RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 HEY1Q9Y5J3 304 aa17.66■□□□□ 0.42
SCN3B-202ENST00000392770 NAA30Q147X3 362 aaPredicted RBP17.66■□□□□ 0.42
SCN3B-202ENST00000392770 C6orf118Q5T5N4 469 aa17.66■□□□□ 0.42
SCN3B-202ENST00000392770 ILDR1Q86SU0 546 aaPredicted RBP17.66■□□□□ 0.42
SCN3B-202ENST00000392770 SLC30A5Q8TAD4 765 aa17.66■□□□□ 0.42
SCN3B-202ENST00000392770 KLC2Q9H0B6 622 aa17.66■□□□□ 0.42
SCN3B-202ENST00000392770 CELF2O95319 508 aaKnown RBP17.66■□□□□ 0.42
SCN3B-202ENST00000392770 SLC4A1P02730 911 aa17.66■□□□□ 0.42
SCN3B-202ENST00000392770 EFCAB12Q6NXP0 572 aa17.66■□□□□ 0.42
SCN3B-202ENST00000392770 SCN4BQ8IWT1 228 aa17.66■□□□□ 0.42
SCN3B-202ENST00000392770 PDIK1LQ8N165 341 aa17.66■□□□□ 0.42
SCN3B-202ENST00000392770 ZNF560Q96MR9 790 aa17.66■□□□□ 0.42
SCN3B-202ENST00000392770 ESYT3A0FGR9 886 aa17.66■□□□□ 0.42
SCN3B-202ENST00000392770 EXTL3O43909 919 aa17.66■□□□□ 0.42
SCN3B-202ENST00000392770 HOXA10P31260 410 aaPredicted RBP17.66■□□□□ 0.42
SCN3B-202ENST00000392770 THOC5Q13769 683 aaKnown RBP17.66■□□□□ 0.42
SCN3B-202ENST00000392770 NCOA4Q13772 614 aa17.66■□□□□ 0.42
SCN3B-202ENST00000392770 SEPT6Q14141 434 aa17.66■□□□□ 0.42
SCN3B-202ENST00000392770 CYP26B1Q9NR63 512 aa17.66■□□□□ 0.42
SCN3B-202ENST00000392770 CCDC160A6NGH7 325 aa17.65■□□□□ 0.42
SCN3B-202ENST00000392770 TMEM62Q0P6H9 643 aa17.65■□□□□ 0.42
SCN3B-202ENST00000392770 ZKSCAN8Q15776 578 aaPredicted RBP17.65■□□□□ 0.42
SCN3B-202ENST00000392770 TEX2Q8IWB9 1127 aa17.65■□□□□ 0.42
SCN3B-202ENST00000392770 CCDC197Q8NCU1 140 aa17.65■□□□□ 0.42
SCN3B-202ENST00000392770 EFCC1Q9HA90 598 aa17.65■□□□□ 0.42
SCN3B-202ENST00000392770 NRXN3Q9Y4C0 1643 aa17.65■□□□□ 0.42
SCN3B-202ENST00000392770 PARP4Q9UKK3 1724 aaKnown RBP17.65■□□□□ 0.42
SCN3B-202ENST00000392770 HMGB1P1B2RPK0 211 aaPredicted RBP17.65■□□□□ 0.42
SCN3B-202ENST00000392770 SART1O43290 800 aaKnown RBP17.65■□□□□ 0.42
SCN3B-202ENST00000392770 CHRNA3P32297 505 aa17.65■□□□□ 0.42
SCN3B-202ENST00000392770 TFDP2Q14188 446 aa17.65■□□□□ 0.42
SCN3B-202ENST00000392770 WDR72Q3MJ13 1102 aa17.65■□□□□ 0.42
SCN3B-202ENST00000392770 AGAP1Q9UPQ3 857 aa17.65■□□□□ 0.42
SCN3B-202ENST00000392770 FKBP1AP62942 108 aaKnown RBP17.65■□□□□ 0.42
SCN3B-202ENST00000392770 PCGF5Q86SE9 256 aa17.65■□□□□ 0.42
SCN3B-202ENST00000392770 AKT1S1Q96B36 256 aa17.65■□□□□ 0.42
SCN3B-202ENST00000392770 PPP1R9AQ9ULJ8 1098 aa17.65■□□□□ 0.42
SCN3B-202ENST00000392770 NALCNQ8IZF0 1738 aa17.65■□□□□ 0.42
SCN3B-202ENST00000392770 TBX20Q9UMR3 447 aa17.65■□□□□ 0.42
SCN3B-202ENST00000392770 AK9Q5TCS8 1911 aa17.65■□□□□ 0.42
SCN3B-202ENST00000392770 CREB3O43889 395 aa17.65■□□□□ 0.42
SCN3B-202ENST00000392770 SUN1O94901 812 aa17.65■□□□□ 0.42
SCN3B-202ENST00000392770 TAP1Q03518 808 aa17.65■□□□□ 0.42
SCN3B-202ENST00000392770 GRIK5Q16478 980 aa17.65■□□□□ 0.42
SCN3B-202ENST00000392770 ATF7IP2Q5U623 682 aa17.65■□□□□ 0.42
SCN3B-202ENST00000392770 PCNX4Q63HM2 1172 aa17.65■□□□□ 0.42
SCN3B-202ENST00000392770 ZFYVE28Q9HCC9 887 aa17.65■□□□□ 0.42
SCN3B-202ENST00000392770 GOLGA8MH3BSY2 632 aa17.64■□□□□ 0.42
SCN3B-202ENST00000392770 GSTA1P08263 222 aa17.64■□□□□ 0.42
SCN3B-202ENST00000392770 KRT7P08729 469 aa17.64■□□□□ 0.42
SCN3B-202ENST00000392770 GSTA2P09210 222 aa17.64■□□□□ 0.42
SCN3B-202ENST00000392770 SCP2P22307 547 aa17.64■□□□□ 0.42
SCN3B-202ENST00000392770 TMEM132DQ14C87 1099 aa17.64■□□□□ 0.42
SCN3B-202ENST00000392770 ZFPM1Q8IX07 1006 aa17.64■□□□□ 0.42
SCN3B-202ENST00000392770 MKNK1Q9BUB5 465 aa17.64■□□□□ 0.42
SCN3B-202ENST00000392770 KATNAL1Q9BW62 490 aa17.64■□□□□ 0.42
SCN3B-202ENST00000392770 TMEM8AQ9HCN3 771 aa17.64■□□□□ 0.42
SCN3B-202ENST00000392770 PXMP2Q9NR77 195 aa17.64■□□□□ 0.42
SCN3B-202ENST00000392770 SNX12Q9UMY4 172 aa17.64■□□□□ 0.42
SCN3B-202ENST00000392770 LCP1P13796 627 aa17.64■□□□□ 0.41
SCN3B-202ENST00000392770 CYP2B6P20813 491 aa17.64■□□□□ 0.41
SCN3B-202ENST00000392770 ELF1P32519 619 aa17.64■□□□□ 0.41
SCN3B-202ENST00000392770 GALCP54803 685 aa17.64■□□□□ 0.41
SCN3B-202ENST00000392770 KLHDC7AQ5VTJ3 777 aa17.64■□□□□ 0.41
SCN3B-202ENST00000392770 C9orf131Q5VYM1 1079 aa17.64■□□□□ 0.41
SCN3B-202ENST00000392770 GJB7Q6PEY0 223 aa17.64■□□□□ 0.41
SCN3B-202ENST00000392770 MS4A14Q96JA4 679 aa17.64■□□□□ 0.41
SCN3B-202ENST00000392770 TRIM56Q9BRZ2 755 aaKnown RBP17.64■□□□□ 0.41
SCN3B-202ENST00000392770 KBTBD4Q9NVX7 518 aa17.64■□□□□ 0.41
SCN3B-202ENST00000392770 RGPD8O14715 1765 aaPredicted RBP17.64■□□□□ 0.41
SCN3B-202ENST00000392770 GOLGA8CPA6NN73 597 aa17.64■□□□□ 0.41
SCN3B-202ENST00000392770 NFIBO00712 420 aa17.64■□□□□ 0.41
SCN3B-202ENST00000392770 MAGEB2O15479 319 aa17.64■□□□□ 0.41
SCN3B-202ENST00000392770 ARL4CP56559 192 aa17.64■□□□□ 0.41
SCN3B-202ENST00000392770 PIK3R2O00459 728 aa17.64■□□□□ 0.41
SCN3B-202ENST00000392770 CDC42EP1Q00587 391 aa17.64■□□□□ 0.41
SCN3B-202ENST00000392770 RPS6KA2Q15349 733 aa17.64■□□□□ 0.41
SCN3B-202ENST00000392770 FAM83AQ86UY5 434 aa17.64■□□□□ 0.41
SCN3B-202ENST00000392770 HVCN1Q96D96 273 aa17.64■□□□□ 0.41
SCN3B-202ENST00000392770 LRRC4BQ9NT99 713 aa17.64■□□□□ 0.41
SCN3B-202ENST00000392770 ERAP1Q9NZ08 941 aa17.64■□□□□ 0.41
SCN3B-202ENST00000392770 GGCXP38435 758 aa17.64■□□□□ 0.41
SCN3B-202ENST00000392770 GIT2Q14161 759 aa17.64■□□□□ 0.41
SCN3B-202ENST00000392770 C1orf54Q8WWF1 131 aa17.64■□□□□ 0.41
SCN3B-202ENST00000392770 AGPAT3Q9NRZ7 376 aa17.64■□□□□ 0.41
SCN3B-202ENST00000392770 PLSCR1O15162 318 aa17.63■□□□□ 0.41
SCN3B-202ENST00000392770 PMS2P54278 862 aa17.63■□□□□ 0.41
SCN3B-202ENST00000392770 NME3Q13232 169 aa17.63■□□□□ 0.41
SCN3B-202ENST00000392770 SGSM1Q2NKQ1 1148 aa17.63■□□□□ 0.41
SCN3B-202ENST00000392770 CCDC137Q6PK04 289 aaKnown RBP17.63■□□□□ 0.41
SCN3B-202ENST00000392770 C15orf52Q6ZUT6 534 aaKnown RBP17.63■□□□□ 0.41
SCN3B-202ENST00000392770 NAB2Q15742 525 aa17.63■□□□□ 0.41
SCN3B-202ENST00000392770 ANKS1AQ92625 1134 aa17.63■□□□□ 0.41
SCN3B-202ENST00000392770 RBBP8NLQ8NC74 664 aaPredicted RBP17.63■□□□□ 0.41
SCN3B-202ENST00000392770 FAM163AQ96GL9 167 aaPredicted RBP17.63■□□□□ 0.41
SCN3B-202ENST00000392770 RNPC3Q96LT9 517 aaKnown RBP17.63■□□□□ 0.41
SCN3B-202ENST00000392770 TTC7AQ9ULT0 858 aaPredicted RBP17.63■□□□□ 0.41
SCN3B-202ENST00000392770 ASAP2O43150 1006 aa17.63■□□□□ 0.41
SCN3B-202ENST00000392770 IER5Q5VY09 327 aa17.63■□□□□ 0.41
SCN3B-202ENST00000392770 SCFD2Q8WU76 684 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms