RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 CTNNAL1Q9UBT7 734 aa15.78■□□□□ 0.12
CCNF-202ENST00000397066 SLC12A4Q9UP95 1085 aa15.78■□□□□ 0.12
CCNF-202ENST00000397066 BMP3P12645 472 aa15.78■□□□□ 0.12
CCNF-202ENST00000397066 TRIM68Q6AZZ1 485 aa15.78■□□□□ 0.12
CCNF-202ENST00000397066 NGLY1Q96IV0 654 aa15.78■□□□□ 0.12
CCNF-202ENST00000397066 PEX19P40855 299 aa15.77■□□□□ 0.12
CCNF-202ENST00000397066 TNIP1Q15025 636 aa15.77■□□□□ 0.12
CCNF-202ENST00000397066 CYP4F22Q6NT55 531 aa15.77■□□□□ 0.12
CCNF-202ENST00000397066 ARHGEF18Q6ZSZ5 1173 aa15.77■□□□□ 0.12
CCNF-202ENST00000397066 TEX2Q8IWB9 1127 aa15.77■□□□□ 0.12
CCNF-202ENST00000397066 LARSQ9P2J5 1176 aaKnown RBP15.77■□□□□ 0.12
CCNF-202ENST00000397066 HIP1RO75146 1068 aa15.77■□□□□ 0.12
CCNF-202ENST00000397066 DLG4P78352 724 aa15.77■□□□□ 0.12
CCNF-202ENST00000397066 ABCB5Q2M3G0 1257 aa15.77■□□□□ 0.12
CCNF-202ENST00000397066 CYFIP1Q7L576 1253 aa15.77■□□□□ 0.12
CCNF-202ENST00000397066 ATG4AQ8WYN0 398 aa15.77■□□□□ 0.12
CCNF-202ENST00000397066 RPS6KC1Q96S38 1066 aa15.77■□□□□ 0.12
CCNF-202ENST00000397066 PITPNM3Q9BZ71 974 aa15.77■□□□□ 0.12
CCNF-202ENST00000397066 ADAM7Q9H2U9 754 aa15.77■□□□□ 0.12
CCNF-202ENST00000397066 EHMT1Q9H9B1 1298 aa15.77■□□□□ 0.12
CCNF-202ENST00000397066 ETNK1Q9HBU6 452 aa15.77■□□□□ 0.12
CCNF-202ENST00000397066 SEL1LQ9UBV2 794 aa15.77■□□□□ 0.12
CCNF-202ENST00000397066 NENFQ9UMX5 172 aa15.77■□□□□ 0.12
CCNF-202ENST00000397066 SLITRK3O94933 977 aa15.77■□□□□ 0.11
CCNF-202ENST00000397066 MAPK4P31152 587 aa15.77■□□□□ 0.11
CCNF-202ENST00000397066 PRELPP51888 382 aa15.77■□□□□ 0.11
CCNF-202ENST00000397066 ZNF131P52739 623 aa15.77■□□□□ 0.11
CCNF-202ENST00000397066 TMED2Q15363 201 aa15.77■□□□□ 0.11
CCNF-202ENST00000397066 SEPT7Q16181 437 aaKnown RBP15.77■□□□□ 0.11
CCNF-202ENST00000397066 C15orf52Q6ZUT6 534 aaKnown RBP15.77■□□□□ 0.11
CCNF-202ENST00000397066 ZFPM1Q8IX07 1006 aa15.77■□□□□ 0.11
CCNF-202ENST00000397066 HEMGNQ9BXL5 484 aa15.77■□□□□ 0.11
CCNF-202ENST00000397066 TUFT1Q9NNX1 390 aa15.77■□□□□ 0.11
CCNF-202ENST00000397066 AFF2P51816 1311 aa15.77■□□□□ 0.11
CCNF-202ENST00000397066 PLIN4Q96Q06 1357 aa15.77■□□□□ 0.11
CCNF-202ENST00000397066 CREB1P16220 341 aa15.77■□□□□ 0.11
CCNF-202ENST00000397066 RFX1P22670 979 aa15.77■□□□□ 0.11
CCNF-202ENST00000397066 CDC25CP30307 473 aa15.77■□□□□ 0.11
CCNF-202ENST00000397066 KIF22Q14807 665 aa15.77■□□□□ 0.11
CCNF-202ENST00000397066 MIGA2Q7L4E1 593 aa15.77■□□□□ 0.11
CCNF-202ENST00000397066 AMIGO3Q86WK7 504 aa15.77■□□□□ 0.11
CCNF-202ENST00000397066 KIFAP3Q92845 792 aa15.77■□□□□ 0.11
CCNF-202ENST00000397066 PNMA3Q9UL41 463 aa15.77■□□□□ 0.11
CCNF-202ENST00000397066 C15orf41Q9Y2V0 281 aa15.77■□□□□ 0.11
CCNF-202ENST00000397066 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.77■□□□□ 0.11
CCNF-202ENST00000397066 BHMG1C9JSJ3 638 aaPredicted RBP15.76■□□□□ 0.11
CCNF-202ENST00000397066 NCALDP61601 193 aa15.76■□□□□ 0.11
CCNF-202ENST00000397066 CAPN12Q6ZSI9 719 aa15.76■□□□□ 0.11
CCNF-202ENST00000397066 SEPT14Q6ZU15 432 aa15.76■□□□□ 0.11
CCNF-202ENST00000397066 C1orf186Q6ZWK4 172 aa15.76■□□□□ 0.11
CCNF-202ENST00000397066 KAT5Q92993 513 aa15.76■□□□□ 0.11
CCNF-202ENST00000397066 NAV1Q8NEY1 1877 aa15.76■□□□□ 0.11
CCNF-202ENST00000397066 TISP43B9A030 160 aa15.76■□□□□ 0.11
CCNF-202ENST00000397066 POLD1P28340 1107 aa15.76■□□□□ 0.11
CCNF-202ENST00000397066 MFAP3P55082 362 aa15.76■□□□□ 0.11
CCNF-202ENST00000397066 EP400NLQ6ZTU2 488 aa15.76■□□□□ 0.11
CCNF-202ENST00000397066 ART4Q93070 314 aa15.76■□□□□ 0.11
CCNF-202ENST00000397066 SPDL1Q96EA4 605 aa15.76■□□□□ 0.11
CCNF-202ENST00000397066 ANAPC7Q9UJX3 599 aa15.76■□□□□ 0.11
CCNF-202ENST00000397066 VAV3Q9UKW4 847 aa15.76■□□□□ 0.11
CCNF-202ENST00000397066 ATP8B3O60423 1300 aa15.76■□□□□ 0.11
CCNF-202ENST00000397066 NDUFB10O96000 172 aa15.76■□□□□ 0.11
CCNF-202ENST00000397066 POLR2MP0CAP2 368 aa15.76■□□□□ 0.11
CCNF-202ENST00000397066 CPNE8Q86YQ8 564 aa15.76■□□□□ 0.11
CCNF-202ENST00000397066 SNF8Q96H20 258 aa15.76■□□□□ 0.11
CCNF-202ENST00000397066 SERPINB12Q96P63 405 aa15.76■□□□□ 0.11
CCNF-202ENST00000397066 FAM118BQ9BPY3 351 aa15.76■□□□□ 0.11
CCNF-202ENST00000397066 SH2D3AQ9BRG2 576 aa15.76■□□□□ 0.11
CCNF-202ENST00000397066 FAM167BQ9BTA0 163 aa15.76■□□□□ 0.11
CCNF-202ENST00000397066 DNAJC18Q9H819 358 aa15.76■□□□□ 0.11
CCNF-202ENST00000397066 TRIM33Q9UPN9 1127 aa15.76■□□□□ 0.11
CCNF-202ENST00000397066 CTNNA2P26232 953 aa15.75■□□□□ 0.11
CCNF-202ENST00000397066 IL9RQ01113 521 aa15.75■□□□□ 0.11
CCNF-202ENST00000397066 GRK7Q8WTQ7 553 aa15.75■□□□□ 0.11
CCNF-202ENST00000397066 LENG9Q96B70 501 aa15.75■□□□□ 0.11
CCNF-202ENST00000397066 C8orf37Q96NL8 207 aa15.75■□□□□ 0.11
CCNF-202ENST00000397066 P2RX7Q99572 595 aaKnown RBP15.75■□□□□ 0.11
CCNF-202ENST00000397066 LXNQ9BS40 222 aa15.75■□□□□ 0.11
CCNF-202ENST00000397066 COA1Q9GZY4 146 aa15.75■□□□□ 0.11
CCNF-202ENST00000397066 PI4KBQ9UBF8 816 aa15.75■□□□□ 0.11
CCNF-202ENST00000397066 USTQ9Y2C2 406 aa15.75■□□□□ 0.11
CCNF-202ENST00000397066 KRT15P19012 456 aa15.75■□□□□ 0.11
CCNF-202ENST00000397066 CCND1P24385 295 aa15.75■□□□□ 0.11
CCNF-202ENST00000397066 MSH2P43246 934 aa15.75■□□□□ 0.11
CCNF-202ENST00000397066 ITGA8P53708 1063 aa15.75■□□□□ 0.11
CCNF-202ENST00000397066 STRN3Q13033 797 aa15.75■□□□□ 0.11
CCNF-202ENST00000397066 CRELD2Q6UXH1 353 aaPredicted RBP15.75■□□□□ 0.11
CCNF-202ENST00000397066 MORC4Q8TE76 937 aa15.75■□□□□ 0.11
CCNF-202ENST00000397066 RAB3IPQ96QF0 476 aaPredicted RBP15.75■□□□□ 0.11
CCNF-202ENST00000397066 TEKT3Q9BXF9 490 aa15.75■□□□□ 0.11
CCNF-202ENST00000397066 NYAP2Q9P242 653 aa15.75■□□□□ 0.11
CCNF-202ENST00000397066 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.75■□□□□ 0.11
CCNF-202ENST00000397066 A8MUI8 341 aa15.75■□□□□ 0.11
CCNF-202ENST00000397066 RGL2O15211 777 aa15.75■□□□□ 0.11
CCNF-202ENST00000397066 TOM1O60784 492 aa15.75■□□□□ 0.11
CCNF-202ENST00000397066 RBM26Q5T8P6 1007 aaKnown RBP15.75■□□□□ 0.11
CCNF-202ENST00000397066 PADI6Q6TGC4 694 aa15.75■□□□□ 0.11
CCNF-202ENST00000397066 BORCS6Q96GS4 357 aa15.75■□□□□ 0.11
CCNF-202ENST00000397066 MBOAT7Q96N66 472 aa15.75■□□□□ 0.11
CCNF-202ENST00000397066 RASA4BC9J798 803 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms