RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 FSBPO95073 299 aa17.24■□□□□ 0.35
PCDH1-203ENST00000394536 CYFIP1Q7L576 1253 aa17.24■□□□□ 0.35
PCDH1-203ENST00000394536 DEPTORQ8TB45 409 aa17.24■□□□□ 0.35
PCDH1-203ENST00000394536 ATP8B4Q8TF62 1192 aa17.24■□□□□ 0.35
PCDH1-203ENST00000394536 AGBL1Q96MI9 1066 aa17.24■□□□□ 0.35
PCDH1-203ENST00000394536 CRAMP1Q96RY5 1269 aa17.24■□□□□ 0.35
PCDH1-203ENST00000394536 TMEM117Q9H0C3 514 aa17.24■□□□□ 0.35
PCDH1-203ENST00000394536 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.24■□□□□ 0.35
PCDH1-203ENST00000394536 MARF1Q9Y4F3 1742 aaKnown RBP17.24■□□□□ 0.35
PCDH1-203ENST00000394536 SUGP1Q8IWZ8 645 aaKnown RBP17.24■□□□□ 0.35
PCDH1-203ENST00000394536 FUKQ8N0W3 1084 aa17.24■□□□□ 0.35
PCDH1-203ENST00000394536 SLC24A3Q9HC58 644 aa17.24■□□□□ 0.35
PCDH1-203ENST00000394536 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.24■□□□□ 0.35
PCDH1-203ENST00000394536 DISP2A7MBM2 1401 aa17.24■□□□□ 0.35
PCDH1-203ENST00000394536 PFASO15067 1338 aa17.23■□□□□ 0.35
PCDH1-203ENST00000394536 ZC3H4Q9UPT8 1303 aaKnown RBP17.23■□□□□ 0.35
PCDH1-203ENST00000394536 IGSF9BQ9UPX0 1349 aa17.23■□□□□ 0.35
PCDH1-203ENST00000394536 EIF3DO15371 548 aaKnown RBP eCLIP17.23■□□□□ 0.35
PCDH1-203ENST00000394536 SNRNP35Q16560 246 aaKnown RBP17.23■□□□□ 0.35
PCDH1-203ENST00000394536 CNPY4Q8N129 248 aa17.23■□□□□ 0.35
PCDH1-203ENST00000394536 FBXL13Q8NEE6 735 aa17.23■□□□□ 0.35
PCDH1-203ENST00000394536 FAM129AQ9BZQ8 928 aa17.23■□□□□ 0.35
PCDH1-203ENST00000394536 TOPORSQ9NS56 1045 aaPredicted RBP17.23■□□□□ 0.35
PCDH1-203ENST00000394536 DCTN4Q9UJW0 460 aa17.23■□□□□ 0.35
PCDH1-203ENST00000394536 L3MBTL1Q9Y468 752 aa17.23■□□□□ 0.35
PCDH1-203ENST00000394536 A0A0A6YYK5 440 aaPredicted RBP17.23■□□□□ 0.35
PCDH1-203ENST00000394536 ERFP50548 548 aa17.23■□□□□ 0.35
PCDH1-203ENST00000394536 ITGA8P53708 1063 aa17.23■□□□□ 0.35
PCDH1-203ENST00000394536 ANKRD20A3Q5VUR7 823 aa17.23■□□□□ 0.35
PCDH1-203ENST00000394536 LRRC57Q8N9N7 239 aa17.23■□□□□ 0.35
PCDH1-203ENST00000394536 PRPF38AQ8NAV1 312 aaKnown RBP17.23■□□□□ 0.35
PCDH1-203ENST00000394536 RMDN3Q96TC7 470 aa17.23■□□□□ 0.35
PCDH1-203ENST00000394536 ALG13Q9NP73 1137 aaKnown RBP17.23■□□□□ 0.35
PCDH1-203ENST00000394536 OLFML3Q9NRN5 406 aa17.23■□□□□ 0.35
PCDH1-203ENST00000394536 USP15Q9Y4E8 981 aaPredicted RBP17.23■□□□□ 0.35
PCDH1-203ENST00000394536 APBA3O96018 575 aa17.23■□□□□ 0.35
PCDH1-203ENST00000394536 KRT1P04264 644 aa17.23■□□□□ 0.35
PCDH1-203ENST00000394536 ELF1P32519 619 aa17.23■□□□□ 0.35
PCDH1-203ENST00000394536 OTOP1Q7RTM1 612 aa17.23■□□□□ 0.35
PCDH1-203ENST00000394536 C4orf33Q8N1A6 199 aa17.23■□□□□ 0.35
PCDH1-203ENST00000394536 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.23■□□□□ 0.35
PCDH1-203ENST00000394536 NOD2Q9HC29 1040 aa17.23■□□□□ 0.35
PCDH1-203ENST00000394536 TPX2Q9ULW0 747 aaKnown RBP17.23■□□□□ 0.35
PCDH1-203ENST00000394536 USP20Q9Y2K6 914 aa17.23■□□□□ 0.35
PCDH1-203ENST00000394536 DIAPH2O60879 1101 aa17.22■□□□□ 0.35
PCDH1-203ENST00000394536 ZBED4O75132 1171 aa17.22■□□□□ 0.35
PCDH1-203ENST00000394536 YWHABP31946 246 aaKnown RBP17.22■□□□□ 0.35
PCDH1-203ENST00000394536 IZUMO3Q5VZ72 239 aa17.22■□□□□ 0.35
PCDH1-203ENST00000394536 SUPT20HQ8NEM7 779 aa17.22■□□□□ 0.35
PCDH1-203ENST00000394536 RSAD2Q8WXG1 361 aa17.22■□□□□ 0.35
PCDH1-203ENST00000394536 CDC42EP4Q9H3Q1 356 aaKnown RBP17.22■□□□□ 0.35
PCDH1-203ENST00000394536 KCNH7Q9NS40 1196 aa17.22■□□□□ 0.35
PCDH1-203ENST00000394536 SUGT1Q9Y2Z0 365 aa17.22■□□□□ 0.35
PCDH1-203ENST00000394536 UBOX5O94941 541 aa17.22■□□□□ 0.35
PCDH1-203ENST00000394536 POLGP54098 1239 aaPredicted RBP17.22■□□□□ 0.35
PCDH1-203ENST00000394536 SPATA21Q7Z572 469 aa17.22■□□□□ 0.35
PCDH1-203ENST00000394536 RPAINQ86UA6 219 aa17.22■□□□□ 0.35
PCDH1-203ENST00000394536 ETNPPLQ8TBG4 499 aa17.22■□□□□ 0.35
PCDH1-203ENST00000394536 PIK3R5Q8WYR1 880 aa17.22■□□□□ 0.35
PCDH1-203ENST00000394536 GAKO14976 1311 aa17.22■□□□□ 0.35
PCDH1-203ENST00000394536 FOXO6A8MYZ6 492 aa17.22■□□□□ 0.35
PCDH1-203ENST00000394536 RARAP10276 462 aa17.22■□□□□ 0.35
PCDH1-203ENST00000394536 VTI1AQ96AJ9 217 aa17.22■□□□□ 0.35
PCDH1-203ENST00000394536 HES6Q96HZ4 224 aa17.22■□□□□ 0.35
PCDH1-203ENST00000394536 PRMT6Q96LA8 375 aaPredicted RBP17.22■□□□□ 0.35
PCDH1-203ENST00000394536 MAK16Q9BXY0 300 aaKnown RBP17.22■□□□□ 0.35
PCDH1-203ENST00000394536 C21orf2O43822 256 aa17.21■□□□□ 0.35
PCDH1-203ENST00000394536 SOX10P56693 466 aa17.21■□□□□ 0.35
PCDH1-203ENST00000394536 PPP3CAQ08209 521 aa17.21■□□□□ 0.35
PCDH1-203ENST00000394536 BBS9Q3SYG4 887 aa17.21■□□□□ 0.35
PCDH1-203ENST00000394536 SYCP2LQ5T4T6 812 aa17.21■□□□□ 0.35
PCDH1-203ENST00000394536 SNF8Q96H20 258 aa17.21■□□□□ 0.35
PCDH1-203ENST00000394536 ZBTB12Q9Y330 459 aaPredicted RBP17.21■□□□□ 0.35
PCDH1-203ENST00000394536 GOLGA8RI6L899 631 aa17.21■□□□□ 0.35
PCDH1-203ENST00000394536 IGF2BP3O00425 579 aaKnown RBP eCLIP17.21■□□□□ 0.35
PCDH1-203ENST00000394536 ATP2A2P16615 1042 aaKnown RBP17.21■□□□□ 0.35
PCDH1-203ENST00000394536 ACOT2P49753 483 aa17.21■□□□□ 0.35
PCDH1-203ENST00000394536 OSTNP61366 133 aa17.21■□□□□ 0.35
PCDH1-203ENST00000394536 GABPAQ06546 454 aa17.21■□□□□ 0.35
PCDH1-203ENST00000394536 Q4G0T1 1027 aa17.21■□□□□ 0.35
PCDH1-203ENST00000394536 MCF2L2Q86YR7 1114 aa17.21■□□□□ 0.35
PCDH1-203ENST00000394536 TATDN2Q93075 761 aa17.21■□□□□ 0.35
PCDH1-203ENST00000394536 PWWP2AQ96N64 755 aa17.21■□□□□ 0.35
PCDH1-203ENST00000394536 OSBPL7Q9BZF2 842 aa17.21■□□□□ 0.35
PCDH1-203ENST00000394536 NOP53Q9NZM5 478 aaKnown RBP17.21■□□□□ 0.35
PCDH1-203ENST00000394536 CTNNAL1Q9UBT7 734 aa17.21■□□□□ 0.35
PCDH1-203ENST00000394536 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.21■□□□□ 0.35
PCDH1-203ENST00000394536 DNM1LO00429 736 aa17.21■□□□□ 0.35
PCDH1-203ENST00000394536 PLS3P13797 630 aa17.21■□□□□ 0.35
PCDH1-203ENST00000394536 CHRNA5P30532 468 aa17.21■□□□□ 0.35
PCDH1-203ENST00000394536 PPP1R21Q6ZMI0 780 aa17.21■□□□□ 0.35
PCDH1-203ENST00000394536 SCARA5Q6ZMJ2 495 aa17.21■□□□□ 0.35
PCDH1-203ENST00000394536 PRELID2Q8N945 189 aa17.21■□□□□ 0.35
PCDH1-203ENST00000394536 STMN2Q93045 179 aa17.21■□□□□ 0.35
PCDH1-203ENST00000394536 MASTLQ96GX5 879 aa17.21■□□□□ 0.35
PCDH1-203ENST00000394536 GTPBP10A4D1E9 387 aaKnown RBP17.2■□□□□ 0.34
PCDH1-203ENST00000394536 KIAA0391O15091 583 aaKnown RBP17.2■□□□□ 0.34
PCDH1-203ENST00000394536 TLR3O15455 904 aaKnown RBP17.2■□□□□ 0.34
PCDH1-203ENST00000394536 ADRA2BP18089 450 aa17.2■□□□□ 0.34
PCDH1-203ENST00000394536 CALRP27797 417 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms