RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 DKC1O60832 514 aaKnown RBP eCLIP16.71■□□□□ 0.27
SEC13-206ENST00000397102 ERLIN2O94905 339 aa16.71■□□□□ 0.27
SEC13-206ENST00000397102 AXLP30530 894 aa16.71■□□□□ 0.27
SEC13-206ENST00000397102 RFC5P40937 340 aa16.71■□□□□ 0.27
SEC13-206ENST00000397102 MAGEA9P43362 315 aa16.71■□□□□ 0.27
SEC13-206ENST00000397102 QARSP47897 775 aaKnown RBP16.71■□□□□ 0.27
SEC13-206ENST00000397102 LAMTOR4Q0VGL1 99 aa16.71■□□□□ 0.27
SEC13-206ENST00000397102 SNW1Q13573 536 aaKnown RBP16.71■□□□□ 0.27
SEC13-206ENST00000397102 PCBP1Q15365 356 aaKnown RBP eCLIP16.71■□□□□ 0.27
SEC13-206ENST00000397102 MLF2Q15773 248 aaPredicted RBP16.71■□□□□ 0.27
SEC13-206ENST00000397102 NTRK3Q16288 839 aa16.71■□□□□ 0.27
SEC13-206ENST00000397102 MOXD1Q6UVY6 613 aa16.71■□□□□ 0.27
SEC13-206ENST00000397102 PARM1Q6UWI2 310 aa16.71■□□□□ 0.27
SEC13-206ENST00000397102 MTSS1LQ765P7 747 aa16.71■□□□□ 0.27
SEC13-206ENST00000397102 TMEM143Q96AN5 459 aa16.71■□□□□ 0.27
SEC13-206ENST00000397102 CCDC51Q96ER9 411 aa16.71■□□□□ 0.27
SEC13-206ENST00000397102 CEP170P1Q96L14 293 aa16.71■□□□□ 0.27
SEC13-206ENST00000397102 B3GALT6Q96L58 329 aa16.71■□□□□ 0.27
SEC13-206ENST00000397102 EIF2AQ9BY44 585 aaKnown RBP16.71■□□□□ 0.27
SEC13-206ENST00000397102 GPR62Q9BZJ7 368 aa16.71■□□□□ 0.27
SEC13-206ENST00000397102 RNF39Q9H2S5 420 aa16.71■□□□□ 0.27
SEC13-206ENST00000397102 SH3GLB2Q9NR46 395 aa16.71■□□□□ 0.27
SEC13-206ENST00000397102 CDH7Q9ULB5 785 aa16.71■□□□□ 0.27
SEC13-206ENST00000397102 TPRP12270 2363 aaKnown RBP16.71■□□□□ 0.26
SEC13-206ENST00000397102 PRR5-ARHGAP8B1AHC4 643 aa16.7■□□□□ 0.26
SEC13-206ENST00000397102 ASAP2O43150 1006 aa16.7■□□□□ 0.26
SEC13-206ENST00000397102 ATXN1P54253 815 aaKnown RBP16.7■□□□□ 0.26
SEC13-206ENST00000397102 NLRP5P59047 1200 aa16.7■□□□□ 0.26
SEC13-206ENST00000397102 ARHGAP8P85298 464 aa16.7■□□□□ 0.26
SEC13-206ENST00000397102 UBXN2BQ14CS0 331 aa16.7■□□□□ 0.26
SEC13-206ENST00000397102 NOTUMQ6P988 496 aa16.7■□□□□ 0.26
SEC13-206ENST00000397102 RSPO2Q6UXX9 243 aaPredicted RBP16.7■□□□□ 0.26
SEC13-206ENST00000397102 Q6ZUG5 572 aa16.7■□□□□ 0.26
SEC13-206ENST00000397102 ZNF579Q8NAF0 562 aaKnown RBP16.7■□□□□ 0.26
SEC13-206ENST00000397102 RNF149Q8NC42 400 aa16.7■□□□□ 0.26
SEC13-206ENST00000397102 ZBTB44Q8NCP5 570 aa16.7■□□□□ 0.26
SEC13-206ENST00000397102 TCP11Q8WWU5 503 aa16.7■□□□□ 0.26
SEC13-206ENST00000397102 ATRIPQ8WXE1 791 aa16.7■□□□□ 0.26
SEC13-206ENST00000397102 BRF1Q92994 677 aa16.7■□□□□ 0.26
SEC13-206ENST00000397102 SECISBP2LQ93073 1101 aaKnown RBP16.7■□□□□ 0.26
SEC13-206ENST00000397102 ZFP42Q96MM3 310 aa16.7■□□□□ 0.26
SEC13-206ENST00000397102 SLC26A6Q9BXS9 759 aa16.7■□□□□ 0.26
SEC13-206ENST00000397102 FBXW11Q9UKB1 542 aa16.7■□□□□ 0.26
SEC13-206ENST00000397102 ADAM28Q9UKQ2 775 aa16.7■□□□□ 0.26
SEC13-206ENST00000397102 GIT1Q9Y2X7 761 aa16.7■□□□□ 0.26
SEC13-206ENST00000397102 HES2Q9Y543 173 aa16.7■□□□□ 0.26
SEC13-206ENST00000397102 EML1O00423 815 aa16.69■□□□□ 0.26
SEC13-206ENST00000397102 TSPAN1O60635 241 aa16.69■□□□□ 0.26
SEC13-206ENST00000397102 HNRNPA1P09651 372 aaKnown RBP eCLIP16.69■□□□□ 0.26
SEC13-206ENST00000397102 IFNAR1P17181 557 aa16.69■□□□□ 0.26
SEC13-206ENST00000397102 RPL17P18621 184 aaKnown RBP16.69■□□□□ 0.26
SEC13-206ENST00000397102 PFKPQ01813 784 aa16.69■□□□□ 0.26
SEC13-206ENST00000397102 LMNB2Q03252 620 aa16.69■□□□□ 0.26
SEC13-206ENST00000397102 CSTF1Q05048 431 aaKnown RBP16.69■□□□□ 0.26
SEC13-206ENST00000397102 SLC44A4Q53GD3 710 aa16.69■□□□□ 0.26
SEC13-206ENST00000397102 GRASPQ7Z6J2 395 aaPredicted RBP16.69■□□□□ 0.26
SEC13-206ENST00000397102 FERMT3Q86UX7 667 aa16.69■□□□□ 0.26
SEC13-206ENST00000397102 CSRNP2Q9H175 543 aa16.69■□□□□ 0.26
SEC13-206ENST00000397102 EPC1Q9H2F5 836 aa16.69■□□□□ 0.26
SEC13-206ENST00000397102 LTB4R2Q9NPC1 389 aa16.69■□□□□ 0.26
SEC13-206ENST00000397102 ZSCAN32Q9NX65 697 aa16.69■□□□□ 0.26
SEC13-206ENST00000397102 PCDHA4Q9UN74 947 aa16.69■□□□□ 0.26
SEC13-206ENST00000397102 SMG5Q9UPR3 1016 aaKnown RBP16.69■□□□□ 0.26
SEC13-206ENST00000397102 MTF2Q9Y483 593 aaPredicted RBP16.69■□□□□ 0.26
SEC13-206ENST00000397102 FRYLO94915 3013 aa16.69■□□□□ 0.26
SEC13-206ENST00000397102 FAM170BA6NMN3 283 aa16.68■□□□□ 0.26
SEC13-206ENST00000397102 LILRB5O75023 590 aa16.68■□□□□ 0.26
SEC13-206ENST00000397102 P4HBP07237 508 aaKnown RBP16.68■□□□□ 0.26
SEC13-206ENST00000397102 CPA1P15085 419 aa16.68■□□□□ 0.26
SEC13-206ENST00000397102 PPP2R5CQ13362 524 aa16.68■□□□□ 0.26
SEC13-206ENST00000397102 EMC2Q15006 297 aa16.68■□□□□ 0.26
SEC13-206ENST00000397102 HACE1Q8IYU2 909 aa16.68■□□□□ 0.26
SEC13-206ENST00000397102 NELL1Q92832 810 aa16.68■□□□□ 0.26
SEC13-206ENST00000397102 FGF13Q92913 245 aa16.68■□□□□ 0.26
SEC13-206ENST00000397102 APOL6Q9BWW8 343 aa16.68■□□□□ 0.26
SEC13-206ENST00000397102 BMP2KQ9NSY1 1161 aaPredicted RBP16.68■□□□□ 0.26
SEC13-206ENST00000397102 WRAP73Q9P2S5 460 aaPredicted RBP16.68■□□□□ 0.26
SEC13-206ENST00000397102 DDX25Q9UHL0 483 aaKnown RBP16.68■□□□□ 0.26
SEC13-206ENST00000397102 CDV3Q9UKY7 258 aaKnown RBP16.68■□□□□ 0.26
SEC13-206ENST00000397102 ZMYM2Q9UBW7 1377 aa16.67■□□□□ 0.26
SEC13-206ENST00000397102 ACACBO00763 2458 aa16.67■□□□□ 0.26
SEC13-206ENST00000397102 HOXA9P31269 272 aa16.67■□□□□ 0.26
SEC13-206ENST00000397102 PTENP60484 403 aa16.67■□□□□ 0.26
SEC13-206ENST00000397102 NTHL1P78549 312 aa16.67■□□□□ 0.26
SEC13-206ENST00000397102 NCBP1Q09161 790 aaKnown RBP16.67■□□□□ 0.26
SEC13-206ENST00000397102 GRIK3Q13003 919 aa16.67■□□□□ 0.26
SEC13-206ENST00000397102 RTP2Q5QGT7 225 aa16.67■□□□□ 0.26
SEC13-206ENST00000397102 PPM1LQ5SGD2 360 aa16.67■□□□□ 0.26
SEC13-206ENST00000397102 ZBTB41Q5SVQ8 909 aa16.67■□□□□ 0.26
SEC13-206ENST00000397102 LIN9Q5TKA1 542 aa16.67■□□□□ 0.26
SEC13-206ENST00000397102 PRSS55Q6UWB4 352 aaPredicted RBP16.67■□□□□ 0.26
SEC13-206ENST00000397102 C4orf19Q8IY42 314 aa16.67■□□□□ 0.26
SEC13-206ENST00000397102 FBXL16Q8N461 479 aa16.67■□□□□ 0.26
SEC13-206ENST00000397102 GSTCDQ8NEC7 633 aa16.67■□□□□ 0.26
SEC13-206ENST00000397102 CPB2Q96IY4 423 aa16.67■□□□□ 0.26
SEC13-206ENST00000397102 RTKNQ9BST9 563 aa16.67■□□□□ 0.26
SEC13-206ENST00000397102 TRIM6Q9C030 488 aaPredicted RBP16.67■□□□□ 0.26
SEC13-206ENST00000397102 NXF3Q9H4D5 531 aaKnown RBP16.67■□□□□ 0.26
SEC13-206ENST00000397102 VAV3Q9UKW4 847 aa16.67■□□□□ 0.26
SEC13-206ENST00000397102 SF3B1O75533 1304 aaKnown RBP eCLIP16.67■□□□□ 0.264e-7■■■■■ 86.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms