RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 SFPQP23246 707 aaKnown RBP eCLIP23.09■■□□□ 1.298e-7■□□□□ 11.1
CPNE1-204ENST00000397443 CCDC173Q0VFZ6 552 aa23.09■■□□□ 1.29
CPNE1-204ENST00000397443 NOLC1Q14978 699 aaKnown RBP eCLIP23.09■■□□□ 1.293e-8■□□□□ 8.2
CPNE1-204ENST00000397443 MPZL3Q6UWV2 235 aa23.09■■□□□ 1.29
CPNE1-204ENST00000397443 TMC6Q7Z403 805 aa23.09■■□□□ 1.29
CPNE1-204ENST00000397443 THNSL1Q8IYQ7 743 aa23.09■■□□□ 1.29
CPNE1-204ENST00000397443 BORCS6Q96GS4 357 aa23.09■■□□□ 1.29
CPNE1-204ENST00000397443 PDZD7Q9H5P4 517 aa23.09■■□□□ 1.29
CPNE1-204ENST00000397443 TNFSF13BQ9Y275 285 aa23.09■■□□□ 1.29
CPNE1-204ENST00000397443 NOC2LQ9Y3T9 749 aaKnown RBP23.09■■□□□ 1.29
CPNE1-204ENST00000397443 EXTL3O43909 919 aa23.08■■□□□ 1.29
CPNE1-204ENST00000397443 KRT13P13646 458 aa23.08■■□□□ 1.29
CPNE1-204ENST00000397443 GJA8P48165 433 aa23.08■■□□□ 1.29
CPNE1-204ENST00000397443 CCDC127Q96BQ5 260 aa23.08■■□□□ 1.29
CPNE1-204ENST00000397443 ABLIM1O14639 778 aa23.08■■□□□ 1.28
CPNE1-204ENST00000397443 CDK7P50613 346 aa23.08■■□□□ 1.28
CPNE1-204ENST00000397443 DLG4P78352 724 aa23.08■■□□□ 1.28
CPNE1-204ENST00000397443 NCBP1Q09161 790 aaKnown RBP23.08■■□□□ 1.28
CPNE1-204ENST00000397443 KCNH2Q12809 1159 aa23.08■■□□□ 1.28
CPNE1-204ENST00000397443 ZNF618Q5T7W0 954 aa23.08■■□□□ 1.28
CPNE1-204ENST00000397443 CEP120Q8N960 986 aa23.08■■□□□ 1.28
CPNE1-204ENST00000397443 TMEM174Q8WUU8 243 aa23.08■■□□□ 1.28
CPNE1-204ENST00000397443 TMEM106CQ9BVX2 250 aa23.08■■□□□ 1.28
CPNE1-204ENST00000397443 OSBPL7Q9BZF2 842 aa23.08■■□□□ 1.28
CPNE1-204ENST00000397443 CDT1Q9H211 546 aa23.08■■□□□ 1.28
CPNE1-204ENST00000397443 PTPRHQ9HD43 1115 aa23.08■■□□□ 1.28
CPNE1-204ENST00000397443 PIN4Q9Y237 131 aaKnown RBP23.08■■□□□ 1.28
CPNE1-204ENST00000397443 PROZP22891 400 aa23.07■■□□□ 1.28
CPNE1-204ENST00000397443 TNFSF9P41273 254 aa23.07■■□□□ 1.28
CPNE1-204ENST00000397443 MCL1Q07820 350 aa23.07■■□□□ 1.28
CPNE1-204ENST00000397443 BFSP1Q12934 665 aa23.07■■□□□ 1.28
CPNE1-204ENST00000397443 TRIM71Q2Q1W2 868 aaKnown RBP23.07■■□□□ 1.28
CPNE1-204ENST00000397443 PDLIM2Q96JY6 352 aa23.07■■□□□ 1.28
CPNE1-204ENST00000397443 ZNF233A6NK53 670 aa23.06■■□□□ 1.28
CPNE1-204ENST00000397443 HOXA11P31270 313 aaPredicted RBP23.06■■□□□ 1.28
CPNE1-204ENST00000397443 MGAT3Q09327 533 aa23.06■■□□□ 1.28
CPNE1-204ENST00000397443 NFX1Q12986 1120 aaKnown RBP23.06■■□□□ 1.28
CPNE1-204ENST00000397443 FKBP15Q5T1M5 1219 aa23.06■■□□□ 1.28
CPNE1-204ENST00000397443 CRELD2Q6UXH1 353 aaPredicted RBP23.06■■□□□ 1.28
CPNE1-204ENST00000397443 INTS8Q75QN2 995 aaKnown RBP23.06■■□□□ 1.28
CPNE1-204ENST00000397443 RPAINQ86UA6 219 aa23.06■■□□□ 1.28
CPNE1-204ENST00000397443 FAM228AQ86W67 206 aa23.06■■□□□ 1.28
CPNE1-204ENST00000397443 FAM126BQ8IXS8 530 aa23.06■■□□□ 1.28
CPNE1-204ENST00000397443 PLEKHO2Q8TD55 490 aa23.06■■□□□ 1.28
CPNE1-204ENST00000397443 SLC35C1Q96A29 364 aa23.06■■□□□ 1.28
CPNE1-204ENST00000397443 RPS6KA5O75582 802 aa23.06■■□□□ 1.28
CPNE1-204ENST00000397443 DLATP10515 647 aaKnown RBP23.06■■□□□ 1.28
CPNE1-204ENST00000397443 GHRP10912 638 aa23.06■■□□□ 1.28
CPNE1-204ENST00000397443 CDC25BP30305 580 aa23.06■■□□□ 1.28
CPNE1-204ENST00000397443 VAMP7P51809 220 aa23.06■■□□□ 1.28
CPNE1-204ENST00000397443 VSTM4Q8IW00 320 aa23.06■■□□□ 1.28
CPNE1-204ENST00000397443 ZNF710Q8N1W2 664 aa23.06■■□□□ 1.28
CPNE1-204ENST00000397443 FAM212AQ96EL1 285 aa23.06■■□□□ 1.28
CPNE1-204ENST00000397443 FBXL18Q96ME1 805 aa23.06■■□□□ 1.28
CPNE1-204ENST00000397443 PCMTD1Q96MG8 357 aaPredicted RBP23.06■■□□□ 1.28
CPNE1-204ENST00000397443 POP1Q99575 1024 aaKnown RBP23.06■■□□□ 1.28
CPNE1-204ENST00000397443 PRDM10Q9NQV6 1147 aa23.06■■□□□ 1.28
CPNE1-204ENST00000397443 A0A1B0GUA9 196 aa23.05■■□□□ 1.28
CPNE1-204ENST00000397443 OGTO15294 1046 aa23.05■■□□□ 1.28
CPNE1-204ENST00000397443 LDHAP00338 332 aaKnown RBP23.05■■□□□ 1.28
CPNE1-204ENST00000397443 PTMAP06454 111 aaKnown RBP23.05■■□□□ 1.28
CPNE1-204ENST00000397443 CKBP12277 381 aa23.05■■□□□ 1.28
CPNE1-204ENST00000397443 KLK7P49862 253 aa23.05■■□□□ 1.28
CPNE1-204ENST00000397443 CYP24A1Q07973 514 aa23.05■■□□□ 1.28
CPNE1-204ENST00000397443 SLC39A5Q6ZMH5 540 aa23.05■■□□□ 1.28
CPNE1-204ENST00000397443 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.05■■□□□ 1.28
CPNE1-204ENST00000397443 PAWRQ96IZ0 340 aaKnown RBP23.05■■□□□ 1.28
CPNE1-204ENST00000397443 CRACR2AQ9BSW2 395 aa23.05■■□□□ 1.28
CPNE1-204ENST00000397443 RBAKQ9NYW8 714 aaPredicted RBP23.05■■□□□ 1.28
CPNE1-204ENST00000397443 NPTXRO95502 500 aa23.04■■□□□ 1.28
CPNE1-204ENST00000397443 AFPP02771 609 aaKnown RBP23.04■■□□□ 1.28
CPNE1-204ENST00000397443 RPLP2P05387 115 aaKnown RBP23.04■■□□□ 1.28
CPNE1-204ENST00000397443 TMEM192Q8IY95 271 aa23.04■■□□□ 1.28
CPNE1-204ENST00000397443 FAM84AQ96KN4 292 aa23.04■■□□□ 1.28
CPNE1-204ENST00000397443 ADPGKQ9BRR6 497 aa23.04■■□□□ 1.28
CPNE1-204ENST00000397443 KIAA1586Q9HCI6 787 aa23.04■■□□□ 1.28
CPNE1-204ENST00000397443 AGPAT5Q9NUQ2 364 aa23.04■■□□□ 1.28
CPNE1-204ENST00000397443 KIAA0391O15091 583 aaKnown RBP23.04■■□□□ 1.28
CPNE1-204ENST00000397443 FAM189A1O60320 539 aa23.04■■□□□ 1.28
CPNE1-204ENST00000397443 WNT7BP56706 349 aa23.04■■□□□ 1.28
CPNE1-204ENST00000397443 SYCP1Q15431 976 aa23.04■■□□□ 1.28
CPNE1-204ENST00000397443 LMBRD2Q68DH5 695 aaPredicted RBP23.04■■□□□ 1.28
CPNE1-204ENST00000397443 NOTUMQ6P988 496 aa23.04■■□□□ 1.28
CPNE1-204ENST00000397443 PPP1R9BQ96SB3 815 aa23.04■■□□□ 1.28
CPNE1-204ENST00000397443 EIF2AQ9BY44 585 aaKnown RBP23.04■■□□□ 1.28
CPNE1-204ENST00000397443 PDE11AQ9HCR9 933 aa23.04■■□□□ 1.28
CPNE1-204ENST00000397443 TOPORSQ9NS56 1045 aaPredicted RBP23.04■■□□□ 1.28
CPNE1-204ENST00000397443 ST3GAL5Q9UNP4 418 aa23.04■■□□□ 1.28
CPNE1-204ENST00000397443 CD52P31358 61 aa23.03■■□□□ 1.28
CPNE1-204ENST00000397443 TRIM60Q495X7 471 aa23.03■■□□□ 1.28
CPNE1-204ENST00000397443 MFSD14AQ96MC6 490 aa23.03■■□□□ 1.28
CPNE1-204ENST00000397443 AGO3Q9H9G7 860 aaKnown RBP23.03■■□□□ 1.28
CPNE1-204ENST00000397443 MAPK13O15264 365 aa23.02■■□□□ 1.28
CPNE1-204ENST00000397443 GCLMP48507 274 aa23.02■■□□□ 1.28
CPNE1-204ENST00000397443 FBXO47Q5MNV8 452 aa23.02■■□□□ 1.28
CPNE1-204ENST00000397443 SPECC1LQ69YQ0 1117 aa23.02■■□□□ 1.28
CPNE1-204ENST00000397443 LRRIQ3A6PVS8 624 aaPredicted RBP23.02■■□□□ 1.28
CPNE1-204ENST00000397443 MCF2P10911 925 aa23.02■■□□□ 1.28
CPNE1-204ENST00000397443 PBX1P40424 430 aa23.02■■□□□ 1.28
CPNE1-204ENST00000397443 PPP2R3AQ06190 1150 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms