RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 SASH3O75995 380 aa13.12□□□□□ -0.31
ITGB1-202ENST00000396033 GTF2H1P32780 548 aa13.12□□□□□ -0.31
ITGB1-202ENST00000396033 MATR3P43243 847 aaKnown RBP eCLIP13.12□□□□□ -0.317e-7■■■■□ 20.7
ITGB1-202ENST00000396033 FBXL13Q8NEE6 735 aa13.12□□□□□ -0.31
ITGB1-202ENST00000396033 KIAA1586Q9HCI6 787 aa13.12□□□□□ -0.31
ITGB1-202ENST00000396033 MCM3APO60318 1980 aa13.12□□□□□ -0.31
ITGB1-202ENST00000396033 MAFO75444 373 aaPredicted RBP13.12□□□□□ -0.31
ITGB1-202ENST00000396033 GALCP54803 685 aa13.12□□□□□ -0.31
ITGB1-202ENST00000396033 CAPSQ13938 189 aa13.12□□□□□ -0.31
ITGB1-202ENST00000396033 MEI1Q5TIA1 1274 aa13.12□□□□□ -0.31
ITGB1-202ENST00000396033 GPRC5AQ8NFJ5 357 aa13.12□□□□□ -0.31
ITGB1-202ENST00000396033 TAS1R2Q8TE23 839 aa13.12□□□□□ -0.31
ITGB1-202ENST00000396033 COPS5Q92905 334 aa13.12□□□□□ -0.31
ITGB1-202ENST00000396033 AGPAT1Q99943 283 aa13.12□□□□□ -0.31
ITGB1-202ENST00000396033 ANKFY1Q9P2R3 1169 aa13.12□□□□□ -0.31
ITGB1-202ENST00000396033 AGO2Q9UKV8 859 aaKnown RBP13.12□□□□□ -0.31
ITGB1-202ENST00000396033 PACSIN2Q9UNF0 486 aaPredicted RBP13.12□□□□□ -0.31
ITGB1-202ENST00000396033 PDHXO00330 501 aa13.12□□□□□ -0.31
ITGB1-202ENST00000396033 TXNP10599 105 aaKnown RBP13.12□□□□□ -0.31
ITGB1-202ENST00000396033 MFAP3P55082 362 aa13.12□□□□□ -0.31
ITGB1-202ENST00000396033 VSNL1P62760 191 aa13.12□□□□□ -0.31
ITGB1-202ENST00000396033 CCNA1P78396 465 aa13.12□□□□□ -0.31
ITGB1-202ENST00000396033 DRP2Q13474 957 aa13.12□□□□□ -0.31
ITGB1-202ENST00000396033 SLC20A1Q8WUM9 679 aa13.12□□□□□ -0.31
ITGB1-202ENST00000396033 NT5C1BQ96P26 610 aa13.12□□□□□ -0.31
ITGB1-202ENST00000396033 ZCCHC17Q9NP64 241 aaKnown RBP13.12□□□□□ -0.31
ITGB1-202ENST00000396033 RAB20Q9NX57 234 aa13.12□□□□□ -0.31
ITGB1-202ENST00000396033 SMARCAL1Q9NZC9 954 aa13.12□□□□□ -0.31
ITGB1-202ENST00000396033 COQ4Q9Y3A0 265 aa13.12□□□□□ -0.31
ITGB1-202ENST00000396033 ASB14A6NK59 587 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 LGR5O75473 907 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 ERLIN1O75477 346 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 CETPP11597 493 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 PAFAH1B1P43034 410 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 GPC3P51654 580 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 NLRP11P59045 1033 aaKnown RBP13.11□□□□□ -0.31
ITGB1-202ENST00000396033 SV2AQ7L0J3 742 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 MORC4Q8TE76 937 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 KCNN1Q92952 543 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 KREMEN1Q96MU8 473 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 TARS2Q9BW92 718 aaKnown RBP13.11□□□□□ -0.31
ITGB1-202ENST00000396033 EHD2Q9NZN4 543 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 PPME1Q9Y570 386 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 SIP14410 1827 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 A0A0A6YYK5 440 aaPredicted RBP13.11□□□□□ -0.31
ITGB1-202ENST00000396033 CCL15-CCL14A0A0B4J2E2 113 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 FAM170AA1A519 330 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 KIAA0391O15091 583 aaKnown RBP13.11□□□□□ -0.31
ITGB1-202ENST00000396033 PIGRP01833 764 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 ENPEPQ07075 957 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 TTLL4Q14679 1199 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 CCL15Q16663 113 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 CCDC62Q6P9F0 684 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 ATP8B4Q8TF62 1192 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 PSPC1Q8WXF1 523 aaKnown RBP13.11□□□□□ -0.31
ITGB1-202ENST00000396033 CTNNBL1Q8WYA6 563 aaPredicted RBP13.11□□□□□ -0.31
ITGB1-202ENST00000396033 FNBP1Q96RU3 617 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 SUGCTQ9HAC7 445 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 PDGFCQ9NRA1 345 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 STYXL1Q9Y6J8 313 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 GRIN3BO60391 1043 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 TUBBP07437 444 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 ABCB4P21439 1286 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 ACOT2P49753 483 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 SLFN12LQ6IEE8 588 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 ARMCX2Q7L311 632 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 ZNF572Q7Z3I7 529 aaPredicted RBP13.11□□□□□ -0.31
ITGB1-202ENST00000396033 TPCN2Q8NHX9 752 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 PRPF31Q8WWY3 499 aaKnown RBP13.11□□□□□ -0.31
ITGB1-202ENST00000396033 ZBTB45Q96K62 511 aaPredicted RBP13.11□□□□□ -0.31
ITGB1-202ENST00000396033 MSTO1Q9BUK6 570 aa13.11□□□□□ -0.31
ITGB1-202ENST00000396033 LOC102724159A0A0B4J2E5 919 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 ADCY3O60266 1144 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 GTF2A2P52657 109 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 PWP2Q15269 919 aaKnown RBP13.1□□□□□ -0.31
ITGB1-202ENST00000396033 LONRF2Q1L5Z9 754 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 TMEM63BQ5T3F8 832 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 LMBRD2Q68DH5 695 aaPredicted RBP13.1□□□□□ -0.31
ITGB1-202ENST00000396033 PLPPR4Q7Z2D5 763 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 PALB2Q86YC2 1186 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 TAF4BQ92750 862 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 FAM84AQ96KN4 292 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 GOLPH3Q9H4A6 298 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 TMEM134Q9H6X4 195 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 TAS2R14Q9NYV8 317 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 TRPC6Q9Y210 931 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 ZNFX1Q9P2E3 1918 aaKnown RBP13.1□□□□□ -0.31
ITGB1-202ENST00000396033 UNCXA6NJT0 531 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 BTBD19C9JJ37 291 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 TMEM253P0C7T8 217 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 PSMD6Q15008 389 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 PLCB4Q15147 1175 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 RPUSD2Q8IZ73 545 aaKnown RBP13.1□□□□□ -0.31
ITGB1-202ENST00000396033 LRRC57Q8N9N7 239 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 SPATA4Q8NEY3 305 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 HELQQ8TDG4 1101 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 SCFD2Q8WU76 684 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 HAPLN2Q9GZV7 340 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 NCANO14594 1321 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 EDN1P05305 212 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms