RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 hCG_1642624A0A1W2PR95 340 aa23.32■■□□□ 1.32
CLDND1-202ENST00000394180 PHF2O75151 1096 aa23.32■■□□□ 1.32
CLDND1-202ENST00000394180 PTK2Q05397 1052 aa23.32■■□□□ 1.32
CLDND1-202ENST00000394180 AP1B1Q10567 949 aa23.32■■□□□ 1.32
CLDND1-202ENST00000394180 GIT2Q14161 759 aa23.32■■□□□ 1.32
CLDND1-202ENST00000394180 SNX30Q5VWJ9 437 aa23.32■■□□□ 1.32
CLDND1-202ENST00000394180 PHC3Q8NDX5 983 aa23.32■■□□□ 1.32
CLDND1-202ENST00000394180 SDR42E1Q8WUS8 393 aa23.32■■□□□ 1.32
CLDND1-202ENST00000394180 NFKBIEO00221 500 aa23.31■■□□□ 1.32
CLDND1-202ENST00000394180 ALAS1P13196 640 aa23.31■■□□□ 1.32
CLDND1-202ENST00000394180 STX2P32856 288 aa23.31■■□□□ 1.32
CLDND1-202ENST00000394180 CNPY1Q3B7I2 92 aa23.31■■□□□ 1.32
CLDND1-202ENST00000394180 ZNF571Q7Z3V5 609 aaPredicted RBP23.31■■□□□ 1.32
CLDND1-202ENST00000394180 EIF4E1BA6NMX2 242 aaKnown RBP23.31■■□□□ 1.32
CLDND1-202ENST00000394180 DDX3YO15523 660 aaKnown RBP23.31■■□□□ 1.32
CLDND1-202ENST00000394180 TMCC1O94876 653 aa23.31■■□□□ 1.32
CLDND1-202ENST00000394180 TTLL1O95922 423 aa23.31■■□□□ 1.32
CLDND1-202ENST00000394180 OR52Z1P0C646 297 aa23.31■■□□□ 1.32
CLDND1-202ENST00000394180 SERPINB4P48594 390 aa23.31■■□□□ 1.32
CLDND1-202ENST00000394180 SLC34A1Q06495 639 aa23.31■■□□□ 1.32
CLDND1-202ENST00000394180 CCDC6Q16204 474 aa23.31■■□□□ 1.32
CLDND1-202ENST00000394180 C4orf50Q6ZRC1 276 aa23.31■■□□□ 1.32
CLDND1-202ENST00000394180 ZC3H3Q8IXZ2 948 aaKnown RBP23.31■■□□□ 1.32
CLDND1-202ENST00000394180 SLC17A8Q8NDX2 589 aa23.31■■□□□ 1.32
CLDND1-202ENST00000394180 ART4Q93070 314 aa23.31■■□□□ 1.32
CLDND1-202ENST00000394180 PITPNM3Q9BZ71 974 aa23.31■■□□□ 1.32
CLDND1-202ENST00000394180 LGALS13Q9UHV8 139 aa23.31■■□□□ 1.32
CLDND1-202ENST00000394180 CETN3O15182 167 aa23.3■■□□□ 1.32
CLDND1-202ENST00000394180 SLC18A1P54219 525 aa23.3■■□□□ 1.32
CLDND1-202ENST00000394180 RNASELQ05823 741 aaKnown RBP23.3■■□□□ 1.32
CLDND1-202ENST00000394180 DEUP1Q05D60 604 aa23.3■■□□□ 1.32
CLDND1-202ENST00000394180 PABPC4Q13310 644 aaKnown RBP eCLIP23.3■■□□□ 1.324e-9■□□□□ 10.6
CLDND1-202ENST00000394180 ENOX2Q16206 610 aaKnown RBP23.3■■□□□ 1.32
CLDND1-202ENST00000394180 ZNF398Q8TD17 642 aa23.3■■□□□ 1.32
CLDND1-202ENST00000394180 SCG3Q8WXD2 468 aaKnown RBP23.3■■□□□ 1.32
CLDND1-202ENST00000394180 TRIM31Q9BZY9 425 aa23.3■■□□□ 1.32
CLDND1-202ENST00000394180 CCDC113Q9H0I3 377 aa23.3■■□□□ 1.32
CLDND1-202ENST00000394180 ADGRA3Q8IWK6 1321 aa23.3■■□□□ 1.32
CLDND1-202ENST00000394180 NKIRAS1Q9NYS0 192 aa23.29■■□□□ 1.32
CLDND1-202ENST00000394180 NDUFA13Q9P0J0 144 aa23.29■■□□□ 1.32
CLDND1-202ENST00000394180 STX18Q9P2W9 335 aaKnown RBP23.29■■□□□ 1.32
CLDND1-202ENST00000394180 DBR1Q9UK59 544 aaKnown RBP23.29■■□□□ 1.32
CLDND1-202ENST00000394180 SNX24Q9Y343 169 aa23.29■■□□□ 1.32
CLDND1-202ENST00000394180 PCDHA3Q9Y5H8 950 aa23.29■■□□□ 1.32
CLDND1-202ENST00000394180 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.29■■□□□ 1.32
CLDND1-202ENST00000394180 TAC1P20366 129 aa23.29■■□□□ 1.32
CLDND1-202ENST00000394180 IL9RQ01113 521 aa23.29■■□□□ 1.32
CLDND1-202ENST00000394180 MCL1Q07820 350 aa23.29■■□□□ 1.32
CLDND1-202ENST00000394180 SF3A3Q12874 501 aaKnown RBP eCLIP23.29■■□□□ 1.32
CLDND1-202ENST00000394180 RASIP1Q5U651 963 aa23.29■■□□□ 1.32
CLDND1-202ENST00000394180 DAB2IPQ5VWQ8 1189 aa23.29■■□□□ 1.32
CLDND1-202ENST00000394180 PROCA1Q8NCQ7 364 aaPredicted RBP23.29■■□□□ 1.32
CLDND1-202ENST00000394180 ERP27Q96DN0 273 aa23.29■■□□□ 1.32
CLDND1-202ENST00000394180 MAST2Q6P0Q8 1798 aa23.29■■□□□ 1.32
CLDND1-202ENST00000394180 SMIM23A6NLE4 172 aa23.28■■□□□ 1.32
CLDND1-202ENST00000394180 BTBD19C9JJ37 291 aa23.28■■□□□ 1.32
CLDND1-202ENST00000394180 SMAPO00193 183 aa23.28■■□□□ 1.32
CLDND1-202ENST00000394180 FER1L6Q2WGJ9 1857 aa23.28■■□□□ 1.32
CLDND1-202ENST00000394180 DACT2Q5SW24 774 aa23.28■■□□□ 1.32
CLDND1-202ENST00000394180 LRRC74BQ6ZQY2 392 aa23.28■■□□□ 1.32
CLDND1-202ENST00000394180 MYOCDQ8IZQ8 938 aa23.28■■□□□ 1.32
CLDND1-202ENST00000394180 SYT17Q9BSW7 474 aa23.28■■□□□ 1.32
CLDND1-202ENST00000394180 ZCWPW1Q9H0M4 648 aa23.28■■□□□ 1.32
CLDND1-202ENST00000394180 CHKBQ9Y259 395 aa23.28■■□□□ 1.32
CLDND1-202ENST00000394180 SYNGAP1Q96PV0 1343 aa23.28■■□□□ 1.32
CLDND1-202ENST00000394180 USP17L3A6NCW0 530 aa23.28■■□□□ 1.32
CLDND1-202ENST00000394180 USP17L4A6NCW7 530 aa23.28■■□□□ 1.32
CLDND1-202ENST00000394180 T-ENOLP0DO92 83 aa23.28■■□□□ 1.32
CLDND1-202ENST00000394180 SCNN1DP51172 638 aa23.28■■□□□ 1.32
CLDND1-202ENST00000394180 PPATQ06203 517 aa23.28■■□□□ 1.32
CLDND1-202ENST00000394180 MOGSQ13724 837 aa23.28■■□□□ 1.32
CLDND1-202ENST00000394180 LRRC14Q15048 493 aa23.28■■□□□ 1.32
CLDND1-202ENST00000394180 STRIP1Q5VSL9 837 aa23.28■■□□□ 1.32
CLDND1-202ENST00000394180 USP17L1Q7RTZ2 530 aa23.28■■□□□ 1.32
CLDND1-202ENST00000394180 TRIM42Q8IWZ5 723 aa23.28■■□□□ 1.32
CLDND1-202ENST00000394180 ARMCX3Q9UH62 379 aaPredicted RBP23.28■■□□□ 1.32
CLDND1-202ENST00000394180 RAD17O75943 681 aa23.27■■□□□ 1.32
CLDND1-202ENST00000394180 MAP7Q14244 749 aa23.27■■□□□ 1.32
CLDND1-202ENST00000394180 LIN52Q52LA3 116 aa23.27■■□□□ 1.32
CLDND1-202ENST00000394180 KIAA0825Q8IV33 1275 aa23.27■■□□□ 1.32
CLDND1-202ENST00000394180 SYCP3Q8IZU3 236 aa23.27■■□□□ 1.32
CLDND1-202ENST00000394180 LRRC43Q8N309 656 aa23.27■■□□□ 1.32
CLDND1-202ENST00000394180 PLIN2Q99541 437 aa23.27■■□□□ 1.32
CLDND1-202ENST00000394180 KIAA1683Q9H0B3 1180 aa23.27■■□□□ 1.32
CLDND1-202ENST00000394180 EPB41L1Q9H4G0 881 aa23.27■■□□□ 1.32
CLDND1-202ENST00000394180 PREBQ9HCU5 417 aa23.27■■□□□ 1.32
CLDND1-202ENST00000394180 PCDHA6Q9UN73 950 aa23.27■■□□□ 1.32
CLDND1-202ENST00000394180 PCDHA8Q9Y5H6 950 aa23.27■■□□□ 1.32
CLDND1-202ENST00000394180 PASKQ96RG2 1323 aa23.27■■□□□ 1.32
CLDND1-202ENST00000394180 PALM3A6NDB9 673 aaPredicted RBP23.27■■□□□ 1.31
CLDND1-202ENST00000394180 MAP3K7O43318 606 aa23.27■■□□□ 1.31
CLDND1-202ENST00000394180 ZWINTO95229 277 aa23.27■■□□□ 1.31
CLDND1-202ENST00000394180 FAM200BP0CF97 657 aa23.27■■□□□ 1.31
CLDND1-202ENST00000394180 SLC45A4Q5BKX6 768 aa23.27■■□□□ 1.31
CLDND1-202ENST00000394180 CTNNBL1Q8WYA6 563 aaPredicted RBP23.27■■□□□ 1.31
CLDND1-202ENST00000394180 ZNF184Q99676 751 aaPredicted RBP23.27■■□□□ 1.31
CLDND1-202ENST00000394180 DHX36Q9H2U1 1008 aaKnown RBP23.27■■□□□ 1.31
CLDND1-202ENST00000394180 HAO1Q9UJM8 370 aa23.27■■□□□ 1.31
CLDND1-202ENST00000394180 G3BP2Q9UN86 482 aaKnown RBP23.27■■□□□ 1.31
CLDND1-202ENST00000394180 MYBL1P10243 752 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms