RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 ADAM33Q9BZ11 813 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 DDX28Q9NUL7 540 aaKnown RBP12.48□□□□□ -0.41
TMF1-201ENST00000398559 DBR1Q9UK59 544 aaKnown RBP12.48□□□□□ -0.41
TMF1-201ENST00000398559 LZTS1Q9Y250 596 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 ARHGAP31Q2M1Z3 1444 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 LRRC36Q1X8D7 754 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 ANO4Q32M45 955 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 LRRC31Q6UY01 552 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 TTC30BQ8N4P2 665 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 ZBTB12Q9Y330 459 aaPredicted RBP12.48□□□□□ -0.41
TMF1-201ENST00000398559 PBRM1Q86U86 1689 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 LOC102724159A0A0B4J2E5 919 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 UBA6A0AVT1 1052 aaPredicted RBP12.47□□□□□ -0.41
TMF1-201ENST00000398559 NT5C2P49902 561 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 PWP2Q15269 919 aaKnown RBP12.47□□□□□ -0.41
TMF1-201ENST00000398559 GPR162Q16538 588 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 RABGAP1LQ5R372 815 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 SYCP2LQ5T4T6 812 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 TAGAPQ8N103 731 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 GANCQ8TET4 914 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 CEP95Q96GE4 821 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 TRIM51Q9BSJ1 452 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 PHF20L1A8MW92 1017 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 APOL1O14791 398 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 CCZ1BP86790 482 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 CCZ1P86791 482 aaPredicted RBP12.47□□□□□ -0.41
TMF1-201ENST00000398559 METTL16Q86W50 562 aaKnown RBP12.47□□□□□ -0.41
TMF1-201ENST00000398559 KIAA2013Q8IYS2 634 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 ADNPQ9H2P0 1102 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 SRP68Q9UHB9 627 aaKnown RBP12.47□□□□□ -0.41
TMF1-201ENST00000398559 NPHP3-ACAD11A0A0J9YXS1 232 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 PJA2O43164 708 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 RTN2O75298 545 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 CYP2C19P33261 490 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 GNL1P36915 607 aaPredicted RBP12.47□□□□□ -0.41
TMF1-201ENST00000398559 PHKA2P46019 1235 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 CDH6P55285 790 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 NFX1Q12986 1120 aaKnown RBP12.47□□□□□ -0.41
TMF1-201ENST00000398559 ORC2Q13416 577 aaPredicted RBP12.47□□□□□ -0.41
TMF1-201ENST00000398559 TRIM72Q6ZMU5 477 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 FRMD5Q7Z6J6 570 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 BEST2Q8NFU1 509 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 UNC45AQ9H3U1 944 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 TBC1D22BQ9NU19 505 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 METP08581 1390 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 PITPNM2Q9BZ72 1349 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 ZSCAN9O15535 394 aaPredicted RBP12.47□□□□□ -0.41
TMF1-201ENST00000398559 TDP2O95551 362 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 ADORA2BP29275 332 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 EIF3EP60228 445 aaKnown RBP12.47□□□□□ -0.41
TMF1-201ENST00000398559 PRAMEP78395 509 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 ATP2C1P98194 919 aaPredicted RBP12.47□□□□□ -0.41
TMF1-201ENST00000398559 STXBP2Q15833 593 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 ITPRIPL1Q6GPH6 555 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 SLC44A5Q8NCS7 719 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 ZNF507Q8TCN5 953 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 COA1Q9GZY4 146 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 POLR3FQ9H1D9 316 aaPredicted RBP12.47□□□□□ -0.41
TMF1-201ENST00000398559 CASS4Q9NQ75 786 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 ZNF302Q9NR11 478 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 NFKBIAP25963 317 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 BYSLQ13895 437 aaKnown RBP12.47□□□□□ -0.41
TMF1-201ENST00000398559 HLFQ16534 295 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 E4F1Q66K89 784 aaPredicted RBP12.47□□□□□ -0.41
TMF1-201ENST00000398559 LRIG3Q6UXM1 1119 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 SEL1LQ9UBV2 794 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 ZNF212Q9UDV6 495 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 AFF4Q9UHB7 1163 aaKnown RBP12.47□□□□□ -0.41
TMF1-201ENST00000398559 MOSPD1Q9UJG1 213 aa12.47□□□□□ -0.41
TMF1-201ENST00000398559 ATP9BO43861 1147 aa12.46□□□□□ -0.41
TMF1-201ENST00000398559 PRDX5P30044 214 aa12.46□□□□□ -0.41
TMF1-201ENST00000398559 EFHC2Q5JST6 749 aa12.46□□□□□ -0.41
TMF1-201ENST00000398559 ADGRF4Q8IZF3 695 aa12.46□□□□□ -0.41
TMF1-201ENST00000398559 EIF2AK1Q9BQI3 630 aaKnown RBP12.46□□□□□ -0.41
TMF1-201ENST00000398559 TSSK1BQ9BXA7 367 aa12.46□□□□□ -0.41
TMF1-201ENST00000398559 VIPAS39Q9H9C1 493 aa12.46□□□□□ -0.41
TMF1-201ENST00000398559 SP110Q9HB58 689 aa12.46□□□□□ -0.41
TMF1-201ENST00000398559 BFARQ9NZS9 450 aa12.46□□□□□ -0.41
TMF1-201ENST00000398559 TRIM66O15016 1216 aa12.46□□□□□ -0.41
TMF1-201ENST00000398559 ATL2Q8NHH9 583 aa12.46□□□□□ -0.41
TMF1-201ENST00000398559 PBXIP1Q96AQ6 731 aa12.46□□□□□ -0.41
TMF1-201ENST00000398559 SEC16BQ96JE7 1060 aa12.46□□□□□ -0.41
TMF1-201ENST00000398559 FAM167AQ96KS9 214 aa12.46□□□□□ -0.41
TMF1-201ENST00000398559 FAM217BQ9NTX9 383 aaPredicted RBP12.46□□□□□ -0.41
TMF1-201ENST00000398559 TRIM10Q9UDY6 481 aa12.46□□□□□ -0.41
TMF1-201ENST00000398559 FEM1BQ9UK73 627 aa12.46□□□□□ -0.41
TMF1-201ENST00000398559 STAP1Q9ULZ2 295 aa12.46□□□□□ -0.41
TMF1-201ENST00000398559 SAMD9Q5K651 1589 aa12.46□□□□□ -0.41
TMF1-201ENST00000398559 CYP26A1O43174 497 aa12.46□□□□□ -0.41
TMF1-201ENST00000398559 SLC10A5Q5PT55 438 aa12.46□□□□□ -0.41
TMF1-201ENST00000398559 GPD1LQ8N335 351 aa12.46□□□□□ -0.41
TMF1-201ENST00000398559 LXNQ9BS40 222 aa12.46□□□□□ -0.41
TMF1-201ENST00000398559 TOPORSQ9NS56 1045 aaPredicted RBP12.46□□□□□ -0.41
TMF1-201ENST00000398559 USP15Q9Y4E8 981 aaPredicted RBP12.46□□□□□ -0.41
TMF1-201ENST00000398559 PHF2O75151 1096 aa12.46□□□□□ -0.42
TMF1-201ENST00000398559 P4HBP07237 508 aaKnown RBP12.46□□□□□ -0.42
TMF1-201ENST00000398559 KCNA2P16389 499 aa12.46□□□□□ -0.42
TMF1-201ENST00000398559 CRKP46108 304 aa12.46□□□□□ -0.42
TMF1-201ENST00000398559 RCAN1P53805 252 aa12.46□□□□□ -0.42
TMF1-201ENST00000398559 P3H1Q32P28 736 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms