RNA–Protein interactions for RNA: ENST00000398636.7

SFTPA1-201, Transcript of surfactant protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFTPA1, Length 2,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-201ENST00000398636 NOC3LQ8WTT2 800 aaKnown RBP11.33□□□□□ -0.6
SFTPA1-201ENST00000398636 DHTKD1Q96HY7 919 aaPredicted RBP11.33□□□□□ -0.6
SFTPA1-201ENST00000398636 RPGRIP1Q96KN7 1286 aa11.33□□□□□ -0.6
SFTPA1-201ENST00000398636 DUSP9Q99956 384 aaKnown RBP11.33□□□□□ -0.6
SFTPA1-201ENST00000398636 TUBGCP2Q9BSJ2 902 aa11.33□□□□□ -0.6
SFTPA1-201ENST00000398636 TTYH3Q9C0H2 523 aa11.33□□□□□ -0.6
SFTPA1-201ENST00000398636 BHMT2Q9H2M3 363 aa11.33□□□□□ -0.6
SFTPA1-201ENST00000398636 DHX33Q9H6R0 707 aaKnown RBP11.33□□□□□ -0.6
SFTPA1-201ENST00000398636 SETD4Q9NVD3 440 aa11.33□□□□□ -0.6
SFTPA1-201ENST00000398636 SEPT9Q9UHD8 586 aaPredicted RBP11.33□□□□□ -0.6
SFTPA1-201ENST00000398636 GTF2IRD1Q9UHL9 959 aa11.33□□□□□ -0.6
SFTPA1-201ENST00000398636 CAPN6Q9Y6Q1 641 aa11.33□□□□□ -0.6
SFTPA1-201ENST00000398636 COL1A2P08123 1366 aa11.33□□□□□ -0.6
SFTPA1-201ENST00000398636 NRCAMQ92823 1304 aa11.33□□□□□ -0.6
SFTPA1-201ENST00000398636 KRT86O43790 486 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 MAFO75444 373 aaPredicted RBP11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 CHRM1P11229 460 aaPredicted RBP11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 CXCR5P32302 372 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 FNTAP49354 379 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 MNAT1P51948 309 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 KRT83P78385 493 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 MKRN4PQ13434 485 aaPredicted RBP11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 GRIK4Q16099 956 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 C1orf53Q5VUE5 145 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 KCTD16Q68DU8 428 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 RINT1Q6NUQ1 792 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 ZNF662Q6ZS27 426 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 C1orf186Q6ZWK4 172 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 OTUD6AQ7L8S5 288 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 MMGT1Q8N4V1 131 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 CSGALNACT2Q8N6G5 542 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 LMBR1Q8WVP7 490 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 LARP4BQ92615 738 aaKnown RBP11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 ZBTB10Q96DT7 871 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 PAWRQ96IZ0 340 aaKnown RBP11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 CDK5RAP3Q96JB5 506 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 FAM107BQ9H098 131 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 CUEDC2Q9H467 287 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 XPNPEP1Q9NQW7 623 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 STARD7Q9NQZ5 370 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 TRPC6Q9Y210 931 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 ARVCFO00192 962 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 C22orf31O95567 290 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 CYP11B2P19099 503 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 ATP1A2P50993 1020 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 ZNF200P98182 395 aaPredicted RBP11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 PTPN11Q06124 597 aaPredicted RBP11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 MTERF2Q49AM1 385 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 XKR9Q5GH70 373 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 GDF6Q6KF10 455 aaPredicted RBP11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 CEP170P1Q96L14 293 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 TRIM9Q9C026 710 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 SENP6Q9GZR1 1112 aaPredicted RBP11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 MAGEF1Q9HAY2 307 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 EXOC1Q9NV70 894 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 SNX12Q9UMY4 172 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 PPME1Q9Y570 386 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 CAPN7Q9Y6W3 813 aa11.32□□□□□ -0.6
SFTPA1-201ENST00000398636 MYMKA6NI61 221 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 RRN3P2A6NIE6 340 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 NCK2O43639 380 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 CCNE1P24864 410 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 TBC1D8BQ0IIM8 1120 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 PADI6Q6TGC4 694 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 MTHFD1LQ6UB35 978 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 SLC39A5Q6ZMH5 540 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 C7orf31Q8N865 590 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 RETREG2Q8NC44 543 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 SPATA4Q8NEY3 305 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 P2RX5Q93086 422 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 NUP58Q9BVL2 599 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 RUSC1Q9BVN2 902 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 LOXHD1Q8IVV2 1947 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 ANO9A1A5B4 782 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 GOLGA8KD6RF30 607 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 TREHO43280 583 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 MOCS3O95396 460 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 TRIM21P19474 475 aaKnown RBP11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 KLRC1P26715 233 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 APBA1Q02410 837 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 STK4Q13043 487 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 MAPK7Q13164 816 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 ANKRD40Q6AI12 368 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 CNNM4Q6P4Q7 775 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 CCDC91Q7Z6B0 441 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 CNPY4Q8N129 248 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 DAW1Q8N136 415 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 SECISBP2LQ93073 1101 aaKnown RBP11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 DNAJC19Q96DA6 116 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 C7orf25Q9BPX7 421 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 SEZ6LQ9BYH1 1024 aa11.31□□□□□ -0.6
SFTPA1-201ENST00000398636 TRIP12Q14669 1992 aaPredicted RBP11.3□□□□□ -0.6
SFTPA1-201ENST00000398636 BICDL2A1A5D9 508 aa11.3□□□□□ -0.6
SFTPA1-201ENST00000398636 C17orf102A2RUQ5 167 aa11.3□□□□□ -0.6
SFTPA1-201ENST00000398636 DGAT1O75907 488 aa11.3□□□□□ -0.6
SFTPA1-201ENST00000398636 CD4P01730 458 aa11.3□□□□□ -0.6
SFTPA1-201ENST00000398636 CYLC1P35663 651 aaPredicted RBP11.3□□□□□ -0.6
SFTPA1-201ENST00000398636 IGBP1P78318 339 aa11.3□□□□□ -0.6
SFTPA1-201ENST00000398636 SKOR1P84550 965 aa11.3□□□□□ -0.6
SFTPA1-201ENST00000398636 DRP2Q13474 957 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms