RNA–Protein interactions for RNA: ENST00000398073.6

CTDSP2-201, Transcript of CTD small phosphatase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP2, Length 4,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-201ENST00000398073 SPAG7O75391 227 aa17.42■□□□□ 0.38
CTDSP2-201ENST00000398073 BMP6P22004 513 aa17.42■□□□□ 0.38
CTDSP2-201ENST00000398073 KCTD2Q14681 263 aa17.42■□□□□ 0.38
CTDSP2-201ENST00000398073 NUDCD1Q96RS6 583 aa17.42■□□□□ 0.38
CTDSP2-201ENST00000398073 FAM129AQ9BZQ8 928 aa17.42■□□□□ 0.38
CTDSP2-201ENST00000398073 TRABDQ9H4I3 376 aa17.42■□□□□ 0.38
CTDSP2-201ENST00000398073 PARVAQ9NVD7 372 aa17.42■□□□□ 0.38
CTDSP2-201ENST00000398073 M0QZ92 97 aa17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 MMP10P09238 476 aa17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 SRGAP2CP0DJJ0 459 aa17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 AARSP49588 968 aaKnown RBP eCLIP17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 COL9A3Q14050 684 aaPredicted RBP17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 SLC29A2Q14542 456 aa17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 BZW1Q7L1Q6 419 aaKnown RBP17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 PRPF38AQ8NAV1 312 aaKnown RBP17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 ACTRT1Q8TDG2 376 aa17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 FAM96AQ9H5X1 160 aa17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 ASNSD1Q9NWL6 643 aa17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 P4HA2O15460 535 aa17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 KIF1CO43896 1103 aaKnown RBP17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 GSTA1P08263 222 aa17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 GSTA2P09210 222 aa17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 ARSEP51690 589 aa17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 RAD23BP54727 409 aa17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 TAF12Q16514 161 aa17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 MEA1Q16626 185 aa17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 SERPINI1Q99574 410 aa17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 SMYD2Q9NRG4 433 aa17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 HNRNPCL1O60812 293 aaKnown RBP17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 NCF2P19878 526 aaPredicted RBP17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 HP1BP3Q5SSJ5 553 aaPredicted RBP17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 CATSPER3Q86XQ3 398 aa17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 NBPF3Q9H094 633 aa17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 BATF3Q9NR55 127 aa17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 AKT3Q9Y243 479 aa17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 MYO3BQ8WXR4 1341 aa17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 IFRD2Q12894 506 aaPredicted RBP17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 GADL1Q6ZQY3 521 aa17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 THNSL1Q8IYQ7 743 aa17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 ST13P4Q8IZP2 240 aaPredicted RBP17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 RBM15Q96T37 977 aaKnown RBP eCLIP17.41■□□□□ 0.384e-7■■■■□ 23.8
CTDSP2-201ENST00000398073 TMBIM4Q9HC24 238 aa17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 RAVER2Q9HCJ3 691 aaKnown RBP17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 CYP26B1Q9NR63 512 aa17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 GABBR1Q9UBS5 961 aa17.41■□□□□ 0.38
CTDSP2-201ENST00000398073 ELF1P32519 619 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 ZNF699Q32M78 642 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 ZC2HC1CQ53FD0 456 aaPredicted RBP17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 ADGRA1Q86SQ6 560 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 LDHDQ86WU2 507 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 C7orf31Q8N865 590 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 GGT7Q9UJ14 662 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 SRGAP2BP0DMP2 458 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 MAPK7Q13164 816 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 ITPK1Q13572 414 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 ANKRD20A4Q4UJ75 823 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 ANKRD20A8PQ5CZ79 823 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 ANKRD20A2Q5SQ80 823 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 ANKRD20A1Q5TYW2 823 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 LRGUKQ96M69 825 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 CYTH2Q99418 400 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 TMEM120BA0PK00 339 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 ECE2O60344 883 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 PON1P27169 355 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 TAP1Q03518 808 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 HIF1AQ16665 826 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 CDO1Q16878 200 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 MEI1Q5TIA1 1274 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 APOBEC2Q9Y235 224 aaKnown RBP17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 LPXNO60711 386 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 MAPK6Q16659 721 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 BARGINQ6ZT62 677 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 CYFIP1Q7L576 1253 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 PPM1NQ8N819 430 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 NSUN6Q8TEA1 469 aaKnown RBP17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 MTMR8Q96EF0 704 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 C9orf72Q96LT7 481 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 FAM167BQ9BTA0 163 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 EFHD1Q9BUP0 239 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 SLC9A2Q9UBY0 812 aa17.4■□□□□ 0.38
CTDSP2-201ENST00000398073 GLI1P08151 1106 aa17.39■□□□□ 0.37
CTDSP2-201ENST00000398073 YWHABP31946 246 aaKnown RBP17.39■□□□□ 0.37
CTDSP2-201ENST00000398073 NPEPPSP55786 919 aa17.39■□□□□ 0.37
CTDSP2-201ENST00000398073 CAPRIN2Q6IMN6 1127 aaKnown RBP17.39■□□□□ 0.37
CTDSP2-201ENST00000398073 SESTD1Q86VW0 696 aa17.39■□□□□ 0.37
CTDSP2-201ENST00000398073 COL23A1Q86Y22 540 aaPredicted RBP17.39■□□□□ 0.37
CTDSP2-201ENST00000398073 CCDC117Q8IWD4 279 aaPredicted RBP17.39■□□□□ 0.37
CTDSP2-201ENST00000398073 SLC30A5Q8TAD4 765 aa17.39■□□□□ 0.37
CTDSP2-201ENST00000398073 DDX27Q96GQ7 796 aaKnown RBP17.39■□□□□ 0.37
CTDSP2-201ENST00000398073 DUSP9Q99956 384 aaKnown RBP17.39■□□□□ 0.37
CTDSP2-201ENST00000398073 POLR3CQ9BUI4 534 aaPredicted RBP17.39■□□□□ 0.37
CTDSP2-201ENST00000398073 CXorf56Q9H5V9 222 aa17.39■□□□□ 0.37
CTDSP2-201ENST00000398073 AFG3L2Q9Y4W6 797 aa17.39■□□□□ 0.37
CTDSP2-201ENST00000398073 FAM47DPA6NHR8 397 aa17.39■□□□□ 0.37
CTDSP2-201ENST00000398073 KPNA2P52292 529 aaKnown RBP17.39■□□□□ 0.37
CTDSP2-201ENST00000398073 AGGF1Q8N302 714 aaeCLIP17.39■□□□□ 0.37
CTDSP2-201ENST00000398073 PPCSQ9HAB8 311 aa17.39■□□□□ 0.37
CTDSP2-201ENST00000398073 RBAKQ9NYW8 714 aaPredicted RBP17.39■□□□□ 0.37
CTDSP2-201ENST00000398073 GRAMD1BQ3KR37 738 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms