RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 P4HA2O15460 535 aa19.8■□□□□ 0.76
USP48-204ENST00000400301 EPC2Q52LR7 807 aa19.8■□□□□ 0.76
USP48-204ENST00000400301 ANKRD20A3Q5VUR7 823 aa19.8■□□□□ 0.76
USP48-204ENST00000400301 PLCD3Q8N3E9 789 aa19.8■□□□□ 0.76
USP48-204ENST00000400301 JPH2Q9BR39 696 aaPredicted RBP19.8■□□□□ 0.76
USP48-204ENST00000400301 HOXC10Q9NYD6 342 aa19.8■□□□□ 0.76
USP48-204ENST00000400301 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.8■□□□□ 0.76
USP48-204ENST00000400301 ICAM1P05362 532 aa19.8■□□□□ 0.76
USP48-204ENST00000400301 KRT17Q04695 432 aa19.8■□□□□ 0.76
USP48-204ENST00000400301 BYSLQ13895 437 aaKnown RBP19.8■□□□□ 0.76
USP48-204ENST00000400301 TKFCQ3LXA3 575 aa19.8■□□□□ 0.76
USP48-204ENST00000400301 ARHGEF2Q92974 986 aaKnown RBP19.8■□□□□ 0.76
USP48-204ENST00000400301 CAVIN3Q969G5 261 aa19.8■□□□□ 0.76
USP48-204ENST00000400301 ACAD9Q9H845 621 aa19.8■□□□□ 0.76
USP48-204ENST00000400301 SAYSD1Q9NPB0 183 aa19.8■□□□□ 0.76
USP48-204ENST00000400301 TTC7AQ9ULT0 858 aaPredicted RBP19.8■□□□□ 0.76
USP48-204ENST00000400301 ITGA4P13612 1032 aa19.8■□□□□ 0.76
USP48-204ENST00000400301 YWHAGP61981 247 aaKnown RBP eCLIP19.8■□□□□ 0.76
USP48-204ENST00000400301 SLC35G1Q2M3R5 365 aa19.8■□□□□ 0.76
USP48-204ENST00000400301 CBWD2Q8IUF1 395 aa19.8■□□□□ 0.76
USP48-204ENST00000400301 SREK1Q8WXA9 508 aaKnown RBP19.8■□□□□ 0.76
USP48-204ENST00000400301 CPA5Q8WXQ8 436 aa19.8■□□□□ 0.76
USP48-204ENST00000400301 DDX3XO00571 662 aaKnown RBP eCLIP19.8■□□□□ 0.769e-15■■■■□ 19.8
USP48-204ENST00000400301 FAM153BP0C7A2 387 aa19.8■□□□□ 0.76
USP48-204ENST00000400301 SNHG28P0DPA3 235 aa19.8■□□□□ 0.76
USP48-204ENST00000400301 FAM153CQ494X1 144 aa19.8■□□□□ 0.76
USP48-204ENST00000400301 SRRM1Q8IYB3 904 aaKnown RBP19.8■□□□□ 0.76
USP48-204ENST00000400301 CCHCR1Q8TD31 782 aa19.8■□□□□ 0.76
USP48-204ENST00000400301 CHMP6Q96FZ7 201 aa19.8■□□□□ 0.76
USP48-204ENST00000400301 TACO1Q9BSH4 297 aaKnown RBP19.8■□□□□ 0.76
USP48-204ENST00000400301 FGFBP2Q9BYJ0 223 aa19.8■□□□□ 0.76
USP48-204ENST00000400301 HESX1Q9UBX0 185 aa19.8■□□□□ 0.76
USP48-204ENST00000400301 FAM153AQ9UHL3 310 aa19.8■□□□□ 0.76
USP48-204ENST00000400301 NFIBO00712 420 aa19.79■□□□□ 0.76
USP48-204ENST00000400301 AARSP49588 968 aaKnown RBP eCLIP19.79■□□□□ 0.76
USP48-204ENST00000400301 BSPRYQ5W0U4 402 aa19.79■□□□□ 0.76
USP48-204ENST00000400301 RHOT1Q8IXI2 618 aa19.79■□□□□ 0.76
USP48-204ENST00000400301 PI4K2AQ9BTU6 479 aa19.79■□□□□ 0.76
USP48-204ENST00000400301 MEFVO15553 781 aaPredicted RBP19.79■□□□□ 0.76
USP48-204ENST00000400301 MMS22LQ6ZRQ5 1243 aa19.79■□□□□ 0.76
USP48-204ENST00000400301 TMEM143Q96AN5 459 aa19.79■□□□□ 0.76
USP48-204ENST00000400301 KLHL29Q96CT2 875 aa19.79■□□□□ 0.76
USP48-204ENST00000400301 ZWILCHQ9H900 591 aa19.79■□□□□ 0.76
USP48-204ENST00000400301 PHRF1Q9P1Y6 1649 aaKnown RBP19.79■□□□□ 0.76
USP48-204ENST00000400301 MYH2Q9UKX2 1941 aa19.79■□□□□ 0.76
USP48-204ENST00000400301 TJP3O95049 919 aa19.79■□□□□ 0.76
USP48-204ENST00000400301 SHROOM1Q2M3G4 852 aaPredicted RBP19.79■□□□□ 0.76
USP48-204ENST00000400301 TBC1D31Q96DN5 1066 aa19.79■□□□□ 0.76
USP48-204ENST00000400301 ZNF668Q96K58 619 aaPredicted RBP19.79■□□□□ 0.76
USP48-204ENST00000400301 PPP1R16BQ96T49 567 aa19.79■□□□□ 0.76
USP48-204ENST00000400301 PCDHGC5Q9Y5F6 944 aa19.79■□□□□ 0.76
USP48-204ENST00000400301 BASP1P80723 227 aaKnown RBP19.78■□□□□ 0.76
USP48-204ENST00000400301 LRRC14Q15048 493 aa19.78■□□□□ 0.76
USP48-204ENST00000400301 RBM41Q96IZ5 413 aaKnown RBP19.78■□□□□ 0.76
USP48-204ENST00000400301 TMEM8AQ9HCN3 771 aa19.78■□□□□ 0.76
USP48-204ENST00000400301 CYP3A7-CYP3A51PA0A087WV96 503 aa19.78■□□□□ 0.76
USP48-204ENST00000400301 MUTP22033 750 aa19.78■□□□□ 0.76
USP48-204ENST00000400301 CYP3A7P24462 503 aa19.78■□□□□ 0.76
USP48-204ENST00000400301 E2F5Q15329 346 aa19.78■□□□□ 0.76
USP48-204ENST00000400301 MAPK6Q16659 721 aa19.78■□□□□ 0.76
USP48-204ENST00000400301 TSEN2Q8NCE0 465 aaKnown RBP19.78■□□□□ 0.76
USP48-204ENST00000400301 SLC20A1Q8WUM9 679 aa19.78■□□□□ 0.76
USP48-204ENST00000400301 MCUR1Q96AQ8 359 aa19.78■□□□□ 0.76
USP48-204ENST00000400301 TTYH3Q9C0H2 523 aa19.78■□□□□ 0.76
USP48-204ENST00000400301 CASZ1Q86V15 1759 aa19.78■□□□□ 0.76
USP48-204ENST00000400301 SGPL1O95470 568 aa19.78■□□□□ 0.76
USP48-204ENST00000400301 MAP2K2P36507 400 aa19.78■□□□□ 0.76
USP48-204ENST00000400301 BBS9Q3SYG4 887 aa19.78■□□□□ 0.76
USP48-204ENST00000400301 ATG4CQ96DT6 458 aa19.78■□□□□ 0.76
USP48-204ENST00000400301 AKT3Q9Y243 479 aa19.78■□□□□ 0.76
USP48-204ENST00000400301 A0A1B0GUA9 196 aa19.78■□□□□ 0.76
USP48-204ENST00000400301 CA4P22748 312 aa19.78■□□□□ 0.76
USP48-204ENST00000400301 FECHP22830 423 aa19.78■□□□□ 0.76
USP48-204ENST00000400301 PSMA2P25787 234 aa19.78■□□□□ 0.76
USP48-204ENST00000400301 DCPSQ96C86 337 aaKnown RBP19.78■□□□□ 0.76
USP48-204ENST00000400301 MIS12Q9H081 205 aa19.78■□□□□ 0.76
USP48-204ENST00000400301 A0A0A6YYK5 440 aaPredicted RBP19.77■□□□□ 0.76
USP48-204ENST00000400301 I3L4J1 428 aa19.77■□□□□ 0.76
USP48-204ENST00000400301 M0R2N6 131 aa19.77■□□□□ 0.76
USP48-204ENST00000400301 TBXAS1P24557 533 aaPredicted RBP19.77■□□□□ 0.76
USP48-204ENST00000400301 GUCY2CP25092 1073 aa19.77■□□□□ 0.76
USP48-204ENST00000400301 XKR3Q5GH77 459 aa19.77■□□□□ 0.76
USP48-204ENST00000400301 GANQ9H2C0 597 aa19.77■□□□□ 0.76
USP48-204ENST00000400301 KCTD10Q9H3F6 313 aa19.77■□□□□ 0.76
USP48-204ENST00000400301 BRAFP15056 766 aa19.77■□□□□ 0.76
USP48-204ENST00000400301 CLNS1AP54105 237 aaKnown RBP19.77■□□□□ 0.76
USP48-204ENST00000400301 SURF1Q15526 300 aa19.77■□□□□ 0.76
USP48-204ENST00000400301 CCDC62Q6P9F0 684 aa19.77■□□□□ 0.76
USP48-204ENST00000400301 MAP7D3Q8IWC1 876 aa19.77■□□□□ 0.76
USP48-204ENST00000400301 MOV10L1Q9BXT6 1211 aaKnown RBP19.77■□□□□ 0.76
USP48-204ENST00000400301 ANKEF1Q9NU02 776 aa19.77■□□□□ 0.76
USP48-204ENST00000400301 TBX20Q9UMR3 447 aa19.77■□□□□ 0.76
USP48-204ENST00000400301 MCF2LO15068 1137 aa19.77■□□□□ 0.75
USP48-204ENST00000400301 MYBL1P10243 752 aa19.77■□□□□ 0.75
USP48-204ENST00000400301 RASSF2P50749 326 aa19.77■□□□□ 0.75
USP48-204ENST00000400301 CAV1Q03135 178 aa19.77■□□□□ 0.75
USP48-204ENST00000400301 AGBL2Q5U5Z8 902 aa19.77■□□□□ 0.75
USP48-204ENST00000400301 VPS52Q8N1B4 723 aa19.77■□□□□ 0.75
USP48-204ENST00000400301 KCTD6Q8NC69 237 aa19.77■□□□□ 0.75
USP48-204ENST00000400301 STMN2Q93045 179 aa19.77■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms