RNA–Protein interactions for RNA: ENST00000395740.5

FGD4-201, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 1 (best)

Gene FGD4, Length 2,691 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-201ENST00000395740 RGS17Q9UGC6 210 aaPredicted RBP5.44□□□□□ -1.54
FGD4-201ENST00000395740 LNPEPQ9UIQ6 1025 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 LTBP1Q14766 1721 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 E9PMD0 336 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 IGF2BP3O00425 579 aaKnown RBP eCLIP5.44□□□□□ -1.54
FGD4-201ENST00000395740 PRPF4O43172 522 aaKnown RBP eCLIP5.44□□□□□ -1.54
FGD4-201ENST00000395740 MARCH6O60337 910 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 HIP1RO75146 1068 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 CDH16O75309 829 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 TTC4O95801 387 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 KRT18P05783 430 aaKnown RBP5.44□□□□□ -1.54
FGD4-201ENST00000395740 ACTN1P12814 892 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 ATP6V1C1P21283 382 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 SH3BGRP55822 239 aaPredicted RBP5.44□□□□□ -1.54
FGD4-201ENST00000395740 RNASE9P60153 205 aaKnown RBP5.44□□□□□ -1.54
FGD4-201ENST00000395740 IL9RQ01113 521 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 CENPCQ03188 943 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 BIRC2Q13490 618 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 PTK6Q13882 451 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 DRAP1Q14919 205 aaPredicted RBP5.44□□□□□ -1.54
FGD4-201ENST00000395740 SIX1Q15475 284 aaPredicted RBP5.44□□□□□ -1.54
FGD4-201ENST00000395740 ACCSLQ4AC99 568 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 TBC1D9BQ66K14 1250 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 VSTM1Q6UX27 236 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 MIGA2Q7L4E1 593 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 SDCCAG8Q86SQ7 713 aaPredicted RBP5.44□□□□□ -1.54
FGD4-201ENST00000395740 SESTD1Q86VW0 696 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 FAM186BQ8IYM0 893 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 TGFBRAP1Q8WUH2 860 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 DCAF4Q8WV16 495 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 ARHGEF2Q92974 986 aaKnown RBP5.44□□□□□ -1.54
FGD4-201ENST00000395740 TBC1D31Q96DN5 1066 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 NAF1Q96HR8 494 aaKnown RBP5.44□□□□□ -1.54
FGD4-201ENST00000395740 SEMA4AQ9H3S1 761 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 PSTPIP2Q9H939 334 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 QTRT2Q9H974 415 aaKnown RBP5.44□□□□□ -1.54
FGD4-201ENST00000395740 RNPEPL1Q9HAU8 725 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 ERVK-5Q9HDB9 667 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 LRRC4BQ9NT99 713 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 ABCF3Q9NUQ8 709 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 ADAM22Q9P0K1 906 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 CTTNBP2NLQ9P2B4 639 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 NARFQ9UHQ1 456 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 DNAJC12Q9UKB3 198 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 AGAP1Q9UPQ3 857 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 SNX24Q9Y343 169 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 USH1CQ9Y6N9 552 aa5.44□□□□□ -1.54
FGD4-201ENST00000395740 ZNFX1Q9P2E3 1918 aaKnown RBP5.44□□□□□ -1.54
FGD4-201ENST00000395740 TAF1LQ8IZX4 1826 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 USP17L5A8MUK1 530 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 TGFB1I1O43294 461 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 ZBED4O75132 1171 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 MED24O75448 989 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 ECEL1O95672 775 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 CYP1A2P05177 515 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 GSTA2P09210 222 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 SPATA31C1P0DKV0 1188 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 PAX7P23759 505 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 TM4SF1P30408 202 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 ALDH3A1P30838 453 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 SLC1A1P43005 524 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 RHBDL3P58872 404 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 IFI35P80217 286 aaPredicted RBP5.43□□□□□ -1.54
FGD4-201ENST00000395740 FOXK1P85037 733 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 ARID5AQ03989 594 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 CETN1Q12798 172 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 CBLBQ13191 982 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 CTTNQ14247 550 aaKnown RBP5.43□□□□□ -1.54
FGD4-201ENST00000395740 RRP1BQ14684 758 aaKnown RBP5.43□□□□□ -1.54
FGD4-201ENST00000395740 ZRSR2Q15696 482 aaKnown RBP5.43□□□□□ -1.54
FGD4-201ENST00000395740 ANKRD20A2Q5SQ80 823 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 ANKRD20A1Q5TYW2 823 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 ANKRD20A3Q5VUR7 823 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 FAM91A1Q658Y4 838 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 PNMA8AQ86V59 439 aaPredicted RBP5.43□□□□□ -1.54
FGD4-201ENST00000395740 CATSPER3Q86XQ3 398 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 NELFCDQ8IXH7 590 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.43□□□□□ -1.54
FGD4-201ENST00000395740 DHX38Q92620 1227 aaKnown RBP5.43□□□□□ -1.54
FGD4-201ENST00000395740 TTC25Q96NG3 672 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 ZNF570Q96NI8 536 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 PHF12Q96QT6 1004 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 TRAIPQ9BWF2 469 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 STRA6Q9BX79 667 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 FGFBP2Q9BYJ0 223 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 CYP39A1Q9NYL5 469 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 ZFATQ9P243 1243 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 SMG5Q9UPR3 1016 aaKnown RBP5.43□□□□□ -1.54
FGD4-201ENST00000395740 TMEM120BA0PK00 339 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 POTECB2RU33 542 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 PDLIM1O00151 329 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 GNPATO15228 680 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 IL1BP01584 269 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 SSBP05455 408 aaKnown RBP eCLIP5.43□□□□□ -1.54
FGD4-201ENST00000395740 ATP5BP06576 529 aaKnown RBP5.43□□□□□ -1.54
FGD4-201ENST00000395740 GOLGA8HP0CJ92 632 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 PECAM1P16284 738 aaPredicted RBP5.43□□□□□ -1.54
FGD4-201ENST00000395740 SREBF1P36956 1147 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 TNNI2P48788 182 aa5.43□□□□□ -1.54
FGD4-201ENST00000395740 CLCN2P51788 898 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms