RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 ITGB3BPQ13352 177 aaPredicted RBP8.88□□□□□ -0.99
PTPRD-204ENST00000397606 LDLRAD1Q5T700 205 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 TRIM72Q6ZMU5 477 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 SPTLC3Q9NUV7 552 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 CAPN11Q9UMQ6 739 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 CASZ1Q86V15 1759 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 KCNK3O14649 394 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 FARP2O94887 1054 aaPredicted RBP8.88□□□□□ -0.99
PTPRD-204ENST00000397606 STAG3L1P0CL83 205 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 MAP3K10Q02779 954 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 C1orf186Q6ZWK4 172 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 KCNK18Q7Z418 384 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 TAX1BP1Q86VP1 789 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 PPTC7Q8NI37 304 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 MAML3Q96JK9 1138 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 ITIH6Q6UXX5 1313 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 GNA15P30679 374 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 SARSP49591 514 aaKnown RBP8.88□□□□□ -0.99
PTPRD-204ENST00000397606 TTI2Q6NXR4 508 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 SH3RF1Q7Z6J0 888 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 C4orf32Q8N8J7 132 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 ZNF507Q8TCN5 953 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 OSMRQ99650 979 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 STK33Q9BYT3 514 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 ARFGAP3Q9NP61 516 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 ADAM22Q9P0K1 906 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 COL20A1Q9P218 1284 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 STRIP2Q9ULQ0 834 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 UBQLN1Q9UMX0 589 aaKnown RBP8.88□□□□□ -0.99
PTPRD-204ENST00000397606 PCDHA13Q9Y5I0 950 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 SOX5P35711 763 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 CYP27A1Q02318 531 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 CRHR2Q13324 411 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 ZPBP2Q6X784 338 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 CEP128Q6ZU80 1094 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 ILDR2Q71H61 639 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 CEP57Q86XR8 500 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 DNAJB3Q8WWF6 145 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 SEPT8Q92599 483 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 SGIP1Q9BQI5 828 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 FAM204AQ9H8W3 233 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 VAV3Q9UKW4 847 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 CCDC88AQ3V6T2 1871 aa8.88□□□□□ -0.99
PTPRD-204ENST00000397606 CHD4Q14839 1912 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 A6NJR5 290 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 GAS8O95995 478 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 CALB1P05937 261 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 CD44P16070 742 aaKnown RBP8.87□□□□□ -0.99
PTPRD-204ENST00000397606 PNPLA4P41247 253 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 APLP1P51693 650 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 NR1I3Q14994 352 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 LONRF2Q1L5Z9 754 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 CXCL17Q6UXB2 119 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 EP400NLQ6ZTU2 488 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 TRAPPC12Q8WVT3 735 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 PDE11AQ9HCR9 933 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 SNX9Q9Y5X1 595 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 TMEM150BA6NC51 233 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 HOXA2O43364 376 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 PGK1P00558 417 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 ATN1P54259 1190 aaPredicted RBP8.87□□□□□ -0.99
PTPRD-204ENST00000397606 WHAMMP3Q1A5X7 153 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 MAATS1Q7Z4T9 603 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 RASAL3Q86YV0 1011 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 CALR3Q96L12 384 aaKnown RBP8.87□□□□□ -0.99
PTPRD-204ENST00000397606 NCAPGQ9BPX3 1015 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 CBWD1Q9BRT8 395 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 LCMT1Q9UIC8 334 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 SOWAHBA6NEL2 793 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 E7EVH7 732 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 ACKR2O00590 384 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 NDC80O14777 642 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 GNRH1P01148 92 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 HLA-DRAP01903 254 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 UCHL3P15374 230 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 AXLP30530 894 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 GTF2H1P32780 548 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 STILQ15468 1287 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 IL17AQ16552 155 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 SV2CQ496J9 727 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 HYIQ5T013 277 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 PDXDC1Q6P996 788 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 CDR2LQ86X02 465 aaPredicted RBP8.87□□□□□ -0.99
PTPRD-204ENST00000397606 SLAIN1Q8ND83 568 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 ACRBPQ8NEB7 543 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 APPL2Q8NEU8 664 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 RNF139Q8WU17 664 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 PPP1R13BQ96KQ4 1090 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 PDGFCQ9NRA1 345 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 SLC12A6Q9UHW9 1150 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 PYCARDQ9ULZ3 195 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 TRAF3IP3Q9Y228 551 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 UTP11Q9Y3A2 253 aaKnown RBP8.87□□□□□ -0.99
PTPRD-204ENST00000397606 SHANK3Q9BYB0 1731 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 SLX4Q8IY92 1834 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 ZBTB39O15060 712 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 PEX10O60683 326 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 TADA2AO75478 443 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 RHOXF2BP0C7M4 288 aa8.87□□□□□ -0.99
PTPRD-204ENST00000397606 ATP2A2P16615 1042 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms