RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 RASGRF2O14827 1237 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 ZC3H11AO75152 810 aaKnown RBP eCLIP11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 IMPDH2P12268 514 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 HARS2P49590 506 aaKnown RBP11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 SYMPKQ92797 1274 aaKnown RBP11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 PCDHGB4Q9UN71 923 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 PPIEQ9UNP9 301 aaKnown RBP11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 OPLAHO14841 1288 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 NCF2P19878 526 aaPredicted RBP11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 CDK17Q00537 523 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 CUL3Q13618 768 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 SGO2Q562F6 1265 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 TTLL11Q8NHH1 800 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 A0A087WUV0 522 aaPredicted RBP11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 H2AFZP0C0S5 128 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 HIRAP54198 1017 aaPredicted RBP11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 H2AFVQ71UI9 128 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 SAMD7Q7Z3H4 446 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 ARHGAP18Q8N392 663 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 RFWD2Q8NHY2 731 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 TTC8Q8TAM2 541 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 SPATA31A6Q5VVP1 1343 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 WDR91A4D1P6 747 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 SLC16A4O15374 487 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 POU5F1BQ06416 359 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 MCPH1Q8NEM0 835 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 KDM4CQ9H3R0 1056 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 SAR1BQ9Y6B6 198 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 DCTN3O75935 186 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 PLA2G4BP0C869 781 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 MBL2P11226 248 aaPredicted RBP11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 HSD3B2P26439 372 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 PBLDP30039 288 aaPredicted RBP11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 TWF1Q12792 350 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 ART3Q13508 389 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 ATG16L1Q676U5 607 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 LLGL2Q6P1M3 1020 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 PHACTR4Q8IZ21 702 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 DCP1BQ8IZD4 617 aaKnown RBP11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 CAMKK1Q8N5S9 505 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 LRRC8CQ8TDW0 803 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 SYCE1LA8MT33 242 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 ERVV-1B6SEH8 477 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 PSMD14O00487 310 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 SULT1E1P49888 294 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 TRIP13Q15645 432 aaPredicted RBP11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 TDRD10Q5VZ19 366 aaKnown RBP11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 OR6P1Q8NGX9 317 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 HES6Q96HZ4 224 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 EPC1Q9H2F5 836 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 AIPL1Q9NZN9 384 aa11.61□□□□□ -0.55
CACNA1C-216ENST00000399638 H7C4K7 107 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 CDH18Q13634 790 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 COG2Q14746 738 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 E2F5Q15329 346 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 TMED2Q15363 201 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 CCDC142Q17RM4 750 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 L3MBTL3Q96JM7 780 aaPredicted RBP11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 APOL5Q9BWW9 433 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 ECT2Q9H8V3 914 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 PAIP2BQ9ULR5 123 aaKnown RBP11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 A0A0D9SFI3 127 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 MAP2K2P36507 400 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 ADKP55263 362 aaKnown RBP11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 SLC44A4Q53GD3 710 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 C10orf120Q5SQS8 335 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 MPP4Q96JB8 637 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 BPIFA3Q9BQP9 254 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 CD209Q9NNX6 404 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 ASNSD1Q9NWL6 643 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 CHCHD3Q9NX63 227 aaKnown RBP11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 GTSE1Q9NYZ3 720 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 SCINQ9Y6U3 715 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 SETBP1Q9Y6X0 1596 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 FGAP02671 866 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 NCALDP61601 193 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 TMEM132DQ14C87 1099 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 MMS22LQ6ZRQ5 1243 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 MRPS31Q92665 395 aaKnown RBP11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 CENPTQ96BT3 561 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 EMILIN2Q9BXX0 1053 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 OSBPL5Q9H0X9 879 aaPredicted RBP11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 SLC9A2Q9UBY0 812 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 NCKAP1Q9Y2A7 1128 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 RRP15Q9Y3B9 282 aaKnown RBP11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 TET3O43151 1660 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 HIST1H2AGP0C0S8 130 aaPredicted RBP11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 HIST1H2ADP20671 130 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 CTNNA1P35221 906 aaKnown RBP11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 RASSF7Q02833 373 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 RNF149Q8NC42 400 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 THOC1Q96FV9 657 aaKnown RBP11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 HIST1H2AHQ96KK5 128 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 HIST1H2AJQ99878 128 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 H2AFJQ9BTM1 129 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 FAM129AQ9BZQ8 928 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 ABI2Q9NYB9 513 aaPredicted RBP11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 SEL1LQ9UBV2 794 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 GPR1P46091 355 aa11.6□□□□□ -0.55
CACNA1C-216ENST00000399638 LRRC74AQ0VAA2 488 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms