RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 SLC1A1P43005 524 aa13.91□□□□□ -0.18
LCA5-202ENST00000392959 IRAK1P51617 712 aa13.91□□□□□ -0.18
LCA5-202ENST00000392959 KIAA1841Q6NSI8 718 aa13.91□□□□□ -0.18
LCA5-202ENST00000392959 GPD1LQ8N335 351 aa13.91□□□□□ -0.18
LCA5-202ENST00000392959 GIMAP8Q8ND71 665 aaPredicted RBP13.91□□□□□ -0.18
LCA5-202ENST00000392959 ENGASEQ8NFI3 743 aa13.91□□□□□ -0.18
LCA5-202ENST00000392959 PRMT1Q99873 361 aaKnown RBP13.91□□□□□ -0.18
LCA5-202ENST00000392959 FSD1LQ9BXM9 530 aa13.91□□□□□ -0.18
LCA5-202ENST00000392959 RGL1Q9NZL6 768 aa13.91□□□□□ -0.18
LCA5-202ENST00000392959 SLC4A7Q9Y6M7 1214 aa13.91□□□□□ -0.18
LCA5-202ENST00000392959 SLC16A3O15427 465 aaKnown RBP13.91□□□□□ -0.18
LCA5-202ENST00000392959 E2F6O75461 281 aa13.91□□□□□ -0.18
LCA5-202ENST00000392959 CHN1P15882 459 aa13.91□□□□□ -0.18
LCA5-202ENST00000392959 CEP55Q53EZ4 464 aa13.91□□□□□ -0.18
LCA5-202ENST00000392959 FAM102AQ5T9C2 384 aaPredicted RBP13.91□□□□□ -0.18
LCA5-202ENST00000392959 MARCH10Q8NA82 808 aaPredicted RBP13.91□□□□□ -0.18
LCA5-202ENST00000392959 SPDYE1Q8NFV5 336 aaPredicted RBP13.91□□□□□ -0.18
LCA5-202ENST00000392959 SLC35G2Q8TBE7 412 aa13.91□□□□□ -0.18
LCA5-202ENST00000392959 POLR3CQ9BUI4 534 aaPredicted RBP13.91□□□□□ -0.18
LCA5-202ENST00000392959 EIF2AQ9BY44 585 aaKnown RBP13.91□□□□□ -0.18
LCA5-202ENST00000392959 QTRT2Q9H974 415 aaKnown RBP13.91□□□□□ -0.18
LCA5-202ENST00000392959 ADA2Q9NZK5 511 aa13.91□□□□□ -0.18
LCA5-202ENST00000392959 SUCLA2Q9P2R7 463 aaPredicted RBP13.91□□□□□ -0.18
LCA5-202ENST00000392959 UVRAGQ9P2Y5 699 aa13.91□□□□□ -0.18
LCA5-202ENST00000392959 GGT7Q9UJ14 662 aa13.91□□□□□ -0.18
LCA5-202ENST00000392959 PHF20L1A8MW92 1017 aa13.91□□□□□ -0.18
LCA5-202ENST00000392959 CREB3O43889 395 aa13.91□□□□□ -0.18
LCA5-202ENST00000392959 CDH6P55285 790 aa13.91□□□□□ -0.18
LCA5-202ENST00000392959 ANTXR2P58335 489 aa13.91□□□□□ -0.18
LCA5-202ENST00000392959 POU5F1BQ06416 359 aa13.91□□□□□ -0.18
LCA5-202ENST00000392959 HABP4Q5JVS0 413 aaKnown RBP13.91□□□□□ -0.18
LCA5-202ENST00000392959 PRPF38AQ8NAV1 312 aaKnown RBP13.91□□□□□ -0.18
LCA5-202ENST00000392959 NSUN4Q96CB9 384 aaKnown RBP13.91□□□□□ -0.18
LCA5-202ENST00000392959 GCOM2Q9BZD3 368 aaPredicted RBP13.91□□□□□ -0.18
LCA5-202ENST00000392959 APEX2Q9UBZ4 518 aa13.91□□□□□ -0.18
LCA5-202ENST00000392959 SMG5Q9UPR3 1016 aaKnown RBP13.91□□□□□ -0.18
LCA5-202ENST00000392959 COL15A1P39059 1388 aa13.91□□□□□ -0.18
LCA5-202ENST00000392959 HUS1O60921 280 aa13.9□□□□□ -0.18
LCA5-202ENST00000392959 SNRNP48Q6IEG0 339 aaKnown RBP13.9□□□□□ -0.18
LCA5-202ENST00000392959 SYDE1Q6ZW31 735 aaPredicted RBP13.9□□□□□ -0.18
LCA5-202ENST00000392959 RHPN2Q8IUC4 686 aa13.9□□□□□ -0.18
LCA5-202ENST00000392959 CDKL3Q8IVW4 592 aaPredicted RBP13.9□□□□□ -0.18
LCA5-202ENST00000392959 XPO6Q96QU8 1125 aaKnown RBP13.9□□□□□ -0.18
LCA5-202ENST00000392959 AGO2Q9UKV8 859 aaKnown RBP13.9□□□□□ -0.18
LCA5-202ENST00000392959 USP15Q9Y4E8 981 aaPredicted RBP13.9□□□□□ -0.18
LCA5-202ENST00000392959 PGM1P36871 562 aa13.9□□□□□ -0.18
LCA5-202ENST00000392959 OCA2Q04671 838 aa13.9□□□□□ -0.18
LCA5-202ENST00000392959 IL25Q9H293 177 aa13.9□□□□□ -0.18
LCA5-202ENST00000392959 TAF6LQ9Y6J9 622 aa13.9□□□□□ -0.18
LCA5-202ENST00000392959 MYMKA6NI61 221 aa13.9□□□□□ -0.18
LCA5-202ENST00000392959 PHF2O75151 1096 aa13.9□□□□□ -0.18
LCA5-202ENST00000392959 ITIH2P19823 946 aa13.9□□□□□ -0.18
LCA5-202ENST00000392959 CARSP49589 748 aaKnown RBP13.9□□□□□ -0.18
LCA5-202ENST00000392959 TAP1Q03518 808 aa13.9□□□□□ -0.18
LCA5-202ENST00000392959 NAB2Q15742 525 aa13.9□□□□□ -0.18
LCA5-202ENST00000392959 RTKN2Q8IZC4 609 aa13.9□□□□□ -0.18
LCA5-202ENST00000392959 TTC39CQ8N584 583 aa13.9□□□□□ -0.18
LCA5-202ENST00000392959 ICA1LQ8NDH6 482 aa13.9□□□□□ -0.18
LCA5-202ENST00000392959 NCLNQ969V3 563 aa13.9□□□□□ -0.18
LCA5-202ENST00000392959 STAMBPL1Q96FJ0 436 aa13.9□□□□□ -0.18
LCA5-202ENST00000392959 C9orf72Q96LT7 481 aa13.9□□□□□ -0.18
LCA5-202ENST00000392959 C2orf40Q9H1Z8 148 aa13.9□□□□□ -0.18
LCA5-202ENST00000392959 ZNF302Q9NR11 478 aa13.9□□□□□ -0.18
LCA5-202ENST00000392959 HOXC10Q9NYD6 342 aa13.9□□□□□ -0.18
LCA5-202ENST00000392959 TET3O43151 1660 aa13.9□□□□□ -0.18
LCA5-202ENST00000392959 ADCY10Q96PN6 1610 aa13.9□□□□□ -0.18
LCA5-202ENST00000392959 ARHGAP10A1A4S6 786 aa13.9□□□□□ -0.18
LCA5-202ENST00000392959 HNRNPCL1O60812 293 aaKnown RBP13.9□□□□□ -0.18
LCA5-202ENST00000392959 EDRF1Q3B7T1 1238 aa13.9□□□□□ -0.18
LCA5-202ENST00000392959 ARHGAP18Q8N392 663 aa13.9□□□□□ -0.18
LCA5-202ENST00000392959 TTC8Q8TAM2 541 aa13.9□□□□□ -0.18
LCA5-202ENST00000392959 HNRNPLLQ8WVV9 542 aaKnown RBP13.9□□□□□ -0.18
LCA5-202ENST00000392959 RBM15Q96T37 977 aaKnown RBP eCLIP13.9□□□□□ -0.18
LCA5-202ENST00000392959 POLR3FQ9H1D9 316 aaPredicted RBP13.9□□□□□ -0.18
LCA5-202ENST00000392959 TUFT1Q9NNX1 390 aa13.9□□□□□ -0.18
LCA5-202ENST00000392959 ALG13Q9NP73 1137 aaKnown RBP13.9□□□□□ -0.18
LCA5-202ENST00000392959 CTDNEP1O95476 244 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 ARHGDIAP52565 204 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 DYNC1I2Q13409 638 aaKnown RBP13.89□□□□□ -0.19
LCA5-202ENST00000392959 DUOXA2Q1HG44 320 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 AGBL2Q5U5Z8 902 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 ARMC2Q8NEN0 867 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 IL17RAQ96F46 866 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 SGSM3Q96HU1 749 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 OLFM3Q96PB7 478 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 KIFC3Q9BVG8 833 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 MRPL4Q9BYD3 311 aaKnown RBP13.89□□□□□ -0.19
LCA5-202ENST00000392959 DHX35Q9H5Z1 703 aaKnown RBP13.89□□□□□ -0.19
LCA5-202ENST00000392959 SMARCAL1Q9NZC9 954 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 PREX2Q70Z35 1606 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 RASSF10A6NK89 507 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 CIITAP33076 1130 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 FMO5P49326 533 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 ACTR2P61160 394 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 ZBTB41Q5SVQ8 909 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 OR2W6PQ8NHA6 318 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 PARD3BQ8TEW8 1205 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 ZIM3Q96PE6 472 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 PLA2G12BQ9BX93 195 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 MAGEB5Q9BZ81 275 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms