RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 LY9Q9HBG7 655 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.15□□□□□ -0.78
SMAD9-203ENST00000399275 DDX25Q9UHL0 483 aaKnown RBP10.15□□□□□ -0.78
SMAD9-203ENST00000399275 SYNGAP1Q96PV0 1343 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 TRIM49BA6NDI0 452 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 MIF4GDA9UHW6 222 aaKnown RBP10.15□□□□□ -0.78
SMAD9-203ENST00000399275 APOL1O14791 398 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 HSPA1AP0DMV8 641 aaKnown RBP10.15□□□□□ -0.78
SMAD9-203ENST00000399275 HSPA1BP0DMV9 641 aaKnown RBP10.15□□□□□ -0.78
SMAD9-203ENST00000399275 POLR2EP19388 210 aaKnown RBP10.15□□□□□ -0.78
SMAD9-203ENST00000399275 HSPA13P48723 471 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 TMPRSS15P98073 1019 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 TSHZ1Q6ZSZ6 1077 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 RHOT2Q8IXI1 618 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 ZCCHC7Q8N3Z6 543 aaKnown RBP10.15□□□□□ -0.78
SMAD9-203ENST00000399275 DCLK2Q8N568 766 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 SDR42E1Q8WUS8 393 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 ZKSCAN4Q969J2 545 aaPredicted RBP10.15□□□□□ -0.78
SMAD9-203ENST00000399275 SH3KBP1Q96B97 665 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 CHID1Q9BWS9 393 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 AZI2Q9H6S1 392 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 PRDM16Q9HAZ2 1276 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 TMEM2Q9UHN6 1383 aa10.15□□□□□ -0.79
SMAD9-203ENST00000399275 ESYT3A0FGR9 886 aa10.15□□□□□ -0.79
SMAD9-203ENST00000399275 GYPCP04921 128 aa10.15□□□□□ -0.79
SMAD9-203ENST00000399275 GFPT1Q06210 699 aaPredicted RBP10.15□□□□□ -0.79
SMAD9-203ENST00000399275 DPYDQ12882 1025 aa10.15□□□□□ -0.79
SMAD9-203ENST00000399275 DNAL1Q4LDG9 190 aa10.15□□□□□ -0.79
SMAD9-203ENST00000399275 SGO2Q562F6 1265 aa10.15□□□□□ -0.79
SMAD9-203ENST00000399275 UNC13DQ70J99 1090 aa10.15□□□□□ -0.79
SMAD9-203ENST00000399275 PASD1Q8IV76 773 aa10.15□□□□□ -0.79
SMAD9-203ENST00000399275 ZIM3Q96PE6 472 aa10.15□□□□□ -0.79
SMAD9-203ENST00000399275 SETDB2Q96T68 719 aa10.15□□□□□ -0.79
SMAD9-203ENST00000399275 TINF2Q9BSI4 451 aa10.15□□□□□ -0.79
SMAD9-203ENST00000399275 NRKQ7Z2Y5 1582 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 SOS2Q07890 1332 aaPredicted RBP10.14□□□□□ -0.79
SMAD9-203ENST00000399275 C1orf232A0A0U1RR37 186 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 RBM47A0AV96 593 aaKnown RBP10.14□□□□□ -0.79
SMAD9-203ENST00000399275 PRR23AA6NEV1 266 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.14□□□□□ -0.79
SMAD9-203ENST00000399275 KLRF2D3W0D1 207 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 CFAP99D6REC4 459 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 NCK2O43639 380 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 SASH3O75995 380 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 APOA4P06727 396 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 PYGLP06737 847 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 ZNF806P0C7X5 589 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 PSMA4P25789 261 aaKnown RBP10.14□□□□□ -0.79
SMAD9-203ENST00000399275 CAV1Q03135 178 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 CCDC142Q17RM4 750 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 RNF19BQ6ZMZ0 732 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 CYB5R4Q7L1T6 521 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 TRMT1LQ7Z2T5 733 aaKnown RBP10.14□□□□□ -0.79
SMAD9-203ENST00000399275 SH2D3CQ8N5H7 860 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 MLPHQ9BV36 600 aaPredicted RBP10.14□□□□□ -0.79
SMAD9-203ENST00000399275 CYLDQ9NQC7 956 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 ADAMTS1Q9UHI8 967 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 L3MBTL1Q9Y468 752 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.14□□□□□ -0.79
SMAD9-203ENST00000399275 MROH7-TTC4A0A0A0MT08 1334 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 ADGRB2O60241 1585 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 ZNF185O15231 689 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 ATP6V1G2O95670 118 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 AGTP01019 485 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 SRGNP10124 158 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 IL10P22301 178 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 PHKA1P46020 1223 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 ALX1Q15699 326 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 EPM2AIP1Q7L775 607 aaPredicted RBP10.14□□□□□ -0.79
SMAD9-203ENST00000399275 TBC1D10CQ8IV04 446 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 ATL2Q8NHH9 583 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 MTBPQ96DY7 904 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 ABCF3Q9NUQ8 709 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 SERPINB13Q9UIV8 391 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 TMCO1Q9UM00 188 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 PVALEFA0A1B0GWK0 134 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 A0A1W2PQJ5 194 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 TSPAN4O14817 238 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 HNRNPRO43390 633 aaKnown RBP10.14□□□□□ -0.79
SMAD9-203ENST00000399275 ATP9AO75110 1047 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 GYS1P13807 737 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 KCNA6P17658 529 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 CDC27P30260 824 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 PSMC2P35998 433 aaKnown RBP10.14□□□□□ -0.79
SMAD9-203ENST00000399275 RGS21Q2M5E4 152 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 DCUN1D2Q6PH85 259 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 GALNT4Q8N4A0 578 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 POMGNT1Q8WZA1 660 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 CITED4Q96RK1 184 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 CHP1Q99653 195 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 CEP44Q9C0F1 390 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 ADA2Q9NZK5 511 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 PITPNM2Q9BZ72 1349 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 TRIM24O15164 1050 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 CALB1P05937 261 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 AARSP49588 968 aaKnown RBP eCLIP10.14□□□□□ -0.79
SMAD9-203ENST00000399275 MESDQ14696 234 aa10.14□□□□□ -0.79
SMAD9-203ENST00000399275 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.14□□□□□ -0.79
SMAD9-203ENST00000399275 RPRD1BQ9NQG5 326 aaKnown RBP10.14□□□□□ -0.79
SMAD9-203ENST00000399275 KCNG1Q9UIX4 513 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms