RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 MEIS3P2A8K0S8 358 aa10.59□□□□□ -0.71
NEDD9-203ENST00000397378 GIPC1O14908 333 aa10.59□□□□□ -0.71
NEDD9-203ENST00000397378 SLC27A2O14975 620 aa10.59□□□□□ -0.71
NEDD9-203ENST00000397378 TGM5O43548 720 aa10.59□□□□□ -0.71
NEDD9-203ENST00000397378 B4GALT3O60512 393 aa10.59□□□□□ -0.71
NEDD9-203ENST00000397378 OFD1O75665 1012 aa10.59□□□□□ -0.71
NEDD9-203ENST00000397378 TOP3BO95985 862 aaKnown RBP10.59□□□□□ -0.71
NEDD9-203ENST00000397378 ALDH2P05091 517 aa10.59□□□□□ -0.71
NEDD9-203ENST00000397378 CIITAP33076 1130 aa10.59□□□□□ -0.71
NEDD9-203ENST00000397378 CXCL12P48061 93 aa10.59□□□□□ -0.71
NEDD9-203ENST00000397378 GLUD2P49448 558 aa10.59□□□□□ -0.71
NEDD9-203ENST00000397378 RAB27AP51159 221 aa10.59□□□□□ -0.71
NEDD9-203ENST00000397378 NTHL1P78549 312 aa10.59□□□□□ -0.71
NEDD9-203ENST00000397378 SATB1Q01826 763 aa10.59□□□□□ -0.71
NEDD9-203ENST00000397378 PRKCEQ02156 737 aa10.59□□□□□ -0.71
NEDD9-203ENST00000397378 NECTIN1Q15223 517 aa10.59□□□□□ -0.71
NEDD9-203ENST00000397378 TARBP2Q15633 366 aaKnown RBP10.59□□□□□ -0.71
NEDD9-203ENST00000397378 RTN1Q16799 776 aa10.59□□□□□ -0.71
NEDD9-203ENST00000397378 HEATR6Q6AI08 1181 aaKnown RBP10.59□□□□□ -0.71
NEDD9-203ENST00000397378 TWF2Q6IBS0 349 aaKnown RBP10.59□□□□□ -0.71
NEDD9-203ENST00000397378 URGCPQ8TCY9 931 aa10.59□□□□□ -0.71
NEDD9-203ENST00000397378 IER2Q9BTL4 223 aa10.59□□□□□ -0.71
NEDD9-203ENST00000397378 HERC2P3Q9BVR0 1158 aa10.59□□□□□ -0.71
NEDD9-203ENST00000397378 SCNM1Q9BWG6 230 aa10.59□□□□□ -0.71
NEDD9-203ENST00000397378 INO80BQ9C086 356 aaPredicted RBP10.59□□□□□ -0.71
NEDD9-203ENST00000397378 LSG1Q9H089 658 aaKnown RBP10.59□□□□□ -0.71
NEDD9-203ENST00000397378 ZMYND12Q9H0C1 365 aa10.59□□□□□ -0.71
NEDD9-203ENST00000397378 DISC1Q9NRI5 854 aa10.59□□□□□ -0.71
NEDD9-203ENST00000397378 FAM105AQ9NUU6 356 aa10.59□□□□□ -0.71
NEDD9-203ENST00000397378 ANKFY1Q9P2R3 1169 aa10.59□□□□□ -0.71
NEDD9-203ENST00000397378 SAMM50Q9Y512 469 aa10.59□□□□□ -0.71
NEDD9-203ENST00000397378 ASH1LQ9NR48 2969 aaKnown RBP10.59□□□□□ -0.71
NEDD9-203ENST00000397378 IGKV6-21A0A0C4DH24 114 aa10.58□□□□□ -0.72
NEDD9-203ENST00000397378 EIF4E1BA6NMX2 242 aaKnown RBP10.58□□□□□ -0.72
NEDD9-203ENST00000397378 NRP1O14786 923 aa10.58□□□□□ -0.72
NEDD9-203ENST00000397378 CSDE1O75534 798 aaKnown RBP10.58□□□□□ -0.72
NEDD9-203ENST00000397378 DDHD2O94830 711 aa10.58□□□□□ -0.72
NEDD9-203ENST00000397378 PAPLNO95428 1278 aa10.58□□□□□ -0.72
NEDD9-203ENST00000397378 ZNF806P0C7X5 589 aa10.58□□□□□ -0.72
NEDD9-203ENST00000397378 SFPQP23246 707 aaKnown RBP eCLIP10.58□□□□□ -0.723e-6■■■□□ 15.9
NEDD9-203ENST00000397378 DRP2Q13474 957 aa10.58□□□□□ -0.72
NEDD9-203ENST00000397378 PRR16Q569H4 304 aa10.58□□□□□ -0.72
NEDD9-203ENST00000397378 CREB3L3Q68CJ9 461 aa10.58□□□□□ -0.72
NEDD9-203ENST00000397378 RNF43Q68DV7 783 aa10.58□□□□□ -0.72
NEDD9-203ENST00000397378 TAS1R1Q7RTX1 841 aa10.58□□□□□ -0.72
NEDD9-203ENST00000397378 ZNF410Q86VK4 478 aa10.58□□□□□ -0.72
NEDD9-203ENST00000397378 LONP2Q86WA8 852 aa10.58□□□□□ -0.72
NEDD9-203ENST00000397378 LENG9Q96B70 501 aa10.58□□□□□ -0.72
NEDD9-203ENST00000397378 POLIQ9UNA4 740 aa10.58□□□□□ -0.72
NEDD9-203ENST00000397378 WASF3Q9UPY6 502 aa10.58□□□□□ -0.72
NEDD9-203ENST00000397378 PRG3Q9Y2Y8 225 aaPredicted RBP10.58□□□□□ -0.72
NEDD9-203ENST00000397378 FLNBO75369 2602 aaKnown RBP10.58□□□□□ -0.72
NEDD9-203ENST00000397378 A0A087WZ62 844 aa10.57□□□□□ -0.72
NEDD9-203ENST00000397378 MAN2B1O00754 1011 aa10.57□□□□□ -0.72
NEDD9-203ENST00000397378 ZBTB43O43298 467 aa10.57□□□□□ -0.72
NEDD9-203ENST00000397378 ZMYND10O75800 440 aa10.57□□□□□ -0.72
NEDD9-203ENST00000397378 C1RP00736 705 aa10.57□□□□□ -0.72
NEDD9-203ENST00000397378 SFNP31947 248 aa10.57□□□□□ -0.72
NEDD9-203ENST00000397378 DNM2P50570 870 aa10.57□□□□□ -0.72
NEDD9-203ENST00000397378 RCAN1P53805 252 aa10.57□□□□□ -0.72
NEDD9-203ENST00000397378 UGCGQ16739 394 aa10.57□□□□□ -0.72
NEDD9-203ENST00000397378 PFKFB3Q16875 520 aaPredicted RBP10.57□□□□□ -0.72
NEDD9-203ENST00000397378 C19orf48Q6RUI8 117 aa10.57□□□□□ -0.72
NEDD9-203ENST00000397378 MAMSTRQ6ZN01 415 aa10.57□□□□□ -0.72
NEDD9-203ENST00000397378 AGMOQ6ZNB7 445 aa10.57□□□□□ -0.72
NEDD9-203ENST00000397378 REXO1Q8N1G1 1221 aaKnown RBP10.57□□□□□ -0.72
NEDD9-203ENST00000397378 EXOC6Q8TAG9 804 aa10.57□□□□□ -0.72
NEDD9-203ENST00000397378 PGBD4Q96DM1 585 aa10.57□□□□□ -0.72
NEDD9-203ENST00000397378 CEP89Q96ST8 783 aa10.57□□□□□ -0.72
NEDD9-203ENST00000397378 RIT2Q99578 217 aa10.57□□□□□ -0.72
NEDD9-203ENST00000397378 FDXACB1Q9BRP7 624 aaPredicted RBP10.57□□□□□ -0.72
NEDD9-203ENST00000397378 TMEM175Q9BSA9 504 aa10.57□□□□□ -0.72
NEDD9-203ENST00000397378 NIFKQ9BYG3 293 aaKnown RBP10.57□□□□□ -0.72
NEDD9-203ENST00000397378 SMOC1Q9H4F8 434 aa10.57□□□□□ -0.72
NEDD9-203ENST00000397378 LMAN1LQ9HAT1 526 aa10.57□□□□□ -0.72
NEDD9-203ENST00000397378 RXFP1Q9HBX9 757 aa10.57□□□□□ -0.72
NEDD9-203ENST00000397378 KANSL3Q9P2N6 904 aa10.57□□□□□ -0.72
NEDD9-203ENST00000397378 PIN4Q9Y237 131 aaKnown RBP10.57□□□□□ -0.72
NEDD9-203ENST00000397378 SHISA7A6NL88 538 aa10.56□□□□□ -0.72
NEDD9-203ENST00000397378 ADAMTS3O15072 1205 aa10.56□□□□□ -0.72
NEDD9-203ENST00000397378 POMCP01189 267 aa10.56□□□□□ -0.72
NEDD9-203ENST00000397378 OR1G1P47890 313 aa10.56□□□□□ -0.72
NEDD9-203ENST00000397378 JAK3P52333 1124 aa10.56□□□□□ -0.72
NEDD9-203ENST00000397378 EXOSC10Q01780 885 aaKnown RBP10.56□□□□□ -0.72
NEDD9-203ENST00000397378 MRPL10Q7Z7H8 261 aaKnown RBP10.56□□□□□ -0.72
NEDD9-203ENST00000397378 PDZD3Q86UT5 571 aa10.56□□□□□ -0.72
NEDD9-203ENST00000397378 RDM1Q8NG50 284 aa10.56□□□□□ -0.72
NEDD9-203ENST00000397378 ITFG1Q8TB96 612 aa10.56□□□□□ -0.72
NEDD9-203ENST00000397378 CCDC12Q8WUD4 166 aaPredicted RBP10.56□□□□□ -0.72
NEDD9-203ENST00000397378 C6orf50Q9HD87 102 aa10.56□□□□□ -0.72
NEDD9-203ENST00000397378 MARCH5Q9NX47 278 aa10.56□□□□□ -0.72
NEDD9-203ENST00000397378 BRPF3Q9ULD4 1205 aa10.56□□□□□ -0.72
NEDD9-203ENST00000397378 PCDHB2Q9Y5E7 798 aa10.56□□□□□ -0.72
NEDD9-203ENST00000397378 CNTNAP2Q9UHC6 1331 aa10.56□□□□□ -0.72
NEDD9-203ENST00000397378 DSPP15924 2871 aaKnown RBP10.55□□□□□ -0.72
NEDD9-203ENST00000397378 GOLGA8AA7E2F4 631 aa10.55□□□□□ -0.72
NEDD9-203ENST00000397378 GOLGA8BA8MQT2 603 aa10.55□□□□□ -0.72
NEDD9-203ENST00000397378 MSH4O15457 936 aa10.55□□□□□ -0.72
NEDD9-203ENST00000397378 CCL16O15467 120 aa10.55□□□□□ -0.72
NEDD9-203ENST00000397378 GAS7O60861 476 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms