RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 CHRNB2P17787 502 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 ABCB4P21439 1286 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 RFC5P40937 340 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 GPC5P78333 572 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 NEDD9Q14511 834 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 CLUL1Q15846 466 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 GSPT2Q8IYD1 628 aaKnown RBP15.43■□□□□ 0.06
MKS1-203ENST00000393120 PPM1KQ8N3J5 372 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 PSPC1Q8WXF1 523 aaKnown RBP15.43■□□□□ 0.06
MKS1-203ENST00000393120 KAT5Q92993 513 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 CCDC102AQ96A19 550 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 ARHGEF26Q96DR7 871 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 ARID2Q68CP9 1835 aa15.42■□□□□ 0.06
MKS1-203ENST00000393120 LCTP09848 1927 aa15.42■□□□□ 0.06
MKS1-203ENST00000393120 PAPPA2Q9BXP8 1791 aa15.42■□□□□ 0.06
MKS1-203ENST00000393120 GSTTP1A0A1W2PQM5 241 aa15.42■□□□□ 0.06
MKS1-203ENST00000393120 SOWAHBA6NEL2 793 aa15.42■□□□□ 0.06
MKS1-203ENST00000393120 BHMG1C9JSJ3 638 aaPredicted RBP15.42■□□□□ 0.06
MKS1-203ENST00000393120 FARP2O94887 1054 aaPredicted RBP15.42■□□□□ 0.06
MKS1-203ENST00000393120 HEXIM1O94992 359 aaKnown RBP15.42■□□□□ 0.06
MKS1-203ENST00000393120 SGPL1O95470 568 aa15.42■□□□□ 0.06
MKS1-203ENST00000393120 UBA1P22314 1058 aaKnown RBP15.42■□□□□ 0.06
MKS1-203ENST00000393120 GCNT1Q02742 428 aa15.42■□□□□ 0.06
MKS1-203ENST00000393120 STRN3Q13033 797 aa15.42■□□□□ 0.06
MKS1-203ENST00000393120 PSMD6Q15008 389 aa15.42■□□□□ 0.06
MKS1-203ENST00000393120 TARBP2Q15633 366 aaKnown RBP15.42■□□□□ 0.06
MKS1-203ENST00000393120 SLFN12LQ6IEE8 588 aa15.42■□□□□ 0.06
MKS1-203ENST00000393120 C11orf63Q6NUN7 778 aa15.42■□□□□ 0.06
MKS1-203ENST00000393120 SEPT14Q6ZU15 432 aa15.42■□□□□ 0.06
MKS1-203ENST00000393120 SND1Q7KZF4 910 aaKnown RBP eCLIP15.42■□□□□ 0.06
MKS1-203ENST00000393120 NOP9Q86U38 636 aaKnown RBP15.42■□□□□ 0.06
MKS1-203ENST00000393120 ERO1BQ86YB8 467 aa15.42■□□□□ 0.06
MKS1-203ENST00000393120 TAS1R2Q8TE23 839 aa15.42■□□□□ 0.06
MKS1-203ENST00000393120 AFAP1L1Q8TED9 768 aa15.42■□□□□ 0.06
MKS1-203ENST00000393120 ZNF526Q8TF50 670 aaPredicted RBP15.42■□□□□ 0.06
MKS1-203ENST00000393120 POP1Q99575 1024 aaKnown RBP15.42■□□□□ 0.06
MKS1-203ENST00000393120 NRBP2Q9NSY0 501 aa15.42■□□□□ 0.06
MKS1-203ENST00000393120 SEPT11Q9NVA2 429 aaKnown RBP15.42■□□□□ 0.06
MKS1-203ENST00000393120 WDR81Q562E7 1941 aa15.42■□□□□ 0.06
MKS1-203ENST00000393120 DDX3YO15523 660 aaKnown RBP15.41■□□□□ 0.06
MKS1-203ENST00000393120 SLC25A27O95847 323 aa15.41■□□□□ 0.06
MKS1-203ENST00000393120 GLRA2P23416 452 aa15.41■□□□□ 0.06
MKS1-203ENST00000393120 COPB2P35606 906 aa15.41■□□□□ 0.06
MKS1-203ENST00000393120 LIG4P49917 911 aa15.41■□□□□ 0.06
MKS1-203ENST00000393120 PAK2Q13177 524 aa15.41■□□□□ 0.06
MKS1-203ENST00000393120 ALS2CLQ60I27 953 aa15.41■□□□□ 0.06
MKS1-203ENST00000393120 SLC7A3Q8WY07 619 aa15.41■□□□□ 0.06
MKS1-203ENST00000393120 BICD1Q96G01 975 aa15.41■□□□□ 0.06
MKS1-203ENST00000393120 PCDHB18PQ96TA0 734 aa15.41■□□□□ 0.06
MKS1-203ENST00000393120 FAM213AQ9BRX8 229 aa15.41■□□□□ 0.06
MKS1-203ENST00000393120 CARD9Q9H257 536 aa15.41■□□□□ 0.06
MKS1-203ENST00000393120 TMEM134Q9H6X4 195 aa15.41■□□□□ 0.06
MKS1-203ENST00000393120 EPB41L5Q9HCM4 733 aa15.41■□□□□ 0.06
MKS1-203ENST00000393120 VPS18Q9P253 973 aa15.41■□□□□ 0.06
MKS1-203ENST00000393120 COG5Q9UP83 839 aa15.41■□□□□ 0.06
MKS1-203ENST00000393120 NOC2LQ9Y3T9 749 aaKnown RBP15.41■□□□□ 0.06
MKS1-203ENST00000393120 AGPSO00116 658 aa15.41■□□□□ 0.06
MKS1-203ENST00000393120 CYP26A1O43174 497 aa15.41■□□□□ 0.06
MKS1-203ENST00000393120 CYP11B1P15538 503 aa15.41■□□□□ 0.06
MKS1-203ENST00000393120 USP8P40818 1118 aa15.41■□□□□ 0.06
MKS1-203ENST00000393120 RNASE9P60153 205 aaKnown RBP15.41■□□□□ 0.06
MKS1-203ENST00000393120 MRPS25P82663 173 aaKnown RBP15.41■□□□□ 0.06
MKS1-203ENST00000393120 CDR2Q01850 454 aa15.41■□□□□ 0.06
MKS1-203ENST00000393120 GUCY2DQ02846 1103 aa15.41■□□□□ 0.06
MKS1-203ENST00000393120 MORC4Q8TE76 937 aa15.41■□□□□ 0.06
MKS1-203ENST00000393120 CNKSR2Q8WXI2 1034 aa15.41■□□□□ 0.06
MKS1-203ENST00000393120 RPS6KC1Q96S38 1066 aa15.41■□□□□ 0.06
MKS1-203ENST00000393120 PCYT2Q99447 389 aa15.41■□□□□ 0.06
MKS1-203ENST00000393120 SLITRK6Q9H5Y7 841 aa15.41■□□□□ 0.06
MKS1-203ENST00000393120 PRDM4Q9UKN5 801 aa15.41■□□□□ 0.06
MKS1-203ENST00000393120 FAN1Q9Y2M0 1017 aa15.41■□□□□ 0.06
MKS1-203ENST00000393120 GOLGA6BA6NDN3 693 aa15.4■□□□□ 0.06
MKS1-203ENST00000393120 MIF4GDA9UHW6 222 aaKnown RBP15.4■□□□□ 0.06
MKS1-203ENST00000393120 ADM5C9JUS6 153 aa15.4■□□□□ 0.06
MKS1-203ENST00000393120 KRIT1O00522 736 aa15.4■□□□□ 0.06
MKS1-203ENST00000393120 RAD51CO43502 376 aa15.4■□□□□ 0.06
MKS1-203ENST00000393120 LDHAP00338 332 aaKnown RBP15.4■□□□□ 0.06
MKS1-203ENST00000393120 IRX3P78415 501 aaPredicted RBP15.4■□□□□ 0.06
MKS1-203ENST00000393120 FMO1Q01740 532 aa15.4■□□□□ 0.06
MKS1-203ENST00000393120 PPP2R5EQ16537 467 aa15.4■□□□□ 0.06
MKS1-203ENST00000393120 FAM160B1Q5W0V3 765 aa15.4■□□□□ 0.06
MKS1-203ENST00000393120 GADL1Q6ZQY3 521 aa15.4■□□□□ 0.06
MKS1-203ENST00000393120 SLC47A2Q86VL8 602 aa15.4■□□□□ 0.06
MKS1-203ENST00000393120 NCAPG2Q86XI2 1143 aa15.4■□□□□ 0.06
MKS1-203ENST00000393120 ANKRD13AQ8IZ07 590 aa15.4■□□□□ 0.06
MKS1-203ENST00000393120 MREGQ8N565 214 aa15.4■□□□□ 0.06
MKS1-203ENST00000393120 DEPTORQ8TB45 409 aa15.4■□□□□ 0.06
MKS1-203ENST00000393120 ASAP3Q8TDY4 903 aa15.4■□□□□ 0.06
MKS1-203ENST00000393120 TMEM143Q96AN5 459 aa15.4■□□□□ 0.06
MKS1-203ENST00000393120 GDAP1L1Q96MZ0 367 aa15.4■□□□□ 0.06
MKS1-203ENST00000393120 MPHOSPH6Q99547 160 aaKnown RBP15.4■□□□□ 0.06
MKS1-203ENST00000393120 ZMYND15Q9H091 742 aa15.4■□□□□ 0.06
MKS1-203ENST00000393120 TOPORSQ9NS56 1045 aaPredicted RBP15.4■□□□□ 0.06
MKS1-203ENST00000393120 KCNH4Q9UQ05 1017 aa15.4■□□□□ 0.06
MKS1-203ENST00000393120 SPDYE5A6NIY4 337 aa15.39■□□□□ 0.05
MKS1-203ENST00000393120 K7ERI5 159 aa15.39■□□□□ 0.05
MKS1-203ENST00000393120 SART1O43290 800 aaKnown RBP15.39■□□□□ 0.05
MKS1-203ENST00000393120 SORBS3O60504 671 aa15.39■□□□□ 0.05
MKS1-203ENST00000393120 CNMDO75829 334 aa15.39■□□□□ 0.05
MKS1-203ENST00000393120 CYP1A2P05177 515 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms