RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 CHD4Q14839 1912 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 YDJCA8MPS7 323 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 TGFB1I1O43294 461 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 CTNND1O60716 968 aaKnown RBP11.29□□□□□ -0.6
CALD1-203ENST00000393118 ECEL1O95672 775 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 CIITAP33076 1130 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 TRADDQ15628 312 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 CLUL1Q15846 466 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 UAP1Q16222 522 aaPredicted RBP11.29□□□□□ -0.6
CALD1-203ENST00000393118 HYIQ5T013 277 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 HSD17B14Q9BPX1 270 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 TOPORSQ9NS56 1045 aaPredicted RBP11.29□□□□□ -0.6
CALD1-203ENST00000393118 TBK1Q9UHD2 729 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 VAV3Q9UKW4 847 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 ZNF148Q9UQR1 794 aa11.29□□□□□ -0.6
CALD1-203ENST00000393118 HMGB1P1B2RPK0 211 aaPredicted RBP11.28□□□□□ -0.6
CALD1-203ENST00000393118 GOLGA8SH3BPF8 625 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 SFNP31947 248 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 DLG4P78352 724 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 CAPRIN2Q6IMN6 1127 aaKnown RBP11.28□□□□□ -0.6
CALD1-203ENST00000393118 CYP4F22Q6NT55 531 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 LPAR1Q92633 364 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 SLC5A5Q92911 643 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 KAT5Q92993 513 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 NSRP1Q9H0G5 558 aaKnown RBP11.28□□□□□ -0.6
CALD1-203ENST00000393118 ATP6V0A4Q9HBG4 840 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 CACNA1SQ13698 1873 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 PLIN4Q96Q06 1357 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 CAND2O75155 1236 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 SGPL1O95470 568 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 VIL1P09327 827 aaKnown RBP11.28□□□□□ -0.6
CALD1-203ENST00000393118 TMEM253P0C7T8 217 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 COMTP21964 271 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 RARRES1P49788 294 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 RRP1BQ14684 758 aaKnown RBP11.28□□□□□ -0.6
CALD1-203ENST00000393118 CCDC137Q6PK04 289 aaKnown RBP11.28□□□□□ -0.6
CALD1-203ENST00000393118 SPATS2Q86XZ4 545 aaKnown RBP11.28□□□□□ -0.6
CALD1-203ENST00000393118 SLC17A8Q8NDX2 589 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 MCPH1Q8NEM0 835 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 SYTL5Q8TDW5 730 aaPredicted RBP11.28□□□□□ -0.6
CALD1-203ENST00000393118 MIEF2Q96C03 454 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 CDHR1Q96JP9 859 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 ATP6V1G3Q96LB4 118 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 KCND2Q9NZV8 630 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 SYNGAP1Q96PV0 1343 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 TMEM191BP0C7N4 346 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 ITGB5P18084 799 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 SEC24CP53992 1094 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 CCDC6Q16204 474 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 SPDYE2Q495Y8 402 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 SWT1Q5T5J6 900 aaKnown RBP11.28□□□□□ -0.6
CALD1-203ENST00000393118 IRF2BP2Q7Z5L9 587 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.28□□□□□ -0.6
CALD1-203ENST00000393118 RBM46Q8TBY0 533 aaKnown RBP11.28□□□□□ -0.6
CALD1-203ENST00000393118 CPA5Q8WXQ8 436 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 JPH1Q9HDC5 661 aaPredicted RBP11.28□□□□□ -0.6
CALD1-203ENST00000393118 PPP1R9AQ9ULJ8 1098 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 IRS2Q9Y4H2 1338 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 ANKRD36CQ5JPF3 1778 aa11.28□□□□□ -0.6
CALD1-203ENST00000393118 MIF4GDA9UHW6 222 aaKnown RBP11.27□□□□□ -0.6
CALD1-203ENST00000393118 ATP2A1O14983 1001 aa11.27□□□□□ -0.6
CALD1-203ENST00000393118 PLSCR1O15162 318 aa11.27□□□□□ -0.6
CALD1-203ENST00000393118 MEFVO15553 781 aaPredicted RBP11.27□□□□□ -0.6
CALD1-203ENST00000393118 ATF2P15336 505 aa11.27□□□□□ -0.6
CALD1-203ENST00000393118 PPP2R5CQ13362 524 aa11.27□□□□□ -0.6
CALD1-203ENST00000393118 SIAH1Q8IUQ4 282 aa11.27□□□□□ -0.6
CALD1-203ENST00000393118 THNSL1Q8IYQ7 743 aa11.27□□□□□ -0.6
CALD1-203ENST00000393118 VTI1AQ96AJ9 217 aa11.27□□□□□ -0.6
CALD1-203ENST00000393118 HAUS1Q96CS2 278 aa11.27□□□□□ -0.6
CALD1-203ENST00000393118 FAM84AQ96KN4 292 aa11.27□□□□□ -0.6
CALD1-203ENST00000393118 FAM118BQ9BPY3 351 aa11.27□□□□□ -0.6
CALD1-203ENST00000393118 SLITRK6Q9H5Y7 841 aa11.27□□□□□ -0.6
CALD1-203ENST00000393118 NRBP2Q9NSY0 501 aa11.27□□□□□ -0.6
CALD1-203ENST00000393118 TAS2R14Q9NYV8 317 aa11.27□□□□□ -0.6
CALD1-203ENST00000393118 TIAM2Q8IVF5 1701 aa11.27□□□□□ -0.61
CALD1-203ENST00000393118 H0YCG3 227 aa11.27□□□□□ -0.61
CALD1-203ENST00000393118 SYF2O95926 243 aaKnown RBP11.27□□□□□ -0.61
CALD1-203ENST00000393118 SETSIPP0DME0 302 aa11.27□□□□□ -0.61
CALD1-203ENST00000393118 SEZ6Q53EL9 994 aa11.27□□□□□ -0.61
CALD1-203ENST00000393118 NBPF12Q5TAG4 269 aaPredicted RBP11.27□□□□□ -0.61
CALD1-203ENST00000393118 PARP9Q8IXQ6 854 aa11.27□□□□□ -0.61
CALD1-203ENST00000393118 AENQ8WTP8 325 aaKnown RBP11.27□□□□□ -0.61
CALD1-203ENST00000393118 DHX38Q92620 1227 aaKnown RBP11.27□□□□□ -0.61
CALD1-203ENST00000393118 NKIRAS1Q9NYS0 192 aa11.27□□□□□ -0.61
CALD1-203ENST00000393118 ADAM22Q9P0K1 906 aa11.27□□□□□ -0.61
CALD1-203ENST00000393118 KIF3CO14782 793 aa11.27□□□□□ -0.61
CALD1-203ENST00000393118 AP1G2O75843 785 aa11.27□□□□□ -0.61
CALD1-203ENST00000393118 CYP3A4P08684 503 aa11.27□□□□□ -0.61
CALD1-203ENST00000393118 DESP17661 470 aa11.27□□□□□ -0.61
CALD1-203ENST00000393118 GMPSP49915 693 aaPredicted RBP11.27□□□□□ -0.61
CALD1-203ENST00000393118 BPIFB4P59827 614 aa11.27□□□□□ -0.61
CALD1-203ENST00000393118 LACTBP83111 547 aaPredicted RBP11.27□□□□□ -0.61
CALD1-203ENST00000393118 ZNF662Q6ZS27 426 aa11.27□□□□□ -0.61
CALD1-203ENST00000393118 NLRP4Q96MN2 994 aa11.27□□□□□ -0.61
CALD1-203ENST00000393118 P2RX7Q99572 595 aaKnown RBP11.27□□□□□ -0.61
CALD1-203ENST00000393118 MRIQ9BWK5 157 aa11.27□□□□□ -0.61
CALD1-203ENST00000393118 INTS9Q9NV88 658 aaKnown RBP11.27□□□□□ -0.61
CALD1-203ENST00000393118 SUCLA2Q9P2R7 463 aaPredicted RBP11.27□□□□□ -0.61
CALD1-203ENST00000393118 SLC9A2Q9UBY0 812 aa11.27□□□□□ -0.61
CALD1-203ENST00000393118 PNMA2Q9UL42 364 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms