RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 ITIH2P19823 946 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 TARSP26639 723 aaKnown RBP11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 PIK3CAP42336 1068 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 BRDTQ58F21 947 aaPredicted RBP11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 AGAP11Q8TF27 550 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 ATP8B4Q8TF62 1192 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 RBM15Q96T37 977 aaKnown RBP eCLIP11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 TRIM4Q9C037 500 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 KMT5AQ9NQR1 393 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 CCPG1Q9ULG6 757 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 PI4K2BG5E9Z4 385 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 GOLGA8RI6L899 631 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 GYG2O15488 501 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 DNAJC8O75937 253 aaPredicted RBP11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 MYCNP04198 464 aaPredicted RBP11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 CD58P19256 250 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 RASA3Q14644 834 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 SLC35G1Q2M3R5 365 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 PYROXD1Q8WU10 500 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 PIK3R5Q8WYR1 880 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 PGM2Q96G03 612 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 ADAM22Q9P0K1 906 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 SCOCQ9UIL1 159 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 SRRM3A6NNA2 597 aaPredicted RBP11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 PPEF1O14829 653 aaPredicted RBP11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 ATP5HO75947 161 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 SGPL1O95470 568 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 PYGMP11217 842 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 SKIP12755 728 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 HSPA1LP34931 641 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 PRKCIP41743 596 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 MARCKSL1P49006 195 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 LONP2Q86WA8 852 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 TEX2Q8IWB9 1127 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 ZBED8Q8IZ13 594 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 ATL2Q8NHH9 583 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 LNX1Q8TBB1 728 aaPredicted RBP11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 FBXO41Q8TF61 875 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 TTC17Q96AE7 1141 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 KCTD10Q9H3F6 313 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 TRABDQ9H4I3 376 aa11.86□□□□□ -0.51
CSGALNACT1-202ENST00000397998 TUBGCP6Q96RT7 1819 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 IPO5O00410 1097 aaKnown RBP11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 PPFIA2O75334 1257 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 BPIFB4P59827 614 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 CDR2Q01850 454 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 MKRN3Q13064 507 aaKnown RBP11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 GPS1Q13098 491 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 ACCSLQ4AC99 568 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 TMEM179Q6ZVK1 233 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 DTX3LQ8TDB6 740 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 GRAMD1AQ96CP6 724 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 TRAIPQ9BWF2 469 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 CLRN2A0PK11 232 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 FAM47DPA6NHR8 397 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 ZBTB39O15060 712 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 MT-ND3P03897 115 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 INHBAP08476 426 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 SLURP2P0DP57 97 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 BASP1P80723 227 aaKnown RBP11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 CAV1Q03135 178 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 TRPC3Q13507 836 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 LMBRD2Q68DH5 695 aaPredicted RBP11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 CENPUQ71F23 418 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 HAUS6Q7Z4H7 955 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 NLRX1Q86UT6 975 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 MORC4Q8TE76 937 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 CPA5Q8WXQ8 436 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 CYTH2Q99418 400 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 MKNK1Q9BUB5 465 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 ERVK-5Q9HDB9 667 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 GINM1Q9NU53 330 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 ANKFY1Q9P2R3 1169 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 CTNNAL1Q9UBT7 734 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 SLC12A6Q9UHW9 1150 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 HAO1Q9UJM8 370 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 C15orf41Q9Y2V0 281 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 KIAA0391O15091 583 aaKnown RBP11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 TBX3O15119 743 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 MYBL1P10243 752 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 RFX1P22670 979 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 FNTAP49354 379 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 BIRC2Q13490 618 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 STAT4Q14765 748 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 CBWD6Q4V339 395 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 CBWD3Q5JTY5 395 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 CBWD5Q5RIA9 395 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 BTNL9Q6UXG8 535 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 ALG3Q92685 438 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 SERPINB12Q96P63 405 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 POP1Q99575 1024 aaKnown RBP11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 MRPL47Q9HD33 250 aaKnown RBP11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 STOML1Q9UBI4 398 aa11.85□□□□□ -0.51
CSGALNACT1-202ENST00000397998 CAMTA1Q9Y6Y1 1673 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 MYO3BQ8WXR4 1341 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 ATXN2Q99700 1313 aaKnown RBP11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 SNX3O60493 162 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 RASSF9O75901 435 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 NDUFB10O96000 172 aa11.84□□□□□ -0.51
CSGALNACT1-202ENST00000397998 SLC12A3P55017 1021 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms