RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 CREMQ03060 361 aa9.44□□□□□ -0.9
SCFD1-202ENST00000396629 USP41Q3LFD5 358 aa9.44□□□□□ -0.9
SCFD1-202ENST00000396629 ANO5Q75V66 913 aa9.44□□□□□ -0.9
SCFD1-202ENST00000396629 GRASPQ7Z6J2 395 aaPredicted RBP9.44□□□□□ -0.9
SCFD1-202ENST00000396629 GJA10Q969M2 543 aa9.44□□□□□ -0.9
SCFD1-202ENST00000396629 NELL2Q99435 816 aa9.44□□□□□ -0.9
SCFD1-202ENST00000396629 GPR62Q9BZJ7 368 aa9.44□□□□□ -0.9
SCFD1-202ENST00000396629 PRMT8Q9NR22 394 aaPredicted RBP9.44□□□□□ -0.9
SCFD1-202ENST00000396629 USP18Q9UMW8 372 aa9.44□□□□□ -0.9
SCFD1-202ENST00000396629 SPTBN2O15020 2390 aa9.44□□□□□ -0.9
SCFD1-202ENST00000396629 ARID2Q68CP9 1835 aa9.44□□□□□ -0.9
SCFD1-202ENST00000396629 ARL5CA6NH57 179 aa9.44□□□□□ -0.9
SCFD1-202ENST00000396629 PRPF3O43395 683 aaKnown RBP9.44□□□□□ -0.9
SCFD1-202ENST00000396629 HNRNPA1P09651 372 aaKnown RBP eCLIP9.44□□□□□ -0.9
SCFD1-202ENST00000396629 ADD1P35611 737 aaKnown RBP9.44□□□□□ -0.9
SCFD1-202ENST00000396629 FZD5Q13467 585 aa9.44□□□□□ -0.9
SCFD1-202ENST00000396629 Q4G0T1 1027 aa9.44□□□□□ -0.9
SCFD1-202ENST00000396629 ZBTB41Q5SVQ8 909 aa9.44□□□□□ -0.9
SCFD1-202ENST00000396629 FUT10Q6P4F1 479 aa9.44□□□□□ -0.9
SCFD1-202ENST00000396629 DHX32Q7L7V1 743 aaKnown RBP9.44□□□□□ -0.9
SCFD1-202ENST00000396629 BICD2Q8TD16 824 aa9.44□□□□□ -0.9
SCFD1-202ENST00000396629 B3GALT6Q96L58 329 aa9.44□□□□□ -0.9
SCFD1-202ENST00000396629 GAD1Q99259 594 aa9.44□□□□□ -0.9
SCFD1-202ENST00000396629 FAM126AQ9BYI3 521 aaPredicted RBP9.44□□□□□ -0.9
SCFD1-202ENST00000396629 FBXW11Q9UKB1 542 aa9.44□□□□□ -0.9
SCFD1-202ENST00000396629 IPPQ9Y573 584 aa9.44□□□□□ -0.9
SCFD1-202ENST00000396629 RALGAPA1Q6GYQ0 2036 aa9.44□□□□□ -0.9
SCFD1-202ENST00000396629 KLF18A0A0U1RQI7 1052 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 SLC30A4O14863 429 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 NCAM2O15394 837 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 NR1I2O75469 434 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 TDGF1P13385 188 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 TARSP26639 723 aaKnown RBP9.43□□□□□ -0.9
SCFD1-202ENST00000396629 SCNN1GP51170 649 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 NTHL1P78549 312 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 GLYCTKQ8IVS8 523 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 PRPF31Q8WWY3 499 aaKnown RBP9.43□□□□□ -0.9
SCFD1-202ENST00000396629 FGF13Q92913 245 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 TCEANC2Q96MN5 208 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 ESYT1Q9BSJ8 1104 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 EIF2AQ9BY44 585 aaKnown RBP9.43□□□□□ -0.9
SCFD1-202ENST00000396629 GMEB2Q9UKD1 530 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 PPME1Q9Y570 386 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 CYP3A7-CYP3A51PA0A087WV96 503 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 POU2F2P09086 479 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 SRGAP2CP0DJJ0 459 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 RPL17P18621 184 aaKnown RBP9.43□□□□□ -0.9
SCFD1-202ENST00000396629 CD72P21854 359 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 CYP3A7P24462 503 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 AXLP30530 894 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 HOXA9P31269 272 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 MLH1P40692 756 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 PSMC5P62195 406 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 LAMTOR4Q0VGL1 99 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 PLA2G4FQ68DD2 849 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 TSSK4Q6SA08 328 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 MAMSTRQ6ZN01 415 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 EXOC8Q8IYI6 725 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 ITFG1Q8TB96 612 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 NETO1Q8TDF5 533 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 CCDC51Q96ER9 411 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 PHF20Q9BVI0 1012 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 DHX33Q9H6R0 707 aaKnown RBP9.43□□□□□ -0.9
SCFD1-202ENST00000396629 ADAM28Q9UKQ2 775 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 GIT1Q9Y2X7 761 aa9.43□□□□□ -0.9
SCFD1-202ENST00000396629 VWA8A3KMH1 1905 aa9.42□□□□□ -0.9
SCFD1-202ENST00000396629 CCDC196A0A1B0GTZ2 297 aa9.42□□□□□ -0.9
SCFD1-202ENST00000396629 SHISA7A6NL88 538 aa9.42□□□□□ -0.9
SCFD1-202ENST00000396629 ASAP2O43150 1006 aa9.42□□□□□ -0.9
SCFD1-202ENST00000396629 LRP3O75074 770 aa9.42□□□□□ -0.9
SCFD1-202ENST00000396629 COL4A2P08572 1712 aa9.42□□□□□ -0.9
SCFD1-202ENST00000396629 NPEPPSP55786 919 aa9.42□□□□□ -0.9
SCFD1-202ENST00000396629 PCBP1Q15365 356 aaKnown RBP eCLIP9.42□□□□□ -0.9
SCFD1-202ENST00000396629 PPM1JQ5JR12 505 aa9.42□□□□□ -0.9
SCFD1-202ENST00000396629 LAIR1Q6GTX8 287 aa9.42□□□□□ -0.9
SCFD1-202ENST00000396629 TPRG1Q6ZUI0 275 aa9.42□□□□□ -0.9
SCFD1-202ENST00000396629 ZNF579Q8NAF0 562 aaKnown RBP9.42□□□□□ -0.9
SCFD1-202ENST00000396629 GSTCDQ8NEC7 633 aa9.42□□□□□ -0.9
SCFD1-202ENST00000396629 PSPC1Q8WXF1 523 aaKnown RBP9.42□□□□□ -0.9
SCFD1-202ENST00000396629 CHAMP1Q96JM3 812 aa9.42□□□□□ -0.9
SCFD1-202ENST00000396629 ZFP42Q96MM3 310 aa9.42□□□□□ -0.9
SCFD1-202ENST00000396629 CLSTN3Q9BQT9 956 aa9.42□□□□□ -0.9
SCFD1-202ENST00000396629 CSRNP2Q9H175 543 aa9.42□□□□□ -0.9
SCFD1-202ENST00000396629 NID2Q14112 1375 aa9.42□□□□□ -0.9
SCFD1-202ENST00000396629 ZMYM2Q9UBW7 1377 aa9.42□□□□□ -0.9
SCFD1-202ENST00000396629 USP24Q9UPU5 2620 aa9.42□□□□□ -0.9
SCFD1-202ENST00000396629 ZFHX4Q86UP3 3567 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 TSPAN1O60635 241 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 RFC5P40937 340 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 SPEM2Q0P670 501 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 TSGA10IPQ3SY00 556 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 RTP2Q5QGT7 225 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 PPM1LQ5SGD2 360 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 RNF20Q5VTR2 975 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 PRSS55Q6UWB4 352 aaPredicted RBP9.41□□□□□ -0.9
SCFD1-202ENST00000396629 ZNF687Q8N1G0 1237 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 CELF5Q8N6W0 485 aaKnown RBP9.41□□□□□ -0.9
SCFD1-202ENST00000396629 CCDC148Q8NFR7 591 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 ETNPPLQ8TBG4 499 aa9.41□□□□□ -0.9
SCFD1-202ENST00000396629 SLC7A3Q8WY07 619 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms