RNA–Protein interactions for RNA: ENST00000396123.2

GREB1-206, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 1 (best) BASIC

Gene GREB1, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-206ENST00000396123 KIAA1841Q6NSI8 718 aa13.88□□□□□ -0.19
GREB1-206ENST00000396123 KLC3Q6P597 504 aa13.88□□□□□ -0.19
GREB1-206ENST00000396123 PDZD8Q8NEN9 1154 aa13.88□□□□□ -0.19
GREB1-206ENST00000396123 LPAR1Q92633 364 aa13.88□□□□□ -0.19
GREB1-206ENST00000396123 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.88□□□□□ -0.191e-8■■■■■ 34
GREB1-206ENST00000396123 SPDL1Q96EA4 605 aa13.88□□□□□ -0.19
GREB1-206ENST00000396123 TTC1Q99614 292 aa13.88□□□□□ -0.19
GREB1-206ENST00000396123 RBM12Q9NTZ6 932 aaKnown RBP13.88□□□□□ -0.19
GREB1-206ENST00000396123 PRKAG2Q9UGJ0 569 aa13.88□□□□□ -0.19
GREB1-206ENST00000396123 ABT1Q9ULW3 272 aaKnown RBP13.88□□□□□ -0.19
GREB1-206ENST00000396123 UBE2Q2LH0YL09 131 aa13.88□□□□□ -0.19
GREB1-206ENST00000396123 WDR46O15213 610 aaKnown RBP13.88□□□□□ -0.19
GREB1-206ENST00000396123 KLK7P49862 253 aa13.88□□□□□ -0.19
GREB1-206ENST00000396123 ARPP19P56211 112 aa13.88□□□□□ -0.19
GREB1-206ENST00000396123 LMBRD2Q68DH5 695 aaPredicted RBP13.88□□□□□ -0.19
GREB1-206ENST00000396123 LRRC37BQ96QE4 947 aa13.88□□□□□ -0.19
GREB1-206ENST00000396123 SH2D3AQ9BRG2 576 aa13.88□□□□□ -0.19
GREB1-206ENST00000396123 TRAIPQ9BWF2 469 aa13.88□□□□□ -0.19
GREB1-206ENST00000396123 FAM217BQ9NTX9 383 aaPredicted RBP13.88□□□□□ -0.19
GREB1-206ENST00000396123 ZFP69BQ9UJL9 534 aa13.88□□□□□ -0.19
GREB1-206ENST00000396123 TPX2Q9ULW0 747 aaKnown RBP13.88□□□□□ -0.19
GREB1-206ENST00000396123 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.88□□□□□ -0.19
GREB1-206ENST00000396123 SPECC1L-ADORA2AF8WAN1 911 aa13.87□□□□□ -0.19
GREB1-206ENST00000396123 CFLARO15519 480 aa13.87□□□□□ -0.19
GREB1-206ENST00000396123 SLC4A1P02730 911 aa13.87□□□□□ -0.19
GREB1-206ENST00000396123 LRRC14Q15048 493 aa13.87□□□□□ -0.19
GREB1-206ENST00000396123 HP1BP3Q5SSJ5 553 aaPredicted RBP13.87□□□□□ -0.19
GREB1-206ENST00000396123 FAM102AQ5T9C2 384 aaPredicted RBP13.87□□□□□ -0.19
GREB1-206ENST00000396123 ZNF526Q8TF50 670 aaPredicted RBP13.87□□□□□ -0.19
GREB1-206ENST00000396123 INTUQ9ULD6 942 aa13.87□□□□□ -0.19
GREB1-206ENST00000396123 FOXP2O15409 715 aa13.87□□□□□ -0.19
GREB1-206ENST00000396123 LMNAP02545 664 aaKnown RBP13.87□□□□□ -0.19
GREB1-206ENST00000396123 VPS72Q15906 364 aa13.87□□□□□ -0.19
GREB1-206ENST00000396123 XKR3Q5GH77 459 aa13.87□□□□□ -0.19
GREB1-206ENST00000396123 SYN2Q92777 582 aaPredicted RBP13.87□□□□□ -0.19
GREB1-206ENST00000396123 MKNK1Q9BUB5 465 aa13.87□□□□□ -0.19
GREB1-206ENST00000396123 DONSONQ9NYP3 566 aa13.87□□□□□ -0.19
GREB1-206ENST00000396123 APOBEC2Q9Y235 224 aaKnown RBP13.87□□□□□ -0.19
GREB1-206ENST00000396123 ZNF668Q96K58 619 aaPredicted RBP13.87□□□□□ -0.19
GREB1-206ENST00000396123 TRIM4Q9C037 500 aa13.87□□□□□ -0.19
GREB1-206ENST00000396123 FAM96AQ9H5X1 160 aa13.87□□□□□ -0.19
GREB1-206ENST00000396123 STAP1Q9ULZ2 295 aa13.87□□□□□ -0.19
GREB1-206ENST00000396123 KDM6AO15550 1401 aaPredicted RBP13.87□□□□□ -0.19
GREB1-206ENST00000396123 DIP2BQ9P265 1576 aa13.87□□□□□ -0.19
GREB1-206ENST00000396123 COL3A1P02461 1466 aaPredicted RBP13.87□□□□□ -0.19
GREB1-206ENST00000396123 EIF3DO15371 548 aaKnown RBP eCLIP13.87□□□□□ -0.192e-7■■□□□ 12.6
GREB1-206ENST00000396123 FGFR4P22455 802 aa13.87□□□□□ -0.19
GREB1-206ENST00000396123 ROR1Q01973 937 aa13.87□□□□□ -0.19
GREB1-206ENST00000396123 STAT4Q14765 748 aa13.87□□□□□ -0.19
GREB1-206ENST00000396123 SYDE1Q6ZW31 735 aaPredicted RBP13.87□□□□□ -0.19
GREB1-206ENST00000396123 NOA1Q8NC60 698 aaKnown RBP13.87□□□□□ -0.19
GREB1-206ENST00000396123 SPATA33Q96N06 139 aa13.87□□□□□ -0.19
GREB1-206ENST00000396123 L2HGDHQ9H9P8 463 aa13.87□□□□□ -0.19
GREB1-206ENST00000396123 THEGQ9P2T0 379 aa13.87□□□□□ -0.19
GREB1-206ENST00000396123 PHF2O75151 1096 aa13.86□□□□□ -0.19
GREB1-206ENST00000396123 MDH1P40925 334 aaKnown RBP13.86□□□□□ -0.19
GREB1-206ENST00000396123 HEATR6Q6AI08 1181 aaKnown RBP13.86□□□□□ -0.19
GREB1-206ENST00000396123 LRIG3Q6UXM1 1119 aa13.86□□□□□ -0.19
GREB1-206ENST00000396123 DDX27Q96GQ7 796 aaKnown RBP13.86□□□□□ -0.19
GREB1-206ENST00000396123 AGXT2Q9BYV1 514 aa13.86□□□□□ -0.19
GREB1-206ENST00000396123 HPCAL4Q9UM19 191 aa13.86□□□□□ -0.19
GREB1-206ENST00000396123 CNTNAP4Q9C0A0 1308 aa13.86□□□□□ -0.19
GREB1-206ENST00000396123 GNAT1P11488 350 aa13.86□□□□□ -0.19
GREB1-206ENST00000396123 PAMP19021 973 aa13.86□□□□□ -0.19
GREB1-206ENST00000396123 PMLP29590 882 aa13.86□□□□□ -0.19
GREB1-206ENST00000396123 CIITAP33076 1130 aa13.86□□□□□ -0.19
GREB1-206ENST00000396123 CYP2C19P33261 490 aa13.86□□□□□ -0.19
GREB1-206ENST00000396123 CASP2P42575 452 aa13.86□□□□□ -0.19
GREB1-206ENST00000396123 TOB1P50616 345 aaPredicted RBP13.86□□□□□ -0.19
GREB1-206ENST00000396123 ARSEP51690 589 aa13.86□□□□□ -0.19
GREB1-206ENST00000396123 STAT5BP51692 787 aa13.86□□□□□ -0.19
GREB1-206ENST00000396123 HMGCS2P54868 508 aa13.86□□□□□ -0.19
GREB1-206ENST00000396123 SNRNP35Q16560 246 aaKnown RBP13.86□□□□□ -0.19
GREB1-206ENST00000396123 VCPKMTQ9H867 229 aa13.86□□□□□ -0.19
GREB1-206ENST00000396123 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.86□□□□□ -0.19
GREB1-206ENST00000396123 HAUS5O94927 633 aa13.86□□□□□ -0.19
GREB1-206ENST00000396123 MX2P20592 715 aa13.86□□□□□ -0.19
GREB1-206ENST00000396123 CHRNA5P30532 468 aa13.86□□□□□ -0.19
GREB1-206ENST00000396123 MDM2Q00987 491 aaPredicted RBP13.86□□□□□ -0.19
GREB1-206ENST00000396123 ZC2HC1CQ53FD0 456 aaPredicted RBP13.86□□□□□ -0.19
GREB1-206ENST00000396123 TWF2Q6IBS0 349 aaKnown RBP13.86□□□□□ -0.19
GREB1-206ENST00000396123 SLC30A5Q8TAD4 765 aa13.86□□□□□ -0.19
GREB1-206ENST00000396123 TRIM51Q9BSJ1 452 aa13.86□□□□□ -0.19
GREB1-206ENST00000396123 PLAGL2Q9UPG8 496 aa13.86□□□□□ -0.19
GREB1-206ENST00000396123 AGTP01019 485 aa13.86□□□□□ -0.19
GREB1-206ENST00000396123 XPAP23025 273 aaPredicted RBP13.86□□□□□ -0.19
GREB1-206ENST00000396123 BAATQ14032 418 aaPredicted RBP13.86□□□□□ -0.19
GREB1-206ENST00000396123 SH2D3CQ8N5H7 860 aa13.86□□□□□ -0.19
GREB1-206ENST00000396123 ANKS1AQ92625 1134 aa13.86□□□□□ -0.19
GREB1-206ENST00000396123 GRAMD1AQ96CP6 724 aa13.86□□□□□ -0.19
GREB1-206ENST00000396123 FNDC3AQ9Y2H6 1198 aaKnown RBP13.86□□□□□ -0.19
GREB1-206ENST00000396123 CD44P16070 742 aaKnown RBP13.85□□□□□ -0.19
GREB1-206ENST00000396123 CDH6P55285 790 aa13.85□□□□□ -0.19
GREB1-206ENST00000396123 MTMR2Q13614 643 aa13.85□□□□□ -0.19
GREB1-206ENST00000396123 COG2Q14746 738 aa13.85□□□□□ -0.19
GREB1-206ENST00000396123 TRIM67Q6ZTA4 783 aa13.85□□□□□ -0.19
GREB1-206ENST00000396123 RYBPQ8N488 228 aaPredicted RBP13.85□□□□□ -0.19
GREB1-206ENST00000396123 MMGT1Q8N4V1 131 aa13.85□□□□□ -0.19
GREB1-206ENST00000396123 RNF149Q8NC42 400 aa13.85□□□□□ -0.19
GREB1-206ENST00000396123 N4BP2L2Q92802 583 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms