RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 ARHGEF9O43307 516 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 FTLP02792 175 aaPredicted RBP8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 CYP2C19P33261 490 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 POLE2P56282 527 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 HDLBPQ00341 1268 aaKnown RBP8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 DPYDQ12882 1025 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 PDCLQ13371 301 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 SLC12A1Q13621 1099 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 PIGHQ14442 188 aaPredicted RBP8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 KRT33BQ14525 404 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 RBBP7Q16576 425 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 RABL6Q3YEC7 729 aaPredicted RBP8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 ICE2Q659A1 982 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 XRRA1Q6P2D8 792 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 C16orf87Q6PH81 154 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 SGSM3Q96HU1 749 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 TNIP3Q96KP6 325 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 NLRP4Q96MN2 994 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 MMP19Q99542 508 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 FAM213AQ9BRX8 229 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 ING2Q9H160 280 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 MAP3K20Q9NYL2 800 aaKnown RBP8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 BFARQ9NZS9 450 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 RHOBTB3O94955 611 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 TRIM28Q13263 835 aaKnown RBP8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 TMED1Q13445 227 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 SNX17Q15036 470 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 UGP2Q16851 508 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 ANO4Q32M45 955 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 EDRF1Q3B7T1 1238 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 CYFIP1Q7L576 1253 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 SETD3Q86TU7 594 aaPredicted RBP8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 STAG2Q8N3U4 1231 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 TBC1D19Q8N5T2 526 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 MMTAG2Q9BU76 263 aaKnown RBP8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 PPME1Q9Y570 386 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 GH2P01242 217 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 BRAFP15056 766 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 MUTP22033 750 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 FOXO4P98177 505 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 KRT17Q04695 432 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 GPS1Q13098 491 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 CDO1Q16878 200 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 TXNRD1Q16881 649 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 SPATA21Q7Z572 469 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 PRUNE1Q86TP1 453 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 LRRC43Q8N309 656 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 LXNQ9BS40 222 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 EHD2Q9NZN4 543 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 FRMD3A2A2Y4 597 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 POTEMA6NI47 508 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 RASSF10A6NK89 507 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 MAN1A2O60476 641 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 E2F6O75461 281 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 RXRBP28702 533 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 GPR162Q16538 588 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 TRAPPC11Q7Z392 1133 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 RDM1Q8NG50 284 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 SCFD1Q8WVM8 642 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 SLC9A2Q9UBY0 812 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 USP17L10C9JJH3 530 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 PSMD14O00487 310 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 SLC16A4O15374 487 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 IGKV5-2P06315 115 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 CDH2P19022 906 aaPredicted RBP8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 GCLMP48507 274 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 HSPA13P48723 471 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 SLC18A3Q16572 532 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 NFRKBQ6P4R8 1299 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 OTUB1Q96FW1 271 aaPredicted RBP8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 NAF1Q96HR8 494 aaKnown RBP8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 SENP7Q9BQF6 1050 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 NEUROG2Q9H2A3 272 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 CD209Q9NNX6 404 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 NGRNQ9NPE2 291 aaKnown RBP8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 OLFML3Q9NRN5 406 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 ITSN1Q15811 1721 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 PRAMEF22A3QJZ6 481 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 E5RI56 91 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 CDC27P30260 824 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 MDH1P40925 334 aaKnown RBP8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 ADCY1Q08828 1119 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 HIC1Q14526 733 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 HIF1AQ16665 826 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 DUOXA2Q1HG44 320 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 STX19Q8N4C7 294 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 DCLK2Q8N568 766 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 MKNK1Q9BUB5 465 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 PSMC3IPQ9P2W1 217 aaPredicted RBP8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 APEX2Q9UBZ4 518 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 KLHL2O95198 593 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 KRT8P05787 483 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 ACADSBP45954 432 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 MXD4Q14582 209 aaPredicted RBP8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 SLC10A5Q5PT55 438 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 SHC4Q6S5L8 630 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 ANKS3Q6ZW76 656 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 ZBED8Q8IZ13 594 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 SAMD3Q8N6K7 520 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 SLC10A4Q96EP9 437 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms