RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 FMO2Q99518 471 aa10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 AMNQ9BXJ7 453 aa10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 PACSIN1Q9BY11 444 aa10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 SEMA6BQ9H3T3 888 aa10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 COL20A1Q9P218 1284 aa10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 UTP11Q9Y3A2 253 aaKnown RBP10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 TLR2O60603 784 aa10.88□□□□□ -0.67
HMGCLL1-205ENST00000398661 ITGA4P13612 1032 aa10.88□□□□□ -0.67
HMGCLL1-205ENST00000398661 CALB2P22676 271 aa10.88□□□□□ -0.67
HMGCLL1-205ENST00000398661 TXKP42681 527 aa10.88□□□□□ -0.67
HMGCLL1-205ENST00000398661 RAD23BP54727 409 aa10.88□□□□□ -0.67
HMGCLL1-205ENST00000398661 KLC1Q07866 573 aa10.88□□□□□ -0.67
HMGCLL1-205ENST00000398661 SLC18A3Q16572 532 aa10.88□□□□□ -0.67
HMGCLL1-205ENST00000398661 LRRC23Q53EV4 343 aaPredicted RBP10.88□□□□□ -0.67
HMGCLL1-205ENST00000398661 NSMFQ6X4W1 530 aa10.88□□□□□ -0.67
HMGCLL1-205ENST00000398661 APBB1IPQ7Z5R6 666 aaPredicted RBP10.88□□□□□ -0.67
HMGCLL1-205ENST00000398661 RAB3IPQ96QF0 476 aaPredicted RBP10.88□□□□□ -0.67
HMGCLL1-205ENST00000398661 RPS6KC1Q96S38 1066 aa10.88□□□□□ -0.67
HMGCLL1-205ENST00000398661 EPB41L4BQ9H329 900 aa10.88□□□□□ -0.67
HMGCLL1-205ENST00000398661 RNPEPL1Q9HAU8 725 aa10.88□□□□□ -0.67
HMGCLL1-205ENST00000398661 NLRC4Q9NPP4 1024 aa10.88□□□□□ -0.67
HMGCLL1-205ENST00000398661 ZMYND8Q9ULU4 1186 aaPredicted RBP10.88□□□□□ -0.67
HMGCLL1-205ENST00000398661 SMIM23A6NLE4 172 aa10.88□□□□□ -0.67
HMGCLL1-205ENST00000398661 AGTP01019 485 aa10.88□□□□□ -0.67
HMGCLL1-205ENST00000398661 UBA7P41226 1012 aa10.88□□□□□ -0.67
HMGCLL1-205ENST00000398661 TECP42680 631 aa10.88□□□□□ -0.67
HMGCLL1-205ENST00000398661 CNGA2Q16280 664 aa10.88□□□□□ -0.67
HMGCLL1-205ENST00000398661 DTHD1Q6ZMT9 781 aa10.88□□□□□ -0.67
HMGCLL1-205ENST00000398661 LRRC15Q8TF66 581 aa10.88□□□□□ -0.67
HMGCLL1-205ENST00000398661 SYN2Q92777 582 aaPredicted RBP10.88□□□□□ -0.67
HMGCLL1-205ENST00000398661 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.88□□□□□ -0.67
HMGCLL1-205ENST00000398661 CELF4Q9BZC1 486 aaKnown RBP10.88□□□□□ -0.67
HMGCLL1-205ENST00000398661 TRIM7Q9C029 511 aa10.88□□□□□ -0.67
HMGCLL1-205ENST00000398661 RXFP1Q9HBX9 757 aa10.88□□□□□ -0.67
HMGCLL1-205ENST00000398661 PCMTD2Q9NV79 361 aa10.88□□□□□ -0.67
HMGCLL1-205ENST00000398661 A0A087X0T9 212 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 POTEMA6NI47 508 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 O00370 1275 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 GJB6O95452 261 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 FAM228BP0C875 321 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 CALML3P27482 149 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 PEX5P50542 639 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 PMS2P54278 862 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 POLE2P56282 527 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 ASIC1P78348 528 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 KCNMA1Q12791 1236 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 DYNC1I2Q13409 638 aaKnown RBP10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 RNF220Q5VTB9 566 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 DENND2CQ68D51 928 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 CENPPQ6IPU0 288 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 FITM2Q8N6M3 262 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 METTL13Q8N6R0 699 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 ATL2Q8NHH9 583 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 IL31RAQ8NI17 732 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 ATP8B4Q8TF62 1192 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 KIFAP3Q92845 792 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 CCSER1Q9C0I3 900 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 CEP72Q9P209 647 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 G3BP2Q9UN86 482 aaKnown RBP10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 ARL2BPQ9Y2Y0 163 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 ABCB11O95342 1321 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 VWA5AO00534 786 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 PEX11AO75192 247 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 CCNB1P14635 433 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 ACADSP16219 412 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 GNA11P29992 359 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 STAT3P40763 770 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 RFC5P40937 340 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 IREB2P48200 963 aaKnown RBP10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 FSTL1Q12841 308 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 TMEM132BQ14DG7 1078 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 NONOQ15233 471 aaKnown RBP eCLIP10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 C6orf118Q5T5N4 469 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 SDCCAG8Q86SQ7 713 aaPredicted RBP10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 SLC17A8Q8NDX2 589 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 NEK9Q8TD19 979 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 DTNBP1Q96EV8 351 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 TRIM51Q9BSJ1 452 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 TRIM31Q9BZY9 425 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 TRIM9Q9C026 710 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 VCXQ9H320 206 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 PABPC3Q9H361 631 aaKnown RBP10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 RIC8AQ9NPQ8 531 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 FGFR1OP2Q9NVK5 253 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 DLGAP2Q9P1A6 1054 aa10.87□□□□□ -0.67
HMGCLL1-205ENST00000398661 PITPNM2Q9BZ72 1349 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 RANBP2P49792 3224 aaKnown RBP10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 BTNL10A8MVZ5 291 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 TCP11X1B4DZS4 312 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 FAM86B1E9PN63 330 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 FAM86B2P0C5J1 330 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 TPBGLP0DKB5 382 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 ZBTB48P10074 688 aaPredicted RBP10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 IMPDH2P12268 514 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 SKIV2L2P42285 1042 aaKnown RBP10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 HTRA3P83110 453 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 USP4Q13107 963 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 PTPROQ16827 1216 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 TSNAXIP1Q2TAA8 658 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms