.97
RTN4-207ENST00000402434 UBE3AQ05086 875 aa21.08■□□□□ 0.97
RTN4-207ENST00000402434 RNASELQ05823 741 aaKnown RBP21.08■□□□□ 0.97
RTN4-207ENST00000402434 ZPBP2Q6X784 338 aa21.08■□□□□ 0.97
RTN4-207ENST00000402434 APBB1IPQ7Z5R6 666 aaPredicted RBP21.08■□□□□ 0.97
RTN4-207ENST00000402434 ZNF280BQ86YH2 543 aa21.08■□□□□ 0.97
RTN4-207ENST00000402434 FAM178BQ8IXR5 827 aa21.08■□□□□ 0.97
RTN4-207ENST00000402434 SLC17A8Q8NDX2 589 aa21.08■□□□□ 0.97
RTN4-207ENST00000402434 PPM1EQ8WY54 764 aa21.08■□□□□ 0.97
RTN4-207ENST00000402434 DHX58Q96C10 678 aa21.08■□□□□ 0.97
RTN4-207ENST00000402434 ZFP42Q96MM3 310 aa21.08■□□□□ 0.97
RTN4-207ENST00000402434 APOL6Q9BWW8 343 aa21.08■□□□□ 0.97
RTN4-207ENST00000402434 FRMD3A2A2Y4 597 aa21.07■□□□□ 0.96
RTN4-207ENST00000402434 POLR2DO15514 142 aaKnown RBP21.07■□□□□ 0.96
RTN4-207ENST00000402434 TOM1L1O75674 476 aa21.07■□□□□ 0.96
RTN4-207ENST00000402434 DDHD2O94830 711 aa21.07■□□□□ 0.96
RTN4-207ENST00000402434 ABCD1P33897 745 aa21.07■□□□□ 0.96
RTN4-207ENST00000402434 PBX3P40426 434 aa21.07■□□□□ 0.96
RTN4-207ENST00000402434 GTF2BQ00403 316 aa21.07■□□□□ 0.96
RTN4-207ENST00000402434 THNSL1Q8IYQ7 743 aa21.07■□□□□ 0.96
RTN4-207ENST00000402434 SLC39A11Q8N1S5 342 aa21.07■□□□□ 0.96
RTN4-207ENST00000402434 MICALL1Q8N3F8 863 aa21.07■□□□□ 0.96
RTN4-207ENST00000402434 LRRC27Q9C0I9 530 aa21.07■□□□□ 0.96
RTN4-207ENST00000402434 MAGEF1Q9HAY2 307 aa21.07■□□□□ 0.96
RTN4-207ENST00000402434 MIOSQ9NXC5 875 aa21.07■□□□□ 0.96
RTN4-207ENST00000402434 SPG21Q9NZD8 308 aa21.07■□□□□ 0.96
RTN4-207ENST00000402434 KCNH3Q9ULD8 1083 aa21.07■□□□□ 0.96
RTN4-207ENST00000402434 TBX20Q9UMR3 447 aa21.07■□□□□ 0.96
RTN4-207ENST00000402434 LZTS1Q9Y250 596 aa21.07■□□□□ 0.96
RTN4-207ENST00000402434 K7ENM7 598 aa21.07■□□□□ 0.96
RTN4-207ENST00000402434 B4GALT3O60512 393 aa21.07■□□□□ 0.96
RTN4-207ENST00000402434 ZC3H11AO75152 810 aaKnown RBP eCLIP21.07■□□□□ 0.964e-32■■□□□ 13.2
RTN4-207ENST00000402434 POMCP01189 267 aa21.07■□□□□ 0.96
RTN4-207ENST00000402434 GAP43P17677 238 aa21.07■□□□□ 0.96
RTN4-207ENST00000402434 CNNM4Q6P4Q7 775 aa21.07■□□□□ 0.96
RTN4-207ENST00000402434 ZNF720Q7Z2F6 126 aa21.07■□□□□ 0.96
RTN4-207ENST00000402434 POF1BQ8WVV4 589 aa21.07■□□□□ 0.96
RTN4-207ENST00000402434 PYM1Q9BRP8 204 aaKnown RBP21.07■□□□□ 0.96
RTN4-207ENST00000402434 CDT1Q9H211 546 aa21.07■□□□□ 0.96
RTN4-207ENST00000402434 SNTG2Q9NY99 539 aa21.07■□□□□ 0.96
RTN4-207ENST00000402434 DNAJB4Q9UDY4 337 aa21.07■□□□□ 0.96
RTN4-207ENST00000402434 PARP2Q9UGN5 583 aa21.07■□□□□ 0.96
RTN4-207ENST00000402434 REV3LO60673 3130 aa21.06■□□□□ 0.96
RTN4-207ENST00000402434 PIGRP01833 764 aa21.06■□□□□ 0.96
RTN4-207ENST00000402434 GALTP07902 379 aa21.06■□□□□ 0.96
RTN4-207ENST00000402434 MCF2P10911 925 aa21.06■□□□□ 0.96
RTN4-207ENST00000402434 NMT1P30419 496 aaKnown RBP21.06■□□□□ 0.96
RTN4-207ENST00000402434 SCNN1GP51170 649 aa21.06■□□□□ 0.96
RTN4-207ENST00000402434 AMPD3Q01432 767 aa21.06■□□□□ 0.96
RTN4-207ENST00000402434 DSC1Q08554 894 aa21.06■□□□□ 0.96
RTN4-207ENST00000402434 ZNF568Q3ZCX4 644 aa21.06■□□□□ 0.96
RTN4-207ENST00000402434 TIGD5Q53EQ6 642 aa21.06■□□□□ 0.96
RTN4-207ENST00000402434 MPZL3Q6UWV2 235 aa21.06■□□□□ 0.96
RTN4-207ENST00000402434 SFR1Q86XK3 245 aa21.06■□□□□ 0.96
RTN4-207ENST00000402434 STAMQ92783 540 aa21.06■□□□□ 0.96
RTN4-207ENST00000402434 TRIM9Q9C026 710 aa21.06■□□□□ 0.96
RTN4-207ENST00000402434 OLFML3Q9NRN5 406 aa21.06■□□□□ 0.96
RTN4-207ENST00000402434 BRWD1Q9NSI6 2320 aa21.05■□□□□ 0.96
RTN4-207ENST00000402434 PLXNA4Q9HCM2 1894 aa21.05■□□□□ 0.96
RTN4-207ENST00000402434 RECQL4O94761 1208 aa21.05■□□□□ 0.96
RTN4-207ENST00000402434 GRM5P41594 1212 aa21.05■□□□□ 0.96
RTN4-207ENST00000402434 COLGALT2Q8IYK4 626 aa21.05■□□□□ 0.96
RTN4-207ENST00000402434 MRPS27Q92552 414 aaKnown RBP21.05■□□□□ 0.96
RTN4-207ENST00000402434 ZBTB45Q96K62 511 aaPredicted RBP21.05■□□□□ 0.96
RTN4-207ENST00000402434 TMEM175Q9BSA9 504 aa21.05■□□□□ 0.96
RTN4-207ENST00000402434 TCHPQ9BT92 498 aa21.05■□□□□ 0.96
RTN4-207ENST00000402434 STRA6Q9BX79 667 aa21.05■□□□□ 0.96
RTN4-207ENST00000402434 GBP3Q9H0R5 595 aa21.05■□□□□ 0.96
RTN4-207ENST00000402434 KLK14Q9P0G3 267 aa21.05■□□□□ 0.96
RTN4-207ENST00000402434 HPSEQ9Y251 543 aa21.05■□□□□ 0.96
RTN4-207ENST00000402434 FAM237AA0A1B0GTK4 181 aa21.04■□□□□ 0.96
RTN4-207ENST00000402434 A0A1W2PQ27 194 aa21.04■□□□□ 0.96
RTN4-207ENST00000402434 A0A1W2PQ64 194 aa21.04■□□□□ 0.96
RTN4-207ENST00000402434 A0A1W2PQD8 194 aa21.04■□□□□ 0.96
RTN4-207ENST00000402434 NT5C1B-RDH14C9J2C7 533 aa21.04■□□□□ 0.96
RTN4-207ENST00000402434 PPP1R37O75864 691 aa21.04■□□□□ 0.96
RTN4-207ENST00000402434 IDEP14735 1019 aa21.04■□□□□ 0.96
RTN4-207ENST00000402434 SLC11A1P49279 550 aa21.04■□□□□ 0.96
RTN4-207ENST00000402434 KRT17Q04695 432 aa21.04■□□□□ 0.96
RTN4-207ENST00000402434 MCL1Q07820 350 aa21.04■□□□□ 0.96
RTN4-207ENST00000402434 MAP4K3Q8IVH8 894 aa21.04■□□□□ 0.96
RTN4-207ENST00000402434 FAM193BQ96PV7 902 aaPredicted RBP21.04■□□□□ 0.96
RTN4-207ENST00000402434 C7orf25Q9BPX7 421 aa21.04■□□□□ 0.96
RTN4-207ENST00000402434 NSUN3Q9H649 340 aaKnown RBP21.04■□□□□ 0.96
RTN4-207ENST00000402434 PUF60Q9UHX1 559 aaKnown RBP21.04■□□□□ 0.96
RTN4-207ENST00000402434 CIZ1Q9ULV3 898 aaPredicted RBP21.04■□□□□ 0.96
RTN4-207ENST00000402434 A0A1B0GVL5 298 aa21.03■□□□□ 0.96
RTN4-207ENST00000402434 PTGESO14684 152 aa21.03■□□□□ 0.96
RTN4-207ENST00000402434 CLDN3O15551 220 aa21.03■□□□□ 0.96
RTN4-207ENST00000402434 ALDH2P05091 517 aa21.03■□□□□ 0.96
RTN4-207ENST00000402434 PFKFB1P16118 471 aa21.03■□□□□ 0.96
RTN4-207ENST00000402434 GRIK3Q13003 919 aa21.03■□□□□ 0.96
RTN4-207ENST00000402434 ZC2HC1CQ53FD0 456 aaPredicted RBP21.03■□□□□ 0.96
RTN4-207ENST00000402434 HERC4Q5GLZ8 1057 aaPredicted RBP21.03■□□□□ 0.96
RTN4-207ENST00000402434 PDE12Q6L8Q7 609 aaKnown RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms