RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 ZMYM2Q9UBW7 1377 aa21.98■■□□□ 1.11
UPK3B-203ENST00000394849 SPTLC1O15269 473 aa21.97■■□□□ 1.11
UPK3B-203ENST00000394849 ZMYND10O75800 440 aa21.97■■□□□ 1.11
UPK3B-203ENST00000394849 SPATA31D3P0C874 917 aa21.97■■□□□ 1.11
UPK3B-203ENST00000394849 MLH1P40692 756 aa21.97■■□□□ 1.11
UPK3B-203ENST00000394849 MAGEA9P43362 315 aa21.97■■□□□ 1.11
UPK3B-203ENST00000394849 MXD4Q14582 209 aaPredicted RBP21.97■■□□□ 1.11
UPK3B-203ENST00000394849 SPATA31D4Q6ZUB0 917 aa21.97■■□□□ 1.11
UPK3B-203ENST00000394849 MTSS1LQ765P7 747 aa21.97■■□□□ 1.11
UPK3B-203ENST00000394849 FERMT3Q86UX7 667 aa21.97■■□□□ 1.11
UPK3B-203ENST00000394849 SUMF1Q8NBK3 374 aa21.97■■□□□ 1.11
UPK3B-203ENST00000394849 KCNB2Q92953 911 aa21.97■■□□□ 1.11
UPK3B-203ENST00000394849 TMEM143Q96AN5 459 aa21.97■■□□□ 1.11
UPK3B-203ENST00000394849 BCO2Q9BYV7 579 aa21.97■■□□□ 1.11
UPK3B-203ENST00000394849 FSHRP23945 695 aa21.96■■□□□ 1.11
UPK3B-203ENST00000394849 PRKCQQ04759 706 aa21.96■■□□□ 1.11
UPK3B-203ENST00000394849 POU5F1BQ06416 359 aa21.96■■□□□ 1.11
UPK3B-203ENST00000394849 FUT10Q6P4F1 479 aa21.96■■□□□ 1.11
UPK3B-203ENST00000394849 RSPO2Q6UXX9 243 aaPredicted RBP21.96■■□□□ 1.11
UPK3B-203ENST00000394849 C4orf19Q8IY42 314 aa21.96■■□□□ 1.11
UPK3B-203ENST00000394849 BLIDQ8IZY5 108 aa21.96■■□□□ 1.11
UPK3B-203ENST00000394849 DAGLBQ8NCG7 672 aa21.96■■□□□ 1.11
UPK3B-203ENST00000394849 JAKMIP1Q96N16 626 aaKnown RBP21.96■■□□□ 1.11
UPK3B-203ENST00000394849 TRIM6Q9C030 488 aaPredicted RBP21.96■■□□□ 1.11
UPK3B-203ENST00000394849 CSRNP2Q9H175 543 aa21.96■■□□□ 1.11
UPK3B-203ENST00000394849 SLKQ9H2G2 1235 aaPredicted RBP21.96■■□□□ 1.11
UPK3B-203ENST00000394849 ADAM28Q9UKQ2 775 aa21.96■■□□□ 1.11
UPK3B-203ENST00000394849 KANSL1LA0AUZ9 987 aa21.95■■□□□ 1.1
UPK3B-203ENST00000394849 HNRNPA1P09651 372 aaKnown RBP eCLIP21.95■■□□□ 1.1
UPK3B-203ENST00000394849 SCNN1GP51170 649 aa21.95■■□□□ 1.1
UPK3B-203ENST00000394849 EVCP57679 992 aa21.95■■□□□ 1.1
UPK3B-203ENST00000394849 PTENP60484 403 aa21.95■■□□□ 1.1
UPK3B-203ENST00000394849 PFKPQ01813 784 aa21.95■■□□□ 1.1
UPK3B-203ENST00000394849 TFDP1Q14186 410 aa21.95■■□□□ 1.1
UPK3B-203ENST00000394849 EMC2Q15006 297 aa21.95■■□□□ 1.1
UPK3B-203ENST00000394849 SECISBP2LQ93073 1101 aaKnown RBP21.95■■□□□ 1.1
UPK3B-203ENST00000394849 FOXQ1Q9C009 403 aa21.95■■□□□ 1.1
UPK3B-203ENST00000394849 CDH7Q9ULB5 785 aa21.95■■□□□ 1.1
UPK3B-203ENST00000394849 PCDHGA2Q9Y5H1 932 aa21.95■■□□□ 1.1
UPK3B-203ENST00000394849 EPG5Q9HCE0 2579 aa21.95■■□□□ 1.1
UPK3B-203ENST00000394849 TPRP12270 2363 aaKnown RBP21.94■■□□□ 1.1
UPK3B-203ENST00000394849 M0R2N6 131 aa21.94■■□□□ 1.1
UPK3B-203ENST00000394849 EML1O00423 815 aa21.94■■□□□ 1.1
UPK3B-203ENST00000394849 LAMTOR5O43504 91 aa21.94■■□□□ 1.1
UPK3B-203ENST00000394849 TSPAN1O60635 241 aa21.94■■□□□ 1.1
UPK3B-203ENST00000394849 MYBP10242 640 aa21.94■■□□□ 1.1
UPK3B-203ENST00000394849 CPA1P15085 419 aa21.94■■□□□ 1.1
UPK3B-203ENST00000394849 YWHABP31946 246 aaKnown RBP21.94■■□□□ 1.1
UPK3B-203ENST00000394849 SSRP1Q08945 709 aaKnown RBP21.94■■□□□ 1.1
UPK3B-203ENST00000394849 KRT25Q7Z3Z0 450 aa21.94■■□□□ 1.1
UPK3B-203ENST00000394849 IFNLR1Q8IU57 520 aaPredicted RBP21.94■■□□□ 1.1
UPK3B-203ENST00000394849 ZFP42Q96MM3 310 aa21.94■■□□□ 1.1
UPK3B-203ENST00000394849 DDX23Q9BUQ8 820 aaKnown RBP21.94■■□□□ 1.1
UPK3B-203ENST00000394849 EIF2AQ9BY44 585 aaKnown RBP21.94■■□□□ 1.1
UPK3B-203ENST00000394849 GPR62Q9BZJ7 368 aa21.94■■□□□ 1.1
UPK3B-203ENST00000394849 RNF39Q9H2S5 420 aa21.94■■□□□ 1.1
UPK3B-203ENST00000394849 NCDNQ9UBB6 729 aa21.94■■□□□ 1.1
UPK3B-203ENST00000394849 VAV3Q9UKW4 847 aa21.94■■□□□ 1.1
UPK3B-203ENST00000394849 MYH15Q9Y2K3 1946 aa21.94■■□□□ 1.1
UPK3B-203ENST00000394849 SF3B1O75533 1304 aaKnown RBP eCLIP21.93■■□□□ 1.1
UPK3B-203ENST00000394849 DEXIO95424 95 aa21.93■■□□□ 1.1
UPK3B-203ENST00000394849 GLULP15104 373 aa21.93■■□□□ 1.1
UPK3B-203ENST00000394849 GCFC2P16383 781 aaKnown RBP21.93■■□□□ 1.1
UPK3B-203ENST00000394849 RPS6KB1P23443 525 aa21.93■■□□□ 1.1
UPK3B-203ENST00000394849 PSMA5P28066 241 aa21.93■■□□□ 1.1
UPK3B-203ENST00000394849 PDIA3P30101 505 aaKnown RBP21.93■■□□□ 1.1
UPK3B-203ENST00000394849 HOXA9P31269 272 aa21.93■■□□□ 1.1
UPK3B-203ENST00000394849 GPC5P78333 572 aa21.93■■□□□ 1.1
UPK3B-203ENST00000394849 GRIK3Q13003 919 aa21.93■■□□□ 1.1
UPK3B-203ENST00000394849 RSPO4Q2I0M5 234 aaPredicted RBP21.93■■□□□ 1.1
UPK3B-203ENST00000394849 VARS2Q5ST30 1063 aaKnown RBP21.93■■□□□ 1.1
UPK3B-203ENST00000394849 LIN9Q5TKA1 542 aa21.93■■□□□ 1.1
UPK3B-203ENST00000394849 MAML2Q8IZL2 1156 aaPredicted RBP21.93■■□□□ 1.1
UPK3B-203ENST00000394849 DCLK2Q8N568 766 aa21.93■■□□□ 1.1
UPK3B-203ENST00000394849 ZNF579Q8NAF0 562 aaKnown RBP21.93■■□□□ 1.1
UPK3B-203ENST00000394849 ATRIPQ8WXE1 791 aa21.93■■□□□ 1.1
UPK3B-203ENST00000394849 NELL2Q99435 816 aa21.93■■□□□ 1.1
UPK3B-203ENST00000394849 MTRQ99707 1265 aa21.93■■□□□ 1.1
UPK3B-203ENST00000394849 KCNMB3Q9NPA1 279 aa21.93■■□□□ 1.1
UPK3B-203ENST00000394849 SPATA6Q9NWH7 488 aaPredicted RBP21.93■■□□□ 1.1
UPK3B-203ENST00000394849 TBX3O15119 743 aa21.92■■□□□ 1.1
UPK3B-203ENST00000394849 TADA2AO75478 443 aa21.92■■□□□ 1.1
UPK3B-203ENST00000394849 EPHA7Q15375 998 aa21.92■■□□□ 1.1
UPK3B-203ENST00000394849 MLF2Q15773 248 aaPredicted RBP21.92■■□□□ 1.1
UPK3B-203ENST00000394849 PPP4R3AQ6IN85 833 aa21.92■■□□□ 1.1
UPK3B-203ENST00000394849 PDXDC1Q6P996 788 aa21.92■■□□□ 1.1
UPK3B-203ENST00000394849 NAP1L4Q99733 375 aaKnown RBP21.92■■□□□ 1.1
UPK3B-203ENST00000394849 LXNQ9BS40 222 aa21.92■■□□□ 1.1
UPK3B-203ENST00000394849 NFKBIZQ9BYH8 718 aa21.92■■□□□ 1.1
UPK3B-203ENST00000394849 ZSWIM4Q9H7M6 989 aa21.92■■□□□ 1.1
UPK3B-203ENST00000394849 MIOSQ9NXC5 875 aa21.92■■□□□ 1.1
UPK3B-203ENST00000394849 GPR179Q6PRD1 2367 aa21.91■■□□□ 1.1
UPK3B-203ENST00000394849 POTEMA6NI47 508 aa21.91■■□□□ 1.1
UPK3B-203ENST00000394849 PRR5-ARHGAP8B1AHC4 643 aa21.91■■□□□ 1.1
UPK3B-203ENST00000394849 INO80B-WBP1J3KQ70 363 aa21.91■■□□□ 1.1
UPK3B-203ENST00000394849 XYLBO75191 536 aa21.91■■□□□ 1.1
UPK3B-203ENST00000394849 CCT2P78371 535 aaKnown RBP21.91■■□□□ 1.1
UPK3B-203ENST00000394849 ARHGAP8P85298 464 aa21.91■■□□□ 1.1
UPK3B-203ENST00000394849 SNW1Q13573 536 aaKnown RBP21.91■■□□□ 1.1
UPK3B-203ENST00000394849 SLC44A4Q53GD3 710 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms