RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 AGXT2Q9BYV1 514 aa4.59□□□□□ -1.68
HERC4-204ENST00000395198 GCOM2Q9BZD3 368 aaPredicted RBP4.59□□□□□ -1.68
HERC4-204ENST00000395198 EHMT1Q9H9B1 1298 aa4.59□□□□□ -1.68
HERC4-204ENST00000395198 CCDC177Q9NQR7 707 aaPredicted RBP4.59□□□□□ -1.68
HERC4-204ENST00000395198 ZNF446Q9NWS9 450 aa4.59□□□□□ -1.68
HERC4-204ENST00000395198 ATPIF1Q9UII2 106 aa4.59□□□□□ -1.68
HERC4-204ENST00000395198 PCDHGA9Q9Y5G4 932 aaKnown RBP4.59□□□□□ -1.68
HERC4-204ENST00000395198 PCDHGA8Q9Y5G5 932 aa4.59□□□□□ -1.68
HERC4-204ENST00000395198 PCDHGA7Q9Y5G6 932 aa4.59□□□□□ -1.68
HERC4-204ENST00000395198 PCDHGA6Q9Y5G7 932 aa4.59□□□□□ -1.68
HERC4-204ENST00000395198 PCDHGA3Q9Y5H0 932 aa4.59□□□□□ -1.68
HERC4-204ENST00000395198 LOC105371267A0A1B0GV96 52 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 YKT6O15498 198 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 CYP27B1O15528 508 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 EXTL3O43909 919 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 LILRB5O75023 590 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 SEC22BO75396 215 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 RFPL3O75679 317 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 FGF18O76093 207 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 SGPL1O95470 568 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 LTFP02788 710 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 URODP06132 367 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 CCR1P32246 355 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 PRSS12P56730 875 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 HNRNPUQ00839 825 aaKnown RBP eCLIP4.58□□□□□ -1.68
HERC4-204ENST00000395198 CCDC38Q502W7 563 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 FDX2Q6P4F2 183 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 DCLRE1AQ6PJP8 1040 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 SLC22A25Q6T423 547 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 SAMD7Q7Z3H4 446 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 CDH26Q8IXH8 852 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 REXO1Q8N1G1 1221 aaKnown RBP4.58□□□□□ -1.68
HERC4-204ENST00000395198 B4GALNT2Q8NHY0 566 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 ZNF296Q8WUU4 475 aaPredicted RBP4.58□□□□□ -1.68
HERC4-204ENST00000395198 RAPGEF5Q92565 580 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 ZNF566Q969W8 418 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 VWCEQ96DN2 955 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 GAS2L1Q99501 681 aaPredicted RBP4.58□□□□□ -1.68
HERC4-204ENST00000395198 ACO2Q99798 780 aaKnown RBP4.58□□□□□ -1.68
HERC4-204ENST00000395198 C5AR2Q9P296 337 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 ANKRD6Q9Y2G4 727 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 R3HCC1Q9Y3T6 440 aaKnown RBP4.58□□□□□ -1.68
HERC4-204ENST00000395198 CLRN2A0PK11 232 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 YY1P25490 414 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 KRT9P35527 623 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 IL15P40933 162 aaPredicted RBP4.58□□□□□ -1.68
HERC4-204ENST00000395198 HTD2P86397 168 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 KDSRQ06136 332 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 TLR1Q15399 786 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 TXNRD3Q86VQ6 643 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 GJD3Q8N144 294 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 OR52K1Q8NGK4 314 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 NANOS1Q8WY41 292 aaKnown RBP4.58□□□□□ -1.68
HERC4-204ENST00000395198 KISS1RQ969F8 398 aaPredicted RBP4.58□□□□□ -1.68
HERC4-204ENST00000395198 ARL5BQ96KC2 179 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 ADAD1Q96M93 576 aaKnown RBP4.58□□□□□ -1.68
HERC4-204ENST00000395198 AIFM3Q96NN9 605 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 OCSTAMPQ9BR26 566 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 RXFP3Q9NSD7 469 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 TUBA8Q9NY65 449 aaPredicted RBP4.58□□□□□ -1.68
HERC4-204ENST00000395198 NINJ2Q9NZG7 142 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 A0A087X0M5 115 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 A0A1B0GX30 115 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 LRRC14BA6NHZ5 514 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 NVLO15381 856 aaKnown RBP4.58□□□□□ -1.68
HERC4-204ENST00000395198 DAB1O75553 588 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 PLATP00750 562 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 CASTP20810 708 aaKnown RBP4.58□□□□□ -1.68
HERC4-204ENST00000395198 PSMC4P43686 418 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 AFF3P51826 1226 aaKnown RBP4.58□□□□□ -1.68
HERC4-204ENST00000395198 CACNB3P54284 484 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 PRKCZQ05513 592 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 LRRFIP1Q32MZ4 808 aaKnown RBP4.58□□□□□ -1.68
HERC4-204ENST00000395198 CFAP221Q4G0U5 840 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 CCDC102BQ68D86 513 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 KRT74Q7RTS7 529 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 PACS2Q86VP3 889 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 CCAR2Q8N163 923 aaKnown RBP4.58□□□□□ -1.68
HERC4-204ENST00000395198 MFSD2AQ8NA29 543 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 ZNF671Q8TAW3 534 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 BCAS4Q8TDM0 211 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 ZFAND2BQ8WV99 257 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 DNAAF4Q8WXU2 420 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 TMEM74Q96NL1 305 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 CTAGE1Q96RT6 745 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 TREX2Q9BQ50 279 aaPredicted RBP4.58□□□□□ -1.68
HERC4-204ENST00000395198 SORBS1Q9BX66 1292 aaKnown RBP4.58□□□□□ -1.68
HERC4-204ENST00000395198 UNC93B1Q9H1C4 597 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 SERINC1Q9NRX5 453 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 DECR2Q9NUI1 292 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 RCAN3Q9UKA8 241 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 VAV3Q9UKW4 847 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 NUDCQ9Y266 331 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 CFL2Q9Y281 166 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 ZNF644Q9H582 1327 aaPredicted RBP4.58□□□□□ -1.68
HERC4-204ENST00000395198 BCORL1Q5H9F3 1711 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 UBE2CO00762 179 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 POLR2DO15514 142 aaKnown RBP4.58□□□□□ -1.68
HERC4-204ENST00000395198 STRNO43815 780 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 PRPSAP2O60256 369 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms